Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                               <-------                                                                                          --------->ATHB51                                                                                 --------->YAB1                                                                       --------->ICU4     <---------ICU4                                                   <---------HSFB2a(2) <---------YAB1     <--------ATHB1                                                   --------->HSFB2a(2) ------>ZmHOX2a(1)  <--------HAHB4         -------->P                           <---------ANAC58        --------->TOE2(3)   --------->YAB1 ----AHL20(2)                        --------------------->WRI1     <---------ATHB12     --------->AHL20(2) ---AHL20(2)               <---------PCF2     <---------ANAC58     --------->ARR14(2)    --------->ICU4 -->AHL20(2)               <---------PCF5<xxxxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)       <---------ATHB12 ---AHL20(1)   <---------ARR11(3)    <----------DOF2               <---------ARR14(2)    <---------ATHB51   ttttgtagacttaccaagatagttgaatgggacctcttcctttgtaagacttgccagaaacacaaggccaatccttattagaagcatcacaataattact  733100                                                                 --------->AtMYB61                                                                 ======================MYC_MYB                                                                --------->MYB46(3)                                                                <---------MYB55(2)                                                               -------->P                                                               ------>MYB83                                                               ========================MYC_MYB                                                               ------>MYB46(1)                                                           --------->PCF5                                                        --------->ATERF1(1)                                                        --------->ALFIN1                                                       --------->LBD16               --------->ARR14(2)                                                      <---------bZIP60(2)            --------->ARR11(3)                                                      <---------O2                   <---------ARR14(2)                                                      <---------TGA1a                <---------ARR11(3)                                                      --------->O2           --------->TGA1a                                                      <---------ANAC46       <---------TGA1a                                                      <---------ANAC58       <---------O2          --                                                      <---------ANAC58       --------->O2  ----------                                                <---------MYB46(3)           <---------ANAC58      --                                                ===============================RAV  --------->GLK1(1)                                              ----------->RAV1(2)<---------ALFIN1   <---------GLK1(1)                                              <---------MYB52(1)<---------MYB111(2) --------->RVE1(1)                                      <-------MYC3    ===================MYC_MYB   <---------ARR11(3)               =================================================bZIP_DOF     ========================               <----------DOF2        ------->MYC3   <------NtERF2           <---------ANAC46      -- <---------ZAT18                 --------->ANAC58   ------>NtERF2------->GAMYB     --------->ARR11(3) --------->ZAT14                 --------->ANAC46--------->At4g35610         <---------ANAC58    ---- <---------ZAT14                 --------->ANAC58<---------At4g35610 <-----------RAV1(1)   ------>NtERF2 ----GT1     ------>ZmHOX2a(1) <---------ALFIN1 <-----------RAV1(1)----------->RAV1(2)    --------->ANAC46   ctgtggactcacttcctctttaaaacacaatccccacgcatatggtccgtctggtgccgtggcccaaccacctgttgtctcgtgagatatctgcgccaaa  733200                                                            ------>ZmHOX2a(2)                                                           <------ZmHOX2a(2)                                                          <---------ARR11(3)                                                          --------->ARR11(3)                                                          --------->GLK1(2)                                                          --------->ARR14(3)                                                          <---------ARR14(3)                                                          <---------ARR14(2)              --------->ATERF1(1)                  <---------HSFB2a(2)              <------NtERF2                        --------->HSFB2a(2)             <---------ATERF1(1)                  <---------LBD16       <---------O2                              <---------LBD16         --------->ANAC58       --------->O2                          --------->ARR14(2)          --------->ANAC46     <---------ALFIN1                      --------->LBD16--------->ARR14(2)   ------>NtERF2                          --------->HSFB2a(2)            --------->ANAC58  --------->RAP2.3(3)                --------->ANAC58    <------ZmHOX2a(1)  --------->DEAR3(1)                 --------->ANAC46   --------->HSFC1(2) ------->ANAC58           ---------->DOF2 <---------HSFB2a(2)           --------->LBD16 ->RAV1(1)   <-----------HVH21       --------->ANAC58   <---------HSFC1(2) ------->ANAC58  <------NtERF2      <---------TOE1(2)   <---------HSFB2a(1)                       <-- =======bZIP_DOF------>NtERF2      ===============================HOX2a_HOX2a                    <--- ------->ANAC46--------->DEAR3(1)  ================================HOX2a_HOX2a   <-------TEIL <------ ------>DOF2--------->ANAC46       ------>ZmHOX2a(1)    --------->HSFB2a(1)---------->DOF2<--------P   aacgcagccacttcgcgtcgccttgtccaaaagtttcctacgctcccgaacttcgggaaggatcttgtagcctccacgaaagcttcataggggtagaaac  733300                                       <------MYB46(1)                         --------->LBD16                                       <------MYB83                           <---------ANAC58                                      <---------AtMYB61                       <---------ANAC58                                      --------->MYB59                        --------->ABI4(2)                                    --------->ARR14(1)                       <---------LBD16                                    --------->CCA1(2)                       --------->ALFIN1                                   --------->ARR14(2)                     <---------DEAR3(2)        <---------ANAC58           <---------ARR11(3)                    ------>ZmHOX2a(2)        <---------ANAC58           <---------ARR14(2)                    <---------DEAR3(1)   <---------AtLEC2    ------>ZmHOX2a(1)                              --------->ATHB12 --------DOF2  <---------MYB46(3)  --------->ARR11(3)                <---------YAB1       <---------AHL20(2) ------DAG2 <---------ANAC58       --------->ARR11(1)             <-------TEIL<---------ANAC46 -----GT1   <---------ANAC58     ----------->ARR10 --------->ARR11(3)--------->ICU4      <---------YAB1   cttttgcagggcatgcgttgttgtccttgtggatgaagatttggtcgtagagagttcttgggactaggctcatgatcggtgcgggtttatatttattgtg  733400                             --------->ARR11(3)              <---------AtLEC2                                                              <--------              <---------ANAC46                                                           ---------->ID1    --------->ZAT2           <---------ARR11(3)     <---------ZAT14                 --------->ARR14(2)    <---------ZAT2       <------ZmHOX2a(1)      <------ZmHOX2a(1)             <-----------GT1   ttttcgagcttcggtttcatggagagaggatgatattgagaagatgaagaggagtagacagagcaatagagagatttgtttctccatatttgttcttttt  733500                                                                             --------->ANAC55(2)             ----------->ARR10                                               <---------ANAC55(2)      <---------ANAC46                                                       <---------ANAC55(1)      <---------ANAC58                                                      <-------TEIL      <---------ANAC58          ---------->ID1                 --------->ZAT18    <---------ANAC46        <----------DOF2                    <---------ZAT18 --DOF2   *TSS --------->ARR11(3)   <-----------TBP   <---------REM1(1)    <-----------GT1<---------AtMYB61   tgtgttttgtgtgagaagatgtggttttggctttgttgttatatagagtcatagagatgtagtagtggacgacttagttacatgtttttgttttggtcta  733600                                                        <---------TOE1(3)                                                  --------->ATHB51                                                  -------->ATHB1                                                  <--------HAHB4                           <---------DAG2         --------->AHL20(2)                  ----------->GT1                 <---------AHL20(2)                <---------ZAT18<---------AHL20(2)<---------ATHB12      <----------DOF2      <----------DOF2       <---------ATHB51    <----------DOF2 --------->GLK1(1)      <---------DAG2    <-----------GT1          --------->ICU4--------->KAN4(2)   <------ZmHOX2a(1)-   <-----------GT1<---------ANAC46 <---------AHL20(2)   <---------TOE2(3)<---------YAB1        ------   cgttttgactttttttagtggagtttatactttttattttatatagttgcaattatttaagggtttattctctttttcattgttaggagacccattcctc  733700                                                            ----------->HVH21                                             --------->ATHB12                                           <---------------AGL15                                           --------------->AGL15                                          <-----------------AGL2          <-----------GT1                 <-----------------AG      <----------DOF2                     <-----------------AGL1                       --------->ZAT18 ----->ZmHOX2a(1)        <----------DOF2<---------YAB1    <---------AtLEC2         --------->DAG2 >ZmHOX2a(1)      <---------AHL20(2) <-------TEIL        <-------TEIL             ---------->DOF2   tccttcttcttttttctcattttttttctttcaagaagattcattcttgatttggaaaatgcatgacatatatttcaaaccagataaagtgaaccatttc  733800                                                                                    ------>MYB83                                                                                    ------>MYB46(1)                                                                                -------->P         --                                                                         <------MYB46(1)           --                                                                         <------MYB83              --                                                                         --------->HSFC1(2)        <-                   --------->TOE2(3)              --------->ALFIN1       <---------HSFC1(2)        <-                   --------->YAB1               <-----------RAV1(1)      --------->HSFB2a(1)       <-                  ----------->GT1              <---------TOE2(3)         ----------->GT1      <------                 <---------TOE2(3)          <---------AHL20(2)           <---------HSFB2a(1)---------                --------->YAB1              --------->AHL20(2)          <---------------AtSPL8-------           --------->AHL20(2)              --------->YAB1         <----------DOF2 <---------MYB59 ---   agtctgaattcaattgaataatgttaatatgaagaccaagttgaattttaatgtggggaattaagcttctttggaaggtactaaccaaattcaaatataa  733900 ------->AHL20(2) ------->ARR11(3) ------->AHL20(1) --------ARR11(3)                       --------->ICU4 --------AHL20(2)                    --------->AHL20(2)     --------->ALFIN1 --------AHL20(1)             <---------ICU4             --------->DAG2 ---AHL20(2)                 --------->ICU4  <---------AHL20(2) >YAB1                      <---------------AGL15--------->AHL20(2)                     <---------YAB1 -->AHL20(2)              <---------AHL20(2)--------->AHL20(2)                    <-------TEIL ------>AHL20(2)    --------->YAB1 ----------->GT1      ---------->DOF2    --------->YAB1   atatattctttgaaaatttgaaacataattcattatgaagtaaatattaaataaaacagaaagtgttccatactgaattatagtttcattttgaatacta  734000  Previous    Next  AGI:  At4g01700.1    Description:  chitinase, putative. similar to chitinase, putative [Arabidopsis thaliana] (TAIR:AT1G02360.1); similar to chitinase (class II) [Arachis hypogaea] (GB:CAA57773.1); contains InterPro domain Endochitinase (InterPro:IPR016283); contains InterPro domain Glycoside hydrolase, family 19, catalytic; (InterPro:IPR000726) Range:  from: 732313    to: 733510    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version