Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                               -------->HAHB4                                 <-----------GT1                             --------->YAB1                              <---------ICU4                             <---------ICU4                            <---------TOE2(3)                            --------->ICU4                           <---------AHL20(2)                       <------MYB46(1)                           --------->AHL20(1)        ----------->GT1----------->GT1                           <---------AHL20(1)   ---------->DOF2     <------MYB83 <----------DOF2              <---------AHL20(2) <---------YAB1       --------->MYB46(2)                         --------->AHL20(2)      <------MYB46(1) ------>AHL20(2)      --------->MYB59                        --------->AHL20(2)          <------MYB83 ------DOF2     ---------->DOF2   ------->TEIL             --------->ANAC55(2) --------->TOE2(3)----- ----DAG2----------->GT1    <---------ATHB51        <---------GLK1(2)--------->AHL20(2) --------->MYB59   tttattaaagaggtttaataaagtttggtaataatggactttgacttcaaactcgattctcatgtaattaattaatatttacatcaaaatttggtcacta  729500                                                                            --------->ANAC55(2)                                                                    --------->YAB1                                                                   <---------YAB1         <---------AHL20(2)                                      <---------ICU4         --------->AHL20(2)                                      --------->YAB1        --------->AHL20(2)                                      <---------YAB1             ----------      ------>MYB83                                --------------->AGL15     --------->ANAC58      ------>MYB46(1)                            ====================================================    <---------MYB59                              ----------------->AGL3     --------->ANAC46      ---   ----------------->AG--------->TOE2(3)     <---------ICU4     --------->ICU4        ---------------   ================================================================MADS_MADS--------->ANAC55(1)   --- <-----------GT1      ----------->GT1    --------->ZAT6    ----------->GT1  <---------ANAC55(2) ----- ---->YAB1--------->AHL20(2)         --------->AHL20(2)---------->DOF2      --------->ANAC58---------   atattaccaaattaatatactaaaatgttaattcgcaaataaaacactaattccaaataaagggtcattatgataaacacgtattgaacttgataaagca  729600     --------->AHL20(1)                                        --------->ARR11(3)    --------->YAB1                                             <---------ARR11(3) >DOF2<---------AHL20(2)<------MYB46(1)                <------MYB46(1) =MADS_MADS             <------MYB83                   <------MYB83 ------>ANAC58          ----------->GT1                ----------->GT1 >AGL15                <---------AtMYB61              --------->MYB59 ------>ANAC58    <---------TOE2(3)                   <---------AtMYB61 ----->DOF2       <---------TOE1(3)              <---------TOE2(3)            --------->YAB1  XXXXXXX >DAG2<---------ATHB51 --------->MYB59         ---------->DOF2<---------CCA1(2)          <-----------GT1   aagcaaaaataatgggtttcaaggtttggttatatatgacaaaaaaaaaaaaaggtttggttatatatctattgggcctataaccatgttataacaaatt  729700                                                                                                 <---                                                                                                 <---                        --------->ANAC58                                                     --------                        --------->ANAC55(1)                                                  --------                        --------->YAB1                                                       --------                <---------AHL20(2)                                                          ---------                <---------AHL20(1)                         --------->ZAT6                   ---------                --------->AHL20(2)                       ------>MYB83                   --------->ANAC46                --------->AHL20(1) <----------DOF2       ------>MYB46(1)                <------------             --------->YAB1--------->MYB52(1)         --------->ANAC46                  <------------           --------->AHL20(2)      ------>ZmHOX2a(1)  --------->ANAC58               --------->ARR14(2)          --------->YAB1--------->ANAC58              --------->ANAC58               <---------ARR14(2)    --------->MYB52(1)  --------->ANAC46         --------->WRKY18(1)             --------->DAG2  ----  <---------MYB59      <---------TOE2(3) <---------YAB1<---------MYB59          ---------->DOF2  <--- XXXXXXXXXXXXX>MIR865-5P--------->ANAC55(2)     <-----------HVH21         ---------->DOF2 <---------SPL7   tgggcctaactaaaataataaaataaacgtaatggtcctttttatatttgggtcaaacccaactctaaacccaaaccaaagaaaaagtatacggtacggt  729800                         ----------->GT1                         <---------At4g35610                         --------->At4g35610                       <-----------RAV1(2) ----TEIL           <---------WOX13(1) ------ZAT14       <------------CBF ------->AtSPL3   --------->ATHB12 ->ANAC58    <---------ANAC46 ->ANAC58    <---------ANAC58                                             <---------ARR14(2) >SPL1(2)    --------->ALFIN1                                             --------->ARR14(2) >SPL7     <---------ANAC58                                            ------------>CBF      -------- ---AtSPL8 <---------ANAC58                                           ----------------->AG   <------- ---AtSPL3 <---------ANAC46                             --------->At4g35610               ---------->DOF2 ----->ZAT14 <---------ANAC58                      <----------DOF2    ----------------->AGL1 -------- ------REM1(2)   <---------YAB1         ---------->ID1  <---------At4g35610            *TSS ---------   acacagacttatggtgtgtgtgattgcaggtgaatatttctcgtcgtcttctcctttcttctgaagaagattacccaatctgaaaaaaaccaagaagctg  729900         <---------ARR14(2)                        ------>NtERF2 ->At4g35610            <---------AtLEC2       ----------->HVH21 --At4g35610        --------->GLK1(1)         --------->SPL7                <---------HSFB2a(2) <---- ->ZAT2  --------->ARR14(2)                 <---------SPL7            <---------MYB52(1)       ------ >GLK1(2)<---------GLK1(2)                  <-----------HVH21        --------->LBD16  --------->ARR14(2)   acaaaattccgaattctctgcgatttccatggagttatctcttctccgtccgacgactcaatcgcttcttccgtcgttttcgaagcccaatctccgatta  730000                                                     --------->ARR14(2)                                                     <---------ARR11(3)                                                <-----------HVH21                                               --------->DEAR3(1)                                               ------->GAMYB                                              --------->MYB46(3)                                              <------------AtMYB77                                              --------->DEAR3(2)                                             ------>MYB83                                             ------>MYB46(1)                       <---------ALFIN1                                             -------->P                            --------->DEAR3(1)                                            --------->MYB55(1)                     --------->AtMYB61                                       <---------ETT(2)============================HOX2a_HOX2a                                       --------->WRKY38(1)                        --------->MYB46(3)                                      --------->ALFIN1--------->GLK1(1)           <------NtERF2                                     <---------MYB52(1)------>ZmHOX2a(2)       <------NtERF2                                    <---------DEAR3(2)=============================HOX2a_HOX2a                                   <---------DREB2C(2)<------ZmHOX2a(2)        --------->ATERF1(1)                                   <---------DEAR3(1)--------->ARR11(3)       <---------ATERF1(1)                                   <---------MYB46(3)<---------ARR11(1)     <------ZmHOX2a(1)                                  <---------ANAC46  <---------CCA1(2)     --------->ALFIN1                                  <---------ORA47(1)<---------ARR14(1)   <------NtERF2           <---                              <---------At4g35610  <---------DEAR3(2)    --------->ATERF1(1)     <---                           <---------ZAT14  --------->MYB52(1)         --------->ALFIN1<-----------HVH21       --------->ANAC46    --------->ZAT14 --------->AtMYB61          <---------LBD16 --------->AtMYB61 -----AHL20(2)         <---------MYB52(1)  --------->MYB46(3)         <-----------------------TaNAC69(2) --->AHL20(2)         <-------GAMYB--------->MYB55(2)<---------ARR14(2)<---------DEAR3(1)  --------->ANAC46   aatgtttataagcctcttagactccgttgttcagtggccggtggaccaaccgtcggatcttcaaaaatcgaaggcggaggaggcaccaccatcacgacgg  730100             <---------DEAR3(1)            <---------LBD16            <---------At4g35610            --------->At4g35610            --------->ATERF1(1)            <------NtERF2           <---------RAP2.3(1)           <---------ORA47(2)           <---------ERF1          <---------RRTF1(3)          <---------At1g77200          <---------DREB2C(2)          <---------RAP2.6(2)          <---------DEAR3(1)          <---------DEAR4(1)          <---------RAP2.3(3)          <---------RRTF1(2)          <---------RAP2.3(2)                                                   --------->AHL20(2)          --------->ETT(1)                                                      <---------AHL20(2)        <-----------HVH21                                              <---------ZAT2      <---------WOX13(1)                       --------->ATERF1(1)     <---------At4g35610   <---------YAB1                              <-------GAMYB           --------->At4g35610 <---------ANAC58                              <---------ANAC58        --------->ZAT2 <---------ANAC46                              <---------ANAC58     <---------At4g35610----------->HVH21 <---------ANAC58         <---------ZAT18<-----------RAV1(2)    ------>ZmHOX2a(1)<---------AHL20(2) ------ARR14(2) <---------AtMYB61 <---------AtLEC2            ----------->RAV1(2)--------->AHL20(2)<- ------GLK1(2) <------NtERF2  <----------DOF2 xxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)<---------ICU4<-   attgtgtgattgtcggcggaggtattagtggtctttgcatcgctcaggcgcttgctactaagcatcctgatgctgctccgaatttaattgtgaccgaggc  730200              <------NtERF2             --------->ANAC58             --------->ANAC58      <-----------RAV1(1)    ------>ZmHOX2a(2)                                                                  ------>ZmHOX2a(1)  <---------ARR14(2)           --------->REM1(2)                          <-----------GT1  --------->ARR11(3)    --------->ZAT6                    --------->HSFB2a(1)  ----------->RAV1(2)  --------->ARR14(2)   <---------YAB1                     <---------HSFB2a(1) <-----------HVH21 <------ZmHOX2a(1)   <---------ICU4                       --------->HSFC1(2) ------->GAMYB  --------- --------TOE2(3)   --------->TOE2(3)                      <---------HSFC1(2)--------->MYB46(3) --------TOE1(3)----------->RAV1(1)             <---------LBD16   <---------ATHB12   ------>ZmHOX2a(2)   taaggatcgtgttggaggcaacattatcactcgtgaagagaatggttttctctgggaagaaggtcccaatagttttcaaccgtctgatcctatgctcact  730300                                                                                                    <                                                                                     <---------------AGL15                             <---------MYB52(1)                                      --------------->AGL15        <---------ARR11(3)  --------->TOE2(3)                               <-----------GT1<---------TOE2(3)    <--------P     --------->GLK1(2)                                       <-----------GT1 <---------TOE1(3)  <---------MYB46(3)  <---------YAB1                                    <---------ARR14(2) <---------YAB1 >ZAT18 --------->ARR11(3) ----------->GT1      ------->TEIL   --------->ATHB12     <----------------   atggtggtaagttcttgaaacaatctgattcgttaatactgagaacaatgtatttgtgaattgtttgatttgtggatttagccttctctgtttatggtta  730400  Previous    Next  AGI:  At4g01690.1    Description:  PPOX (PROTOPORPHYRINOGEN OXIDASE); protoporphyrinogen oxidase. Identical to Protoporphyrinogen oxidase, chloroplast precursor (PPOX) [Arabidopsis Thaliana] (GB:P55826;GB:Q94F25;GB:Q9ZSI5); similar to HEMG2/MEE61 (maternal effect embryo arrest 61), oxidoreductase/ protoporphyrinogen oxidase [Arabidopsis thaliana] (TAIR:AT5G14220.1); similar to protoporphyrinogen oxidase PX-1 [Nicotiana tabacum] (GB:AAD02290.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN69262.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40220.1); contains InterPro domain Protoporphyrinogen oxidase; (InterPro:IPR004572); contains InterPro domain Range:  from: 729887    to: 732433    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version