Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                            --------->YAB1                                               --------->AHL20(2)                                               --------->AHL20(1)                                               <---------AHL20(2)                                              --------->AHL20(2) ------GLK1(2)                   --------->GLK1(2)<---------AHL20(2)   <----------DOF2 ----->ARR11(3)                  --------->ARR14(2)       --------->TOE2(3) ------ARR11(3)                  <---------ARR14(2) <-----------GT1    <---------DAG2 ----->ARR10            ------>ZmHOX2a(1)     <---------AHL20(2)   --------->REM1(1)   attttcttcatcttgagaaaatgctcctctcttcaaatctggtcttaaataatttatccatcttaatctacaactttttccacatctctgtaaacctata  717200                                             ------>MYB83                                             ------>MYB46(1)                                           <---------MYB59                                        <-----------GT1                          <---------ZAT2                                    <--------HAHB4                               --------->ZAT2      --------->AHL20(2)            --------->YAB1                           ------->TEIL      <---------AHL20(2)           <---------AHL20(2)                    --------------->AtSPL3    --------->CCA1(2)              <---------YAB1            ----------->GT1 --------->MYB52(1)   <---------ARR11(3)         --------->GLK1(2)          ------->TEIL    --------------->AtSPL8   ---   --------->ARR11(3)        <---------GLK1(2)   ---------->DOF2    --------->AHL20(2)            ---   caaaagatttaaacaaaattttcaaattcaagaatctataattaaccaaacaaaagatgaatttggataaataaaaacgtaccagcttgtttagggacag  717300            <---------WRKY18(1)         --------->YAB1         <---------ICU4        <---------ATHB12        --------->MYB46(3)             --------->HSFB2a(1)       -------->P                      <---------HSFC1(2)     <---------MYB111(2)               --------->HSFC1(2)     --------->MYB46(3)       --------->MYB52(1)    <---------At4g35610    <---------bZIP60(1)                        ------>ZmHOX2a(1)   --------->ANAC58        --------->bZIP60(1)                        <----------DOF2   --------->ANAC58        --------->TGA2(1)             <------ZmHOX2a(1)                <----------   --------->ANAC46        <---------TGA2(1)            <---------At4g35610------>ZmHOX2a(1) ------>GLK1(1)<---------------AGL15   <---------HSFB2a(1)     ---------->DOF2  --------->GLK1(2)   - ------>At4g35610          <---------REM1(1)          <-----------RAV1(2) --------->TOE2(3)      <---   agctccagcaaccatgaccatacttagtgatgtaacgaagaagcttctcatcttcttcaggagaccaaagtcctttcctcagtttctgtttgtaacaaca  717400                              --------->AHL20(2)                      <---------ANAC58                              <---------AHL20(2)                      <---------ANAC58  <-----------ARR10           --------->AHL20(1)                      <---------ANAC46  --------->ARR11(3)     --------->AHL20(2)                         <XXXXXXXXXXXXXXXXXXXXMIR835-3P  <---------ARR11(3)   ----------->GT1                   <------ZmHOX2a(2) -GT1              <---------AHL20(2)        --------->GLK1(2)------>ZmHOX2a(2)          --------->DAG2 ------>TEIL     <---------AHL20(2)     ---------->DOF2 <---------ARR11(3)              ---------->DOF2 ------YAB1      --------->AHL20(2) <----------ID1      --------->ARR11(3)     <<<<<<<<<TBF1       <-   tgaatgtcttcccatctatatatatatgtaaataaaatactacaaagaatcaattcaagatcgatcgtttttgtgtgtttcttcttcagaaaaagtttat  717500                --------->ARR11(3)                <---------ARR11(3)               <---------GLK1(1)               --------->GLK1(1)       <-----------HVH21      <----------DOF2                                                                        <-------    <---------At4g35610                                                                      --------    --------->ZAT2                                                                          <------ZmHOX2a(1)    --------->At4g35610                            --------->CCA1(2)                     <------ZmHOX2a(1)    <---------ZAT2                            ---------->DOF2                   ---------->DOF2  <--- --------bZIP60(1) <----------DOF2    --------->ALFIN1                         *TSS    --------->ALFIN1   gaagtcagctttcagagaaatctttagttcataatatgaggtgagagagaaagatagagagagtttgaagtgagaagatgagaaaaggagaggaggattt  717600                                                                         <------MYB83                                                                         <------MYB46(1)                                                                        --------->MYB111(1)                                                                        --------->MYB59                                                                        --------->MYB111(2)                                                                        --------->MYB46(2)  ---------                                        --------->ZAT14                 <---------MYB46(3)  <--------                              --------->SPL7                          <---------MYB52(1)  <---------ANAC55(2)                              <-------TEIL                          <---------YAB1        ----------- --ARR14(2)                 <---------MYB52(1)                 <------MYB46(1)            --------->ANAC55(2) ->ARR14(2)---------->DOF2  <---------SPL7 --------->ZAT6      <------MYB83      ----------->GT1 ------LBD16              --------------->AtSPL3              --------->MYB59  <------------CBF------   ggggaatataaacaaaagggtttttgtttcggtacgttgaagtttactctagtcaaaaacaaatttggttctgtttggtagtattgtagaataagtaatt  717700                                 --------->ZAT6        ----------->GT1          <-----------GT1       --------->DAG2          --------->YAB1                                <---------AHL20(1) >AHL20(2)                --------->AHL20(2)                       <---------YAB1 <---------AHL20(2) -AHL20(2)           <---------AHL20(2) --------->AHL20(2)         <---------AHL20(2) >GT1 ---------->DOF2--------->AHL20(2) <---------AHL20(2)    <---------YAB1 --------->AHL20(2)   --- --->ICU4       <-------TEIL --------->AHL20(2)        ----------->GT1       <---------AHL20(2)  <---   agtgtatgaaaagtgaaatacatttatataaaataatactatataattcaactaaaacagaaatatgatataattgtattttattttatagcaaaatttg  717800                ----------->GT1               <---------TOE2(3)           --------->YAB1        --------->TOE2(3)<---------AHL20(2)        --------->YAB1  <---------AHL20(2)                    <---------HSFB2a(2)       <---------YAB1   --------->AHL20(1)                    --------->HSFB2a(2)----------->RAV1(1)     <-----------GT1    --------->AHL20(2) --------->ATHB12  <-----------------AGL3 -------->GT1--------->ICU4       --------->ARR11(3) <---------AHL20(2)  --------->YAB1          ---- ------TOE2(3)<---------ICU4   <---------ANAC46      --------->AHL20(2)------->TEIL    <---------AHL20(2)   atgtaaattacgataataatgtaaaatttaatggctgatattgagttattgcgatttaaattttctataaatgaatattaatcccacatatatttgatat  717900                       <----------DOF2                               ---------->DOF2            <----               --------->ANAC46                                  <----------DOF2       ----------->HVH21         --------->CCA1(2)                       ---------->DOF2 --------->TOE2(3) <------ZmHOX2a(1)      ----------->GT1  <---------DAG2     ------------------------>ANAC81      ---------->DOF2  -----  --------->ICU4    <---------ALFIN1  --------->YAB1    ----------->GT1      --------->YAB1     <---- ------->GT1 ---------->DOF2         <---------YAB1     <---------ZAT6      <---------YAB1   <-------   agtaagtatggatataaaagtcacacttttcagtaacttatgaaaacgaataaaagtagagataatactttaaaagctatgaaaaggatgtgactgtgtg  718000                                                                         --------->ANAC58                                                                         --------->ANAC58                                   --------->At4g35610                   --------->ANAC46                              <---------ICU4                             --------->ANAC55(1)                              --------->ATHB12                         <---------ALFIN1                              -------->ATHB1                        --------->MYB46(3)                             --------->ICU4                        --------->SPL7                             <---------YAB1                     <---------ANAC58       <---------AHL20(2)    <---------AHL20(2)           --------->ATHB12       <----------DOF2 ---- -----ZAT18                  --------->AHL20(1)          ----------->ARR10       ------>ZmHOX2a(1) ---->ZAT18           ----------->GT1               <---------TOE1(3)<---------ALFIN1            ---- -----ZAT14  <---------AtMYB61--------->ATHB51<<<<<<<<<TBF1     <---------ANAC58 ==================== --ANAC46 <----------DOF2    --------->AHL20(2)     <---------TOE2(3)--------->AtMYB61           <---   aacttatattttcttttggtgttgaagtaaaattattagcttagtttcttcttcaaggtttgatttgcgaaccacacgctatccttttgtttgggataaa  718100  Previous    Next  AGI:  At4g01680.1    Description:  MYB55 (myb domain protein 55); DNA binding / transcription factor. similar to ATMYB61/MYB61 (MYB DOMAIN PROTEIN 61), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G09540.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN75641.1); contains InterPro domain Myb transcription factor (InterPro:IPR015495); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778) Range:  from: 716004    to: 717579    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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