Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                  <---------ETT(2)                <---------ZAT18                     <---------WOX13(1)                              <          --------->MYB52(1)                     <---------YAB1                              <-------       -------->P        --------->LBD16       <---------At4g35610                           <------- ---->LBD16    --------->ALFIN1                ------>ZmHOX2a(1)                      <---------ANAC58 ---LBD16------->GAMYB <---------LBD16   ------>ZmHOX2a(1)      <----------DOF2       <---------ANAC58 -ALFIN1--------->MYB46(3)            ------>ZmHOX2a(1)<---------YAB1                 <---------ANAC46   catactatcaacccacggtggacactccggtttcaatctcctccttctcctctgattgttattcgtcttttgtacttcgttctcgctagcgtaagcttta  712200                                                       ------>NtERF2                                                      --------->DEAR3(1)                                                      --------->RAP2.3(3)                                                      --------->RAP2.3(2)                                                     --------->ORA47(2)       --------->LBD16                                           <---------ALFIN1                  <---------LBD16                                           --------->DREB2C(2)              --------->ATERF1(1)                                           --------->DEAR3(1)               <------NtERF2                                           ------->GAMYB                    <---------LBD16                                          --------->MYB46(3)               ------>NtERF2                                          --------->ORA47(2)              <---------DEAR3(1)                                         <---------ATERF1(1)             --------->ATERF1(1)                                        <---------ALFIN1--------->ATERF1(1)<---------RAP2.3(1)                                        --------->AtMYB61                <------NtERF2                                       --------->MYB46(3)       <---------LBD16<------NtERF2                                   ------>ZmHOX2a(1) --------->RAP2.3(1)<---------ATERF1(1)                                ------>ZmHOX2a(1)   <---------ATERF1(1) <-----------HVH21    --------->ARR14(2)      <---------ARR14(2)      --------->LBD16    <-----------RAV1(1)    <---------ARR14(2)      --------->ARR14(2)      ------>NtERF2      --------->ALFIN1   <------NtERF2            <---------ARR11(3)     --------->DEAR3(1)  <---------REM1(1)  --------->LBD16           --------->ARR11(3)<---------ALFIN1  <---------HSFB2a(2)              <--- --------->LBD16  <---------At5g28300 ------>ZmHOX2a(1)<---------ATERF1(1)--------->ETT(2)      <---- ---------LBD16 ----------->HVH21 <---------ALFIN1 --------->ANAC46 <---------DEAR3(1)    --------->MYB46(3) ---DOF2 --------->LBD16   --------->RVE1(1)--------->ABI4(1)   --------->HSFB2a(2)   <---------WOX13(1) --DAG2<---------LBD16     --------->CCA1(1)------>NtERF2    <-----------HVH21------>NtERF2 ---------   tcgccggaaaccggagaactcaccgctaaatatcctcctcctccaccgcctctccgccgtctccgtctcggaggtgtcgccgggagagattgacaaccgg  712300                                                       --------->LBD16                                                      --------->DEAR3(1)                          <--                                                      <---------ANAC46                            ---                                                    ------>NtERF2                                <---                                                    --------->LBD16                              ----                                                   --------->ANAC46                             <----                                                   --------->DEAR3(1)                          <-----             <---------ARR14(2)                   --------->SPL7  <-------MYC3                <------             --------->GLK1(2)                  <---------ALFIN1  ------->MYC3                -------             --------->ARR14(2)            <-----------GT1       --------->ANAC55(1)         --------    <----------DOF2                     <---------GLK1(1)      <---------ALFIN1    --------->At4g35610 -----P  --------->YAB1                 --------->GLK1(1)<---------ETT(2)       --------->At4g35610 -----MYB52(1)             <---------At4g35610  --------->ANAC46 <---------ANAC55(2)       <---------At5g28300 >MYB52(1)  <---------GLK1(2)   ------>ZmHOX2a(1)<---------ATERF1(1)            <---------At4g35610 <   ttgattctttatcagaatctgaaaaatttagctcctccatggatttctcccctccgccgtggacaacacgtttctcgtcggaagcagaagactcaccgtc  712400         ------>NtERF2         <-----------HVH21        --------->DEAR3(1)     --------->DEAR3(1)                                                                   --------->ARR14(2) ----NtERF2                                                                               <---------ARR14(2) ------>At4g35610                                                                         <---------ARR11(3) ------DEAR3(2)                                                                           --------->ARR11(3) -->NtERF2<------NtERF2                                                        ------>NtERF2 -----DEAR3(1)                                                                --------->ANAC58 ----MYB52(1)                                                <<<<<<<<<TBF1    --------->ANAC58 -----HVH21                                          xxxxxxxxxxxxxxxx>smallRNA(i)         <---------ARR11(1) -------------->WRI1    --------->MYB52(1)       <---------ZAT6               --------->RAP2.6(2) ->DEAR3(1)           --------->MYB46(3)         <-----------RAV1(1)          --------->ANAC46      - ----------DOF2       <---------MYB52(2)---------->DOF2   <<<<<<<<<TBF1  ---------->DOF2 <---------CCA1(2)   ggcttcatcgccgtcgtagttggaacaaacggagagtcttgataaagaatagtgttgttcttcttcttctcttaagaaagacgccattttcatatcttca  712500           --------->YAB1                                             <---------At4g35610        --------->YAB1                                   <---------AHL20(2)                  <-------        ----------->GT1          <-----------RAV1(1)    --------->AHL20(1)     <---------ARR14(2)  --------->ANAC58              <---------TOE2(3)       <---------ARR11(3)     --------->GLK1(2)  --------->ANAC58          >>>>>>>>>GATA-1             <---------AHL20(1)     --------->ARR14(2) --------->DOF2           ----------->GT1 <-----------RAV1(1)   <---------TOE2(3)   <---------MYB52(1)   tcaaaagccatagtaataaactctagtatagataaatgttgtatttgttgtgtctctatatattttgatgttatctgatagtatctgttttttagctttg  712600                                                                                                  ---                                                                                                  <--                      <------MYB46(1)                                        ------>ZmHOX2a(1)   ----                      ----------->GT1                             <-----------TBP                <---                     --------->MYB59                              --------->AHL20(2)             ----                   <---------MYB52(1)         --------->YAB1    <----------DOF2                  <---              <-----------GT1              *TSS              <---------ARR11(3)                <-----  <---------YAB1 <----------DOF2       --------->AHL20(2)    --------->ARR11(3)         <----------DOF2 ---DOF2<---------YAB1<------MYB83 <---------YAB1--------->MYB52(1) <-----------TBP  <---------MYB52(1)   gattttgattttgattttgctgtttggttaaaatgttttgattaaaaaacataacgacatggagacctttatatatatcctatcgccgttctttgaattt  712700                        <---------ARR11(3) ------------>AGL15     --------->GLK1(2)                                   <<<<<<<<<<<<<<<<<LFY -------------AGL15     --------->ARR11(3)                                  --------->YAB1 ------------->AGL3     <---------ARR14(2)                               --------->WOX13(1) --------------AGL3     --------->ARR14(2)        --------->YAB1        <---------AHL20(2) ------------->AGL2  --------->AHL20(2)          <---------ATHB12       --------->AHL20(2) --------------AGL2  <---------AHL20(2)        --------->WOX13(1)      <---------ATHB12 ------GT1     --------->TOE2(3)           --------->WOX13(1)        --------->WOX13(1)         <----   ccatttttagccccaaaacttaataaaatctgccaaatgttaagtctatcaatgaaaaactcgttagaaaccaattaatcacaatggcaagttttccaat  712800                                                                                            ---------                                                                                           <--------ZAP1                                                                                           <---------                                                                                         <------NtERF2                                                                                       <---------DEAR3(1)                                                                                       --------->ETT(1)                                                                                       <---------ANAC46                                                                                      --------->ALFIN1                                                                                     <-----------HVH21                                                                                 <---------LBD16                                                                               --------->ARR14(2)                                                                               <---------ARR14(2)                                                              <------MYB83     --------->KAN4(2)                                                              <------MYB46(1) <----------TaMYB80                                                             xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                             --------->MYB59  <---------GLK1(1)    ---------->DOF2                      ---------->DOF2   <---------MYB52(1)<---------ARR14(2)<----- -----ATHB12         ----------->GT1 ----------->GT1 <----------DOF2         --------->ARR14(2)------   gagcaaaaaagactaagaaatacttgtaaaacgaatgcatagtaaaagcatcgttcttttagttaggtttggacgtttggatattcgggtcggggtcaag  712900                                                                                       <---------MYB52(1)                                                                                      <-------GAMYB                                                                                      --------->TOE2(3)                                                                           --------->AHL20(2)                                                                        <---------AHL20(1)  <--------                                                                        <---------ARR11(3)  <--------                                                                        --------->AHL20(2)  ---------                                                                        --------->AHL20(1)  ---------  <---------RVE1(1)                                                     <---------AHL20(2)  <-------- <---------GLK1(2)                              <---------TOE2(3) ----------->GT1    <---------MYB46(3) --------->ARR14(2)             --------->GLK1(1)      <---------AHL20(2)  <---------AHL20(2) <---------ARR14(2)             <---------GLK1(1)--------->ANAC55(2)    --------->ARR11(3)  --------- >WRKY18(1)          <-----------------AGL1     <---------TOE1(3)--------->HSFB2a(2) --------->MYB52(2) --HVH21          --------->ARR11(3)            --------->MYB59  <---------HSFB2a(2) ----------->GT1- ----O2           <---------ARR11(3)    --------->ARR11(3)      <---------ANAC46    <-------TEIL    < --->O2          <---------CCA1(2)      --------->GLK1(2)      <---------LBD16     <---------MYB52(1)   tcggattttttgaattctaatatctcaaatttggaaatctaaaatctgtttaggtattttaagacttcgggtaatatattaatacgttcgttaatatatt  713000                                                                                                -----                                                                                             <-------                                                                                      <-------MYC2                                                                                      ------->MYC3                                                                                      ------->MYC2                                                                                      <-------PIF5                                                                                      ------->PIF5                                                                                      <-------MYC4                                                                                      ------->MYC4                                                                                      <-------MYC3                                                                                     <---------PIF3(3)                          <---------ARR14(2)                     <---------MYB52(2)  >>>>>>>>>>HY5                          --------->ARR11(3)                --------->ANAC46         --------->O2 -AHL20(1)        --------->ARR11(3)  <---------YAB1        --------->ANAC58         --------->PIF3(3) -AHL20(2)     ------>MYB46(1)      <---------ICU4          --------->ANAC58         --------->ANAC46 >AHL20(1)     ------>MYB83        --------------->AGL15--------->TOE1(3)            ================ >AHL20(2)   <---------MYB59       --------->ICU4    <-----------GT1                 <---------O2---- -ARR11(3)  --------->ANAC46       <---------------AGL15--------->TOE2(3)        <----------------PIF3(2) >ARR11(3)<-----------GT1 <---------ARR11(3)    <---------ARR11(3)        --------->YAB1     -------- -------->At4g35610       --------->ARR14(2)  --------->ANAC58   --------->MYB46(3)  --------->TGA1a ---------At4g35610      <---------CCA1(2)    --------->ANAC58 ----------->RAV1(1)   <---------TGA1a   tctgctaacaatataccgaacatattggtatcttctacttattagtgcaagaaatttaccttaagcaacaatcgaatgacaatttccacgtggcatagcc  713100  Previous    Next  AGI:  At4g01670.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G62070.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40214.1) Range:  from: 711192    to: 712643    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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