Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                            --------->WOX13(1)                                                        <---------ATHB12   --------->ANAC58      --------->MYB46(3)                           --------->ANAC55(2)     --------->ANAC46     --------->ANAC58                             <---------HSFB2a(2)      --------->ANAC58     --------->ANAC58                             --------->HSFB2a(2)    --------->MYB52(1) --------DOF2              <---------LBD16    <---------ANAC58    --------->ANAC58 --ANAC58                <---------ARR11(3)   <---------GLK1(2)   --------->ANAC46 --ANAC58                --------->ARR11(3)   <---------ANAC58    --------->ANAC58   ctttctcaaccaattcgctaacaacaagacctggaatgaaatcagatagcttctcgtaatcagtcaatacgctccaaacggaatcgagactcgcttccat  705500                         <---------ARR11(3)                        <---------ZAT2                    ------>NtERF2             --------->ARR14(2)<---------HSFB2a(2)                                ------>ZmHOX2a(1)             <---------ARR14(2)--------->HSFB2a(2)                            --------->ARR14(2) <---  <---------ATHB12 --------->ANAC46                --------->YAB1    ------>ZmHOX2a(1)   <-----------GT1   tccaatcttcgaacgaattcgacgcgagctcttctcgagcttcttcaactctataagaacaccatcgtctcctactaccaattcctctgttttcccatct  705600                                                                                      --------->At4g35610                                                                                      ----------->GT1                                                                                      <---------At4g35610                                                                                      <------MYB83                                                                                      <------MYB46(1)                                                                                     <---------MYB46(3)                                                                                     --------->MYB55(2)                                                                                    <-----------RAV1(2)                                                                           <------NtERF2                                                                          ------>NtERF2                                                                         <---------ETT(2)                                                                         --------->ETT(2)                   --------->YAB1                                      <-----------HVH21          --------->YAB1                                              <-----------RAV1(1)     -------          <---------ICU4                                              ==========================RAV       --------->YAB1                                           <------NtERF2       <---------MYB55(1)       <---------ICU4                                          --------->LBD16  --------->RAP2.6(3)      --------->ICU4                         ------>ZmHOX2a(1)<---------ANAC46 --------->ARR14(2)   - --------HVH21     <---------ICU4      <-------TEIL          <---------LBD16   <---------ARR14(2)   <   gtcaaacaataatcatcttcatcatcagtttcagtttcagtttcatcctcgttcgaattgaatcgcggagaactgtcgccaaatcggcaggtgaaacatc  705700                                                                                              <------                                                                                             <-------                                                                                             <-------                                                                                          --------->ALFIN1                                 --------->DAG2                                           <---------AtMYB61                            <----------ID1                                            <------NtERF2                 <-----------HVH21                                                   --------->LBD16                 --------->REM1(2)                                                   <------NtERF2       --------->GLK1(2)  ----------->GT1             <---------AHL20(2)        --------->MYB59<----- -->ARR11(3)    --------->ALFIN1---------->DOF2   <---------RVE1(1)      <---------ARR14(2)<---------MYB46(3) -------->HSFB2a(2)    <------ZmHOX2a(1)          <---------CCA1(1) ----------->GT1<---------LBD16--- ---------HSFB2a(2)<---------ANAC46        <-----------RAV1(2) <------NtERF2  <---------MYB52(1) ----   tacgagaagaagctagcagtgtcgaggaaggcgaaaaagaggttatcaggcgatattttttagtcggagagtgtgaattcgttaggccggaagtggtggc  705800                 ----------->GT1                 <---------MYB46(3)             <---------DEAR3(1)             --------->MYB55(2)           ------->PIF5           <-------PIF5           ------->MYC2           <-------MYC3           ------->MYC3           <-------MYC2          <---------ANAC46          <---------ANAC58          <---------ANAC58          <------NtERF2          <---------TGA1a          --------->TGA1a          ======================bZIP_DOF          --------->ALFIN1       <------NtERF2       --------->ATERF1(1)      <---------ATERF1(1)      <---------RAP2.6(1)      <---------DEAR4(2)      <---------RRTF1(1)      <---------ORA47(2)      <---------DEAR3(2)      <---------RAP2.3(1)      <---------ERF1      ------>NtERF2     <---------RAP2.3(3)     --------->ATERF1(2)     <---------RRTF1(2)     <---------RRTF1(3)     --------->ALFIN1                                                            ---------->DOF2     --------->DEAR3(1)                                                       <---------HSFB2a(2)     <---------RAP2.3(2)                                                      --------->HSFB2a(2)     <---------ATERF1(2)                                                     ------>ZmHOX2a(2)     <---------DEAR3(1)                                                     --------->CCA1(2)    <---------ABI4(1)                                                       <------ZmHOX2a(2)    ------>NtERF2<------MYB83                                              <---------ARR14(2)    --------->RAP2.3(1)                                                    <---------ARR11(3)    <------NtERF2<------MYB46(1)                                           --------->ARR14(2)    --------->ATERF1(1)                                                    --------->ARR11(3)   <---------ATERF1(1)                                                     <---------AGP1   <---------DEAR4(2)                                                      --------->AGP1   <---------RAP2.3(1)                                                  --------------->AGL15  <---------DEAR3(1) ---------->DOF2                                    <---------HSFB2a(2) <---------LBD16<---------DEAR3(1)                                      --------->HSFB2a(2) ---MYB46(3) <---------MYB46(3)                                         <---------------AGL15 --ANAC46------>NtERF2 --------->DAG2                                   --------->HSFC1(1)  --------- --RAP2.6(2)--------->ALFIN1<------NtERF2       ------>ZmHOX2a(2)      <-----------------AGL2 -NtERF2<---------ANAC46 <---------LBD16       <------ZmHOX2a(2)       ----------------->AGL2 ------>MYB52(1)<---------AtMYB61             <---------ARR14(2)       <-----------------AGL1       < ------->HVH21  --------->ALFIN1              --------->ARR14(2)       <-----------------AGL3       <   taacgcggcggcgcgtgggtggtgaaaggcggaagagaagtctaataagatcggagaagattgcattgtttcttctagatctggaaagcggtctaaaagc  705900                                                                                                <----                                                                                                <----                                                                                 <---------TOE2(3)  <                                                                              <---------ATHB51  -----                                                                              <---------AHL20(2)<----                                                                           --------->AHL20(2)   -----                                                                       <---------AHL20(1)       -----                                                                       --------->AHL20(1)  <---------AHL20(2)     <----------DOF2                                                  --------->AHL20(2)   --------->AHL20(2)    <---------ANAC58                                              --------->AHL20(2)   <---------AHL20(2)    <---------ANAC58                                      --------->PCF2  --------->AHL20(2)   ------ ->DOF2                                      ---------->DOF2     <---------AHL20(2)    --------->AHL20(2) ---------ANAC58                          --------->TOE2(3)      --------->AHL20(2)   --------->AHL20(2) ---------ANAC58   <----------DOF2      <---------AHL20(2)<---------PCF2  <---------AHL20(2)<--------   aggcttgctttgagctataggctttctatttgggccttatattttcttaaagtcaaaatgggcccatttaaaatatataaattatggatttaattaaata  706000       --------->AHL20(2)       <---------AHL20(2)                                                           <------------CBF    <---------ICU4                                                                 --------->ATHB12    --------->ATHB51                                                             ------>ZmHOX2a(1)    <--------HAHB4                                                              --------------->AGL15   --------->ICU4                                                               <---------------AGL15   <---------YAB1                                                              ----------------->AG --------->YAB1                                                                <-----------------AGL1 -----AHL20(2)                                                                 ----------------->AGL1 -----ARR11(3)                                 <----------DOF2       <---------AHL20(1) -------TEIL                                <---------YAB1           --------->AHL20(1) ---->AHL20(2)                           <---------AHL20(2)          <---------ARR11(3) -----AHL20(1)                           <---------YAB1              --------->ARR11(3) ---->AHL20(1)                          --------->AHL20(2)         --------->AHL20(1) ---->ARR11(3)                          --------->YAB1<---------ANAC46  <---------AHL20(2) --->AHL20(2)                           <---------AHL20(1)         <---------AHL20(1)           <---- -AHL20(2)                         ------------>CBF <-----------GT1<---------ARR11(3)           -----   tattcataattaaaaacttttcaaaatgttttctatctacaatattattcttttttacgtcgaaaccaaaatatttttttttcctagattggaaacattt  706100                                                                                 --------->AHL20(2)                                         <---------RVE1(1)                   <---------RVE1(1)                                         <---------CCA1(1)                   <---------CCA1(1)                            <---------CCA1(1)                               --------->ARR11(3)                            <---------RVE1(1)                               <---------ARR11(3)                      <---------AHL20(2)--------->ARR11(3)                <---------TOE2(3)            <---------At4g35610         <---------ARR11(3)              ---------->DOF2            --------->ZAT14--------->ARR11(3)  <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)<---------AHL20(2)            <---------ZAT14<---------ARR11(3)<---------AHL20(2)     <---------TOE1(3)            <--- -----AHL20(2)      <-----------TBP   <---------TOE2(3)             <---------TOE2(3)<-----------GT1 ---->AHL20(2)<---------ANAC46      ---------->DOF2                ---------->DOF2<---------YAB1 ----   aaaagttttgtttgtgctgtgtatttatagatattttttaaaggtatttttttttttttttttttttgttaaagtaaaggtatttttatacattttcggt  706200                                              <---------AHL20(2)                                              <---------YAB1          --------->AHL20(2)           --------->AHL20(1)              --------->AHL20(1)         <---------AHL20(2)           <---------AHL20(1)           --------->AHL20(2)           --------->AHL20(2)           --------->AHL20(2)         <---------DAG2             <---------AHL20(2)           <---------AHL20(2)      <-----------GT1          --------->ICU4 --------->AHL20(2)          --------->AHL20(2)       ------->TEIL--------->YAB1    --------->AHL20(2)   <----------DOF2 ------ETT(2)              <---------LBD16 <---------AHL20(1) --------->TOE2(3)       <---------DAG2 ----->ETT(2)          <----------DOF2<----------DOF2    <---------YAB1   --------->AHL20(2)   ctacaatttagaataaatttctcttctttttcggatgtaactttatatattataagtttataattcttaaattaaaataaaaaaaaaacttttttaaaag  706300                                                --------->ATHB12                                                <---------AHL20(2)                                               --------->AHL20(2)                                               --------->ICU4                                               <---------AHL20(2)                                          <---------ANAC55(2)                                          <---------ANAC46                    --------->LBD16       <---------ANAC55(1)          --------->YAB1                  --------->ANAC55(2)         ----------->GT1                  <---------ANAC58                                   <-------         <---------YAB1                   >>>>>>>>>>HY5                                      <-------      <---------AHL20(2)                  <---------ANAC58                                  ---------     <---------AHL20(2)          --------->AHL20(2)                             <---------AHL20(2)     --------->AHL20(1)          <---------AHL20(2)   ------->TEIL             --------->AHL20(2) <--     <---------AHL20(1)         --------->AHL20(2)<---------WOX13(1)    ----------->GT1     <--------     --------->AHL20(2)---------->DOF2   ----------->STF1               <---------ANAC55(2) ---------    --------->YAB1 --------->ANAC46     <---------TGA2(2)         --------->AHL20(2)      --------->ICU4   tttttaatataatgaaaatacccccaaaagaaaattaaaatatgacgtattaattgaatcttccactataaattatgtaaatttaaaatgccaatattat  706400  Previous    Next  AGI:  At4g01650.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G08720.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40206.1); contains InterPro domain Streptomyces cyclase/dehydrase (InterPro:IPR005031) Range:  from: 704578    to: 705866    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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