Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                          --------->LBD16                                                                                       <---------HSFB2a(2)                                                                                       --------->HSFB2a(2)                        <---------ICU4                                          --------->ANAC46                        --------->YAB1                                          --------->ANAC55(2)                        <--------HAHB4                                          <---------ANAC55(2)                   <----------DOF2                                             --------------->AtSPL8      --------->ANAC55(2)                       --------->AHL20(2)             <-------TEIL      <---------ANAC55(2)              <---------At4g35610                --------->AHL20(2)   --------->WRKY18(1) <---------YAB1 <-----------HVH21                  <---------AHL20(1) ----ICU4          <---------DAG2----------->RAV1(2)                     <---------ARR11(3)     <---- ->TOE2(3)  <-----------GT1     ------->TEIL    <---------AHL20(2)       --------->AHL20(1)   <------   tttcagtcaagtattttctagctttatcattacgaacctgcatcagagaaataaatgtttagctatacagttcaatatatatacgtactccagaaattaa  691600                                                                                                 ----                                                                                                 ----                                                                                                 ----                                                                                                 <---                                                                                                -----                         --------->LBD16                                                        <----                        <---------HSFB2a(2)                                                     <----                        --------->HSFB2a(2)                <------ZmHOX2a(2)              <----------DOF2          --------->MYB52(1)       <---------At4g35610    --------->ARR11(3)              <---------DAG2       --------->YAB1--------->ANAC46         <---------ANAC58                         <---------ALFIN1 -----TOE2(3)    --------->YAB1    --------->At4g35610    <---------ARR11(3)    <---------WOX13(1)--- ---AHL20(2)    <------ZmHOX2a(2) ------->TEIL<---------ANAC58             <---------At4g35610 <-----   tgtgaagaataaaaacggatcatactccagaaattgcatctgattttggtgtgccaagaagatcagtaatcaactccaactgatggacaacactttttcc  691700                                                                          <---------ZAT14         <---------ANAC58                                            <---------ZAT18         <---------ANAC58                                            --------->ZAT18 ----->HSFB2a(2)                                                     --------->ZAT14 ----->LBD16                                                         <---------ZAT14 ----->ANAC46                                                     <---------ANAC58 ------HSFB2a(2)                                                  <---------ANAC46     <-----------GT1 ---->HSFB2a(2)                        ------>NtERF2              <---------ANAC58  --------->YAB1 -----HSFB2a(2)                        <---------At4g35610   <---------At4g35610  --------->AHL20(1) -----LBD16                         <-------TEIL             --------->At4g35610 --------->YAB1 ------>LBD16                 ---------->DOF2                <---------ZAT2      --------->AHL20(2) ----LBD16        <---------------AtSPL3                --------->ETT(2)  --------->ZAT14          --   cggaaacaatggcttccatgttagtacctctgcaaagatgcagccaatgctccaaacgtcgatagctggagtgtactgcagaataatattaactatcaac  691800                                                  ------>MYB83                        ---------->DOF2           ------>MYB46(1)                     ----------->RAV1(1)          --------->ANAC58                    <----------ID1                --------->ANAC58                                ---                --------->ANAC58                  --------->ANAC46                           --------           <----------ID1                    --------->REM1(1)          <---------MYB46(3)  <--------          <------ZmHOX2a(1)              --------->At4g35610       <-------TEIL           --------->YAB1 --------->GT1  --------->ANAC58         <---------At4g35610  --------->AHL20(2)          <---------ICU4   gatgtaacataaggagacaagaacaacaaagaaaactgtatggagcttcaccaagccaagttgattatatacatctgttgaaaccgagttgatcatggta  691900                    <-----------GT1                                                                 >    <---------At4g35610<---------DAG2                                                              --    --------->At4g35610<----------DOF2                                                         <----- <-------TEIL     <---------ANAC58                                                         --------->LBD16 ------>ICU4      <---------ANAC58                                                    <---------ALFIN1 --->GT1     ------>ZmHOX2a(1)                                                <-----------GT1*TSS  -- -YAB1     ----------->RAV1(2)                                             <---------YAB1<---------LBD16   atattcatctccctcctgtttcttactttttgatattgaactcattcgaaaactcttctaattttctgatattgttgattatacagcctcacccggatgt  692000                      --------->YAB1                      <--------ATHB1                      <---------ICU4                      --------->ATHB12                     <---------ATHB12           ------->MYC3       --------->ARR11(3)         --------->ANAC58           ------->MYC2    <---------TOE2(3)             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)           <-------MYC3   ---------->DOF2                --------->ANAC58           <-------MYC2 <---------YAB1                   --------->ANAC46          --------->At4g35610 <---------ARR11(3) <---------At4g35610                         <------- ------------>CBF    <---------YAB1             <---------TOE2(3)                        ---------->ID1 >>>>>>>>>>>>>>>>LFY --------->ICU4             <---------TOE1(3)<---------MYB52(1)      <-----------GT1 ------->ANAC58  ------------>CBF            <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)         <-----------GT1 ------HVH21    --------->ANAC58            <----------DOF2 ----------->RAV1(1)<---------ARR14(2) ------->ANAC58 --------->ANAC58           --------->TOE2(3)------------>AtMYB77 <-------TEIL<-------   caagccaatggcatatgcaaacaatgattaaagatgttctctcttcctttaagcttatccagcaacagttattctcatgtagattcagtttttccctttt  692100                              <------ZmHOX2a(1)                            <---------TOE2(3)                                                      <-                   xxxxxxxxxxxxxxxx>smallRNA(s)                                                    --   <---------AHL20(2)       <---------TOE1(3)     <---------AHL20(2)                               <-  <---------AHL20(1)   ------>MYB46(1)           --------->YAB1         <---------ARR11(3)         --  --------->AHL20(2)   ------>MYB83              <---------AHL20(2)     --------->GLK1(2)     -------  <---------AHL20(2) xxxxxxxxxxxxxxxx>smallRNA(s)--------->AHL20(2)     --------->ARR11(3)   -------- --DAG2       <---------HSFB2a(2)                <---------AHL20(1)    --------->CCA1(1)     ======== ---DOF2      --------->HSFB2a(2)         ----------->GT1              --------->RVE1(1)     --------   tcaatttttttttgttttagaaacccacttaaggattccatcaatggtcaataaaattttcaaaaactctaaaaaatctctaaactactaaactatccaa  692200       --------->YAB1       --------->AHL20(2)                       <---------GLK1(1)    --------->YAB1                             <---------ARR14(2)  <---------YAB1                         <---------ICU4 --------AHL20(1)                        --------->ATHB12 ------->AHL20(2)                        -------->ATHB1 --------AHL20(2)                        --------->YAB1                 <---------AHL20(2) ------->AHL20(1)                       <---------ATHB12  <---------ANAC58 -------->AGL15         <---------------AGL15  --------->ARR14(2)--------->GLK1(2) --------->AGL3         <----------DOF2 --------->ICU4    <---------ANAC55(2) =======================================MADS_MADS         <---------ANAC58                <---------GLK1(2) --------->AG <-------TEIL              <---------YAB1    --------->ANAC55(2)<-----------GT1    <----   atttattaataaaaaatacatagaaactttacttagaaactaatcattggatttgctattacttactaatctgtttattttacttaaaaacagattattt  692300                                                    <----------DOF2  <---------YAB1                       <---------MYB52(1)          <---------ANAC46  <---------TOE1(3)        <------                  <---------ARR14(2)             ------->GAMYB       <---------TOE2(3)      ---------                  ------->TEIL               --------->MYB46(3)  <----------DOF2            <--------                  --------->ARR14(2)<---------HSFB2a(2)          <-------GAMYB             --------->ICU4           <---------ANAC58         --------->HSFC1(1)   <-----------RAV1(1)            <------ZmHOX2a(1)           <---------ANAC58 <-----------GT1<-----------GT1    <---------ANAC46--------->AHL20(2)   --          --------->At4g35610       ------>ZmHOX2a(1) <XXXXXXXXXXXXXXXXXXXXMIR2939    --------->MYB59 -----AHL20(2)    --------->GLK1(2) --------->HSFB2a(2) <---------TOE2(3)     <---------AHL20(2) ----   tatcttcaaattagcttacgaatctgtttttttctctcctagaattaacaactgcgtttatgttgtgcgttatggttttataaattgttaggaattatga  692400                                                                                  --------->GLK1(2)                                                                                  <---------ARR14(2)                                                                                  --------->ARR14(2)                                                                               ------->GAMYB                                                                             ------>MYB46(1)                                                                             ------>MYB83                                                                  <---------HSFB2a(2)                                                         <-----------GT1     -------->P<---------ARR14(2)                                                     <---------AHL20(2)     ------>MYB83<------ZmHOX2a(2)       <---------AHL20(2)                            --------->AHL20(2)     ------>MYB46(1) ---YAB1   <---------ICU4                            --------->AHL20(1)     --------->MYB52(1)     -- >YAB1--------->AHL20(2)                             <---------AHL20(1)   --------->MYB46(3)       -- -ICU4<---------AHL20(2)                         <---------AHL20(2)       <---------MYB59          -- --------->GT1              <---------YAB1   ----------->GT1      --------->HSFB2a(2)  --------->ARR14(2) ----->At4g35610   <-----------GT1       --------->ICU4 <---------YAB1   --------->ANAC46    --------   gttgaaaatttaatctttgtttaacctcttatgagtagtagtagtaatggtttaatttattactactactcgaagacccaaccgaatccgatccaaaaaa  692500  Previous    Next  AGI:  At4g01593.1    Description:  other RNA Range:  from: 690710    to: 692169    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g01595.1    Description:  MAP kinase. similar to ATMPK18 (ARABIDOPSIS THALIANA MAP KINASE 18), MAP kinase [Arabidopsis thaliana] (TAIR:AT1G53510.1); similar to double HA-tagged mitogen activated protein kinase 18 [synthetic construct] (GB:ABG54345.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009) Range:  from: 690726    to: 691993    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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