Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         --------->LBD16                                       ------>NtERF2                           ------>ZmHOX2a(2)                                   <-----------GT1                            <------ZmHOX2a(2)                --------->ATHB12--------->ICU4                               --------->ARR11(3)               <---------YAB1   <---------YAB1                               --------->ARR14(3)               --------->ICU4<---------MYB52(1)                              <-----------ARR10          <---------MYB46(3)<-----------HVH21      --------->At4g35610       <---------ARR14(3)         <---------AtMYB61  <-----------TGA1       <---------At4g35610       --------->ARR14(2)         <---------ANAC46  --------->ANAC46   <---------At4g35610            <---------ARR14(2)         --------->ALFIN1------>ZmHOX2a(1)  --------->REM1(1)         <----------DOF2    <---------ANAC46 <-----------GT1 <---------LBD16              ---------->ID1          <---------YAB1  ------>ZmHOX2a(1) <-----------GT1--------->ARR14(2)         <----------DOF2<---------ARR11(3)   tctccttcgtggtggtgatgatttatcctccgtcatgtttccgccttcatctccgcttccttctctttttctctttcacgatcttctcaatttttattct  668900                               <------MYB46(1)                               <------MYB83                    <---------ICU4                   <------ZmHOX2a(2)                  --------->ARR11(3)               <---------HSFB2a(2)                                <---------------------WRI1               --------->HSFB2a(2)     XXXXXXXXXXXXXXXXXXXX>MIR164C           <----------DOF2    --------->MYB59            <-----------RAV1(1)              --------->TOE2(3)      <----------DOF2       <---------MYB52(1)          <---------TOE2(3)           --------->ALFIN1  <----------DOF2 <---------ARR11(3)   XXXXXXXXXXXXXXXXXXXX>MIR164A/B        ---------->DOF2      <--   tctcctttcttttctttccagatcatggcagtttggttatagagaaacaaaacacattgatgttggaagaagacatgaacaaagaggtggaacatcaata  669000                                                                        <---------YAB1                                                                        --------->ICU4                                                                     --------->ICU4                                                          --------->ANAC46                                                          <---------ANAC55(2)   <------NtERF2                                                          --------->ANAC55(2)   <---------At4g35610                                                          --------->TGA1a       --------->At4g35610                                                          <---------TGA1a*TSS  <---------MYB46(3)                                                          --------->O2<---------ICU4                                                          --------->ANAC58    <---------RAP2.6(2)                    --------->LBD16      ---------->DOF2  <---------O2--------->YAB1                   <---------ANAC46      ===========================bZIP_DOF<---------MYB46(3)                  <---------LBD16  --------->TOE2(3)      --------->ANAC58 <---------AtMYB61            --------->YAB1  <----------ID1        --------->ANAC58   <---------ATHB12          <----- -------GLK1(2)---------->DOF2     --------->YAB1 --------->ANAC58 --------->YAB1 ----------->HVH21--   ggttctctcgacgttgataatgcggagattacgacaacgataacaaaggctcacgaactcacgtctcaacaatgatgatggtggctgacttagtttagga  669100            --------->AHL20(1)                                                       ----------->GT1            <---------ARR11(3)                      --------->DAG2              --------->YAB1       ------------>CBF                            ---------->DOF2             <---------YAB1 -ZmHOX2a(1)<---------AHL20(1)          <---------ANAC58            --------->YAB1 <---------ICU4 ------->AHL20(2)----------->HVH21      <---------ANAC58 <------------CBF--------->At4g35610   cttaaataccccaatatatatgacacttacaaaacccttgttgtttgtcatcaaaaagagattgggccatttatgagctatatcataatgtcaaaacaaa  669200                                                          --------->CCA1(2)                                                         --------->ARR11(3)                                                 <-------GAMYB                                                <---------MYB46(3)                          ------------>CBF      --------->MYB111(2)                       <-------GAMYB            --------->MYB55(2)                      ----------->GT1       <---------MYB46(3)                      --------->ALFIN1      --------->MYB55(2)                    <---------ANAC58     <------MYB46(1) <---------ARR14(2)                    <---------ANAC58  <---------ANAC58   --------->ARR11(1)                        <-                    <---------ANAC46  <---------ANAC58   <---------ARR11(3)                       <--                  --------->ZAT18     <---------ANAC46   --------->ARR14(2)                     -----                 --------->ALFIN1<-----------GT1--------->MYB52(2)<------------CBF            -------           --------->ALFIN1<---------YAB1<------MYB83  ----------->ARR10             <----------DOF2         <-----------RAV1(1)   --------->YAB1 <---------ANAC46   <------ZmHOX2a(1)   ----------------   ttggcccaactatgtgggagtggggtgttacaattatactgcttggtggtttgttggaagatatggaggattgagcttgaatttctcctttgtgagaatc  669300                                              <---------AGP1                                              --------->ARR14(2)                                              ------->TEIL                <---------ZAT2                <---------ARR11(3)     <---------------AGL15                    --------->ARR11(3)     --------------->AGL15       <---------YAB1    <-----------------AGL3     --------->CCA1(2)    <-----------------AGL2    --------->ARR11(3)                     <---------YAB1 --------ICU4   --------->ZAT2<---------ARR11(3) <----------DOF2    <---------ANAC58 -------YAB1    <---------At4g35610   --------->At5g28300           <---------ANAC46 ---->YAB1      <------NtERF2 --------->ARR11(1)------>ZmHOX2a(2)   <---------ANAC58 -->GLK1(2)     --------->At4g35610  ----------->GT1        ------->TEIL ----->WRI1--------->MYB59---------->DOF2     <---------ARR14(2)  <---------YAB1   ataatagctatattaggcagcagggattcaaagatatgatggtaaatggatcttttgggatgaaactgatgcttatagagagcctgaacttacttaagaa  669400                                                       --------->ARR14(2)                     <------NtERF2                                                       <---------ARR14(2)         <---------ARR11(3)                                                      <-------GAMYB     ---------->DOF2     ---------                                                     <---------MYB46(3) =============================                                                    <---------TOE2(3)<---------ZAT6 --------->MYB52(1)                 --------->MYB52(1)        --------->ANAC58--------->ZAT18  <------ZmHOX2a(1) -------        <---------HSFB2a(2)                --------->ANAC58<---------ZAT18 <----------ID1 --------->ALFIN1   tactactgttcttgaagaccaagggaaatggaattgtgagtttggaagcaagttgtggttatgcactagaagtgtaaaggacaagataacaggggtggca  669500       --------->TGA1a       --------->bZIP60(2)       --------->ANAC58       --------->ANAC55(2)       --------->O2       <---------O2       <---------TGA1a       --------->bZIP60(1)       <---------bZIP60(1)       <---------ANAC55(2)       --------->ANAC58       ==========================bZIP_DOF       ==========================bZIP_DOF   <-----------HVH21  --------->ANAC58  --------->ANAC58    ---------->DOF2                          <---------TOE2(3) >ALFIN1             --------->AHL20(2)                        <---------TOE1(3)           <---------ARR11(3) ================bZIP_DOF              <----------DOF2        <-----------RAV1(2)      <---------ZAT14 ---------------->TaNAC69(2)     ----------->GT1           <----------DOF2             --------->ZAT14   agggaagtcacgtctcttcaccattaaagaacatatggttacttttgttttttgaaacatgctttcaggttatcgtccaaaggtttcagtccagagcttc  669600                                     --------->ALFIN1                                   <---------ANAC58                                              ----                                   <---------ANAC46                                <---------ARR11(3)                                   <---------ANAC58                                --------->ARR11(3)                                --------->ALFIN1                               ------->GAMYB   <-----                          --------->CCA1(2)                        --------->GLK1(1)    --------->ATHB12   agtacaaaacacaatgtgatgcaattagatataagtggggtttggcaactcttgatggtttacattcagatttcgattcaaccgagaacttcattggctt  669700                           --------->MYB52(1)                   --------->ANAC46                ------>ZmHOX2a(2)               <------ZmHOX2a(2)              <---------GLK1(2)              --------->ARR11(3)              --------->ARR14(2)              <---------AGP1                            --------->ATHB12              --------->AGP1                <---------ALFIN1              <---------ARR11(3)            --------->ANAC58                      ---------->DOF2              <---------ARR14(2)            --------->ANAC58                 ------>ZmHOX2a(2)              <---------ARR14(3)         --------->ARR14(2)                  ----------->GT1              <-----------ARR10         <-----------HVH21         <---------MYB46(3)                <              --------->ARR14(3)       --------->LBD16 <---------YAB1--------->ALFIN1           <---- ----->ATHB12<---------CCA1(2)----------->GT1      ----------->RAV1(1)  <---------WOX13(1)  <-------- -----DOF2  ----------->ARR10 <---------MYB46(3) --------->MYB46(3)  ----------->HVH21 <---------ICU4   cattgagctaggcccagatcttcgcaatcgaacggttgaaccggacacacatccaacatcattgagagcgggtgatggatcgtataaagtcattaccaat  669800  Previous    Next  AGI:  At4g01533.1    Description:  other RNA Range:  from: 667148    to: 669073    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g01535.1    Description:  unknown protein Range:  from: 669339    to: 669830    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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