Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  --------->ANAC58                                --------->ANAC58                              <---------ALFIN1                             <------NtERF2                            <-----------HVH21              <---------MYB52(1)                           <---------ANAC58            <---------At4g35610                        ---                           <---------bZIP60(1)         ------>NtERF2                             <---                           --------->bZIP60(1)     --------->ANAC58         <---------ANAC58    -----                           <---------ANAC58        --------->ANAC46  --------->LBD16            -----                      <---------HSFB2a(2)          --------->ANAC58  ------>NtERF2          ---------    <---------HSFB2a(2)--------->LBD16           ---------->DOF2    --------->ANAC46        --------- ----->YAB1           --------->HSFB2a(2)       --------->ARR14(2)  --------->ANAC58      --------->MYB46(3) ->TGA2(2)       <---------ANAC58               <---------ARR14(2)  --------->ANAC58    ----------->RAV1(1) ---TGA1         <---------ANAC58      <---------YAB1 --------->DEAR3(1)    <---------ANAC58---------   cacaatctcgaaaacgactgcgttccagggcgtcactccatatgatagcgaaaacgcagccgtttccatcccgccagtgcttaccttgagcaacaagcaa  625500                                                                                                 ----                                                                                              <------                                                                                             <-------                                                                                          ------>NtERF2                                                                                          --------->LBD16      <---------ZAT14                                                                    <---------ANAC46      <---------At4g35610                                                               <---------LBD16      <---------ZAT2                                                                  --------->ANAC46      --------->At4g35610                                                             --------->DEAR3(1) ------>TOE1(2)                                                                       ------->GAMYB ------ZAT2                                                                          <------------AtMYB77 ---->ANAC58                                                                         --------->DEAR3(2) ---->ANAC58                                                        --------->YAB1   --------->MYB46(3) >ANAC46                 <------ZmHOX2a(2)                         <---------ATHB12<-----------GT1 -- >ANAC58   --------->LBD16     ---------->DOF2         <---------YAB1---------->DOF2<---------At5g28300 >ANAC58  <---------ANAC46    <---------ATHB12      <---------MYB52(1)             --------->ARR14(2)   gctacgactgctccgagtaattgagcgatccaataaagaatagctctcaacaacgttatgtttccaccaataaaagccccaaatgtaaccgccgggttca  625600                                                                                          <---------ANAC58                                                                                     --------->ALFIN1                               --------->RAP2.6(2)                                   <-----------RAV1(1)                               --------->ANAC46                                    --------->At4g35610                            --------->ARR14(2)                                     <------MYB83                            <---------ARR14(2)                                     <---------At4g35610                 --------->At4g35610                                               <------MYB46(1)              <---------MYB52(1)                                                   <---------ZAT2              --------->DOF5.7(2)    ------->GAMYB                                --------->MYB55(2)             --------->TOE1(3) --------->ANAC58  --------->ANAC58                ================RAV     ----------->RAV1(2) ------->GAMYB      ------->GAMYB             ----------->RAV1(1) <---------ANAC58     --------->At4g35610--------->ANAC58   --------->ANAC58           =======================RAV   <---------ALFIN1   --------->MYB52(1)   --------->ANAC46         ------>NtERF2<---------MYB55(1) ----->ANAC55(2) <---------At4g35610<---------MYB52(2)              <------NtERF2<-----------RAV1(2) -TEIL ----------->HVH21--------->ANAC58   --------->ANAC58        <---------ATERF1(1) <---------RAP2.6(2) ----HVH21   --------->TOE2(3) --------->ANAC58  --------->ANAC58  --------->RAP2.6(2) --------->ALFIN1 --------->HVH21--------->MYB52(2)  --------->MYB46(3)     ---------->DOF2      <---------MYB52(1)   catgaccacctgaaacgttagctccaacggaaaccgcaacgaacaacgcaaacgcatgagacaaagacgcggccacaagaccggcaggtgtggctggacc  625700                                                                               <---------ZAT2                                                                               --------->At4g35610                                                                               <---------At4g35610                                        --------->LBD16                     ---------->DOF2                           --------->LBD16                               <---------HSFB2a(2)                  --------->ANAC58    <---------LBD16                    --------->HSFB2a(2)                  --------->ANAC46 <---------WRKY18(1)                   --------->LBD16                  --------->ANAC58----------->HVH21          --------->HSFB2a(2)              <---------HSFB2a(2) --------->WRKY38(1)        <---------HSFB2a(2)  --------->At4g35610              --------->HSFB2a(2) --------->WRKY12       ------->GAMYB   ------>NtERF2       --------->MYB52(2) <---------HSFB2a(2)           --------->MYB46(3)--------->ANAC46     <---------MYB52(1)   --------->HSFB2a(2)         <-----------GT1  <---------LBD16             --   atctccagttagttttccataagccattccagagccttgacccgcgaaaacgaatataaccatcgagaaaaactccgcgaaagctgctctaatcgcatcg  625800                  <---------SPL7                 <---------ANAC58                 <---------ANAC58                                       <---------ANAC58                <------NtERF2                                           <---------ANAC58               --------->LBD16                                      <---------ANAC58               ------>NtERF2                                        <---------ANAC58              --------->ANAC46                                   <----------DOF2              <---------DEAR3(1)               ----------->GT1  <---------ANAC58              --------->LBD16         --------->ATHB12   --------->AHL20(2)       <---------ANAC58            <-------GAMYB         <---------AHL20(2)       <---------ANAC58   --------->YAB1      <------NtERF2     <---------ANAC58 ------->SPL7<---------LBD16   --------->GLK1(2)        --------->AHL20(2)   ------>ZmHOX2a(1)   ggacgactagcttcccccggcgttccaatcgcaattctgttgataggcatcgttacaaaaaaatttgctttcttgcttcctcttcattttgtttttcatc  625900                                                                                       <---------TOE2(2)                                                                                      --------->STY1(1)                                                                                  --------->TCP15(1)                                                                                  --------->TCP16(1)                                                                                  --------->ZAT18                                                                                  <---------PCF2                                   <---------ANAC46                               --------->PCF5                                 --------->ALFIN1                                <---------TCP15(2)                        --------->MYB52(2)                                       ----------->TCP11(1)                ---------->DOF2--------->TGA1a                                  --------->ABI4(2)            ----------->GT1    <---------O2                                     <---------MYB46(3)       <---------AHL20(2)      --------->O2                                <---------At5g28300       --------->AHL20(2)      <---------TGA1a--------->GLK1(2)           <-----------GT1    ----------->GT1   <---------MYB52(1)  --------->YAB1                <----------DOF2<---------TOE1(2) ---------->DOF2=========================bZIP_DOF                    <---------ZAT6   <---------STY1(1) ========================================bZIP_DOF             <---------TOE2(3)--------->ALFIN1   agtaaaagtttaaatagttaaagcgttagtgccaagtgtgtgtatgagaatcgttcaagagactgagattagtgttttacggtgggccctaggttataag  626000                                                          --------->YAB1                                                      <---------AHL20(2)                                                     <---------AHL20(2)                                                 --------->AHL20(2)                                          <-----------GT1 --------->TOE2(3)                    <-----                                        <---------ANAC58--------->ARR11(3)                <----------              <---------YAB1            <---------ANAC58<---------ARR11(3)                -----------            --------->YAB1        <-----------GT1<---------AHL20(2)                --------->AHL20(2)           --------->ICU4     --------->AHL20(2) <---------AHL20(1)                ----------->TBP           <---------YAB1     <---------AHL20(2) --------->AHL20(1)              <---------HSFB2a(2)       --------->At5g28300<---------AHL20(2)    <---------ATHB12                 --------->HSFB2a(2)      ----------->GT1     --------->AHL20(2)------------>CBF                 <----------DOF2<--------    --------->SPL7 <-------TEIL--------->YAB1 --------->WOX13(1)   <---------MYB52(1)    <-----------   --------->MYB52(1)    --------->AHL20(2)-------->P--------->AHL20(2)  ---------->ID1  <---------YAB1   aaatcgaacggtgattataaattcatatttaattaataacttacttaccaattaattaaatcttaatccgtttttctcgctttctataaatactattatg  626100                     --------->ZAT14                     <---------ZAT14                    <----------DOF2                ------->MYC3                                           <---------GLK1(2)                <-------MYC3                                      --------->LBD16    <------------CBF<---------DAG2           <---------DAG2      --------->HSFB2a(2) ------------>CBF *TSS                       <----------DOF2     --------->ANAC46                  <- ----ANAC46     <-------MYC2            <-----------TGA1        <---------LBD16                    -- -----AGL15     ------->MYC2            <-----------HVH21    <----------DOF2                     <--- ---->AGL15    --------->ANAC58     <---------ICU4        <---------ALFIN1                       <--- -YAB1         --------->ANAC46    <---------YAB1       <---------ALFIN1                         <--- ------AGL2    --------->ANAC58  --------->YAB1   <----------DOF2<---------HSFB2a(2)        ---------   ggtagcaattgaagaacacgcgctttactgttttctcatcatcgtcacttttctttctccacactttccgcaagattgttctgttcttcaaacgattcta  626200                                                                                            <--------                                                                                       ------>ZmHOX2a(2)                                                                                      <------ZmHOX2a(2)                                                                                     --------->ARR14(2)                                                                                     <---------ARR14(2)                                                                                     --------->AGP1      <---------DAG2                                                                 <---------AGP1      <----------DOF2                      <---------ANAC58                          <-----------ARR10  --------->ANAC58                         <---------ANAC55(1)                       --------->ARR11(3)  --------->ANAC58           ------>ZmHOX2a(2)                                       <---------ARR11(3) --------->SPL7            <---------ARR11(3)      <---------YAB1               ------->GAMYB <-------TEIL         <-------TEIL         <---------ANAC58  ================================HOX2a_HOX2a --------SPL7        --------->ARR11(3)    --------->ANAC55(2)             --------->MYB46(3) ------->TOE1(2)   --------->HSFC1(2)      <---------ANAC46  ------>ZmHOX2a(1) --------->ANAC58 ------TOE1(3)     --------->HSFB2a(1)     <---------ANAC55(2)<---------LBD16  --------->ANAC58 ------------AtSPL8<---------HSFC1(2) <-----------RAV1(1)    =================================HOX2a_HOX2a ------TOE2(3)    <---------TOE1(3)   <---------MYB46(3)   ------>ZmHOX2a(2) --------->MYB52(1) >GLK1(2)         <---------TOE2(3)<----------DOF2<---------TOE2(3)     <---------CCA1(2)   ---------   aggtacgacttttttttttgaaggttcttgatctcaacttttgttgcgtattgatgtttgatcctctggattttgtatccaacggaagatctatcgagaa  626300                                                                           <---------TOE2(3)   <-----                                            <---------ARR11(3)          <---------WOX13(1)     ------                                            <---------GLK1(2)         --------->ATHB12         ------                              --------->At4g35610            ------>ZmHOX2a(2)                <------ -HSFB2a(2)                   <---------At4g35610          --------->ARR11(3)     --------------->AtSPL3 >HSFB2a(2)             <---------ZAT6      --------->ARR11(3)       <---------YAB1--------->YAB1   atgaacaaattcgatacaaattgttagtgtttagctgaattatgtagattttgttaacttcgatcttgaagatgattgatgtttatcgtactagtagaat  626400  Previous    Next  AGI:  At4g01470.1    Description:  GAMMA-TIP3/TIP1;3 (tonoplast intrinsic protein 1;3); water channel. Identical to Aquaporin TIP1-3 (TIP1-3) [Arabidopsis Thaliana] (GB:O82598;GB:A0MF47;GB:Q1PEC5); similar to GAMMA-TIP (Tonoplast intrinsic protein (TIP) gamma), water channel [Arabidopsis thaliana] (TAIR:AT2G36830.1); similar to unknown [Populus trichocarpa] (GB:ABK94058.1); contains InterPro domain Aquaporin; (InterPro:IPR012269); contains InterPro domain Major intrinsic protein; (InterPro:IPR000425) Range:  from: 625092    to: 625850    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g01480.1    Description:  ATPPA5 (ARABIDOPSIS THALIANA PYROPHOSPHORYLASE 5); inorganic diphosphatase/ pyrophosphatase. similar to ATPPA1 (ARABIDOPSIS THALIANA PYROPHOSPHORYLASE 1), inorganic diphosphatase/ pyrophosphatase [Arabidopsis thaliana] (TAIR:AT1G01050.1); similar to soluble inorganic pyrophosphatase [Populus tremula x Populus tremuloides] (GB:AAD46520.1); contains InterPro domain Inorganic pyrophosphatase; (InterPro:IPR008162) Range:  from: 626118    to: 628055    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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