Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100   <---------AHL20(2) --------->AHL20(2)                                         ----------->GT1 ---------AHL20(2)                                     ----------->GT1 -------->AHL20(2)                              <---------STY1(2) -----YAB1                                 <---------YAB1 ---------->DOF2    --------->YAB1        -- ---DOF2        <---------YAB1   <-----------RAV1(1) ---------->DOF2<---------ICU4         --------->MYB52(1)   gattaaattgtatgtattcttattcgattttgtctatgttgttttttgatagctagaaagtaaagtttattcatttcatttataaactgtagataacaga  596000              --------->ALFIN1        --------->AHL20(2)        <---------AHL20(2)     <--------HAHB4     <---------ICU4     --------->ATHB51     --------->YAB1    --------->ICU4                              --------->YAB1    --------->AHL20(2)   ---------->DOF2       <---------YAB1         <---------AHL20(2)           <-  --------->YAB1 <---------ANAC46           <---------YAB1            --------->AHL20(2)           <- ------->YAB1<-----------HVH21             -------->P                --------->YAB1             <----   ataagaataattaaacgtgagggatagcaaagttagaactcaacttaccattatagtttgttctgttcgtataaaaatagaatgtatacttgtttcatct  596100                                                                            ----------->GT1                                     ------->GAMYB                         ----------->GT1                                     --------->ZAT18                 <---------HSFB2a(2)                                  ---------->DOF2                    --------->HSFB2a(2)                                  <-----------GT1                   ----------------->AGL1      <---------ARR11(3)  ---------->DOF2  <---------AtLEC2      <---------ARR14(2) --------ANAC58      --------->ZAT14--------->ANAC58           <---------MYB46(3) --------ANAC58     <----------DOF2 --------->ANAC58        --------->MYB52(1)                 ------ ------DOF2      <-----------GT1  --------->MYB52(1)        ------------>AtMYB77       <----------DOF2   ttcttgaagatgtatagtttcactttagtaaagaattaacgcactgcatgaagcatatgaactagcggttaccagaagagataaatattcttttaaaaaa  596200                           ------>ZmHOX2a(2)                          --------->At4g35610             --------->YAB1                         <---------ARR11(3)              <---------ATHB12                           <                         --------->ARR11(3)             --------->ANAC58                            <                       --------->ICU4                   --------->ANAC58                          <--                       <---------YAB1                  --------->WOX13(1)                     -------            --------->ANAC46             <---------HSFB2a(2)                                  ------- --->AHL20(2)--------->TOE2(3)           --------->HSFB2a(2)---------->DOF2    <----------DOF2<------   aatggtcatcatctacgtcaatgtcatgatctgtctaattcatcgagaaacttgtggcaatcaaaagagaaacagaagaagctttagttttataaattcg  596300                                   --------->AHL20(2)                                   <---------AHL20(2)                                   ----------->TBP                                 --------->AHL20(2)                                 ----------->TBP                             --------->AHL20(2)                        <---------AHL20(2)                        --------->AHL20(2)                                                          -                       --------->AHL20(2)                                                     -------                   <---------AHL20(2)                                                     -------->ATHB1             <---------AHL20(2) --------->AHL20(1)                                        <---------ICU4 ---------DAG2<---------AHL20(2)<---------AHL20(1)                                        --------->YAB1 ----------DOF2   <---------AHL20(2)                                                     <---------ATHB12 -------TOE1(2)   <---------AHL20(1)                                                   --------->WOX13(1) -------->AtSPL3  --------->AHL20(1)             --------->ZAT18              <---------At4g35610  *TSS -------->AtSPL8  --------->AHL20(2) <---------AHL20(2)        ----------->TBP--------->At4g35610---- -TEIL       --------->AHL20(2)--------->AHL20(2)<---------ZAT18   <-----------GT1   ------------>CBF   tactttattctaaaattaaataaaatttaaaaaatatatatatatgactagtgaacaaagtctctatatatacaagtttcttctgccttcaatcattcat  596400                                                                      <---------ICU4         <-------                                                                   --------->YAB1            <-------       --------------->AGL15                                      <---------YAB1          <---------AHL20(2) -------->ANAC46                                        <-----------GT1  ----------->GT1  <---------- -->YAB1                         ---------->DOF2        <---------AHL20(2)     <---------AHL20(2) ----->ARR14(2)       ---------->DOF2            ----------->GT1--------->YAB1 <-----------GT1   atacacaaaccccttagagaaacaaaaagaatacaaaaagaagagagagattagttattaacttattcataataagtgtaattacttcgtatttactttt  596500                                                                          --------->YAB1                                                                   <---------TOE1(3)                          --------->ATHB51                         <---------TOE2(3)                          --------->YAB1                         --------->YAB1                          <---------ICU4                        <---------YAB1                         <---------ATHB12                    --------->ICU4                     <---------ATHB12                        <---------YAB1      <---------At4g35610<---------ATHB51               --------->LBD16  <---------YAB1 <---------MYB46(3)  --------->ICU4        --------->At5g28300<---------ICU4 --DAG2    <---------ETT(2)       <---------At5g28300--------->MYB52(1)  --------->ICU4 ---DOF2   <---------ZAT18<--------ATHB1  ----------->GT1<---------MYB52(1)                     <---- -GT1 --------->At4g35610--------->ICU4<xxxxxxxxxxxxxxxxsmallRNA(i)<---------YAB1   <---------At4g35610   ttttggttagcagtcgactagtaatcaataatgggttactgcgatggtaaatggacaccggtgattattatggttatgatcaattcagcgctgggtttag  596600                                                                                            ------>MYB46(1)                                                                                            ------>MYB83                                   <-----------GT1                                        --------->MYB46(3)              ---------->DOF2  <---------ANAC46                                           --------->AtMYB61       <---------MYB46(3)   <---------AtMYB61                                 <---------------AGL15       ----------->GT1    <---------MYB46(3)             <---------ARR14(2)  <-----------------AGL3 <    <----------DOF2      <---------AtMYB61               --------->ARR14(2) ------->GAMYB<------NtERF2 -----At4g35610--------->DAG2  <---------ZAT6       ----------->RAV1(1)  <-----------GT1------>NtERF2   ctaatgctttggttaaaaaagtactcgatggtggtgttaaccatatggttatcgcaacatatcgtcttgctatttcaaccctatttttggcaccaatcgc  596700                                                                              --------->TOE2(3)                                                                              --------->TOE1(3)                                                                             ----------->GT1                                                                            <---------TOE1(3)                                                                            <---------TOE2(3)                                                                           <---------DOF5.7(2)                                                                           --------->MYB52(1)                                                                       --------->YAB1                                                                       --------->ATHB51                                                                       <---------ICU4                                    <---------ARR11(3)                 <--------ATHB1        <-------                             --------->TOE2(3)                         -------->HAHB4  -------->HAHB4                       <---------AHL20(1)                              <--------HAHB4  --------->ATHB12                       --------->AHL20(1)                             <---------ATHB51--------->ICU4             <--------P<---------AHL20(2)         <---------YAB1      --------->ICU4  <---------YAB1            --------->At5g28300 ---------->DOF2--------->ICU4         <---------YAB1<---------ICU4           ----------->GT1 <-------TEIL<----------DOF2              --------->YAB1  --------->YAB1 ---------AHL20(2)--------->AHL20(1)--------->ARR11(3)   <---------AHL20(2)<-----------GT1 ----------   atttttttgggaacggtaagtatattatattcattaaagaactttggtcttgatgatatatatatgtttgtaataattaacgttaaaaatgattcgttat  596800                                                                          --------->MYB52(2)                                                                         <-------TEIL                                                                      <------MYB46(1)                                                                      <---------ANAC58                                                            <---------ZAT18                                    --------->ARR11(3)      <---------ZAT14    <----------DOF2                             ------->GAMYB                  --------->ZAT14 <---------MYB52(1)                    ----------->RAV1(1)          <----------DOF2      <---------ANAC58        <------ZmHOX2a(1) --------->MYB52(1)     <---------DAG2  <-----------RAV1(1)                < --MYB52(1)       --------->DEAR3(2)<---------ARR11(3) <---------ZAT14<------MYB83                  - ->GT1<---------TOE2(3) <---------MYB52(2)     <---------At4g35610   <---------MYB46(3)       <------   atgttttttaggaaaacgagaccgacactaacgctcaacatcttggttcagcttttcttcagtgctcttgttgggttcgttctttttctaattttcgctt  596900  Previous    Next  AGI:  At4g01440.1    Description:  nodulin MtN21 family protein. similar to nodulin MtN21 family protein [Arabidopsis thaliana] (TAIR:AT4G01450.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO62855.1); contains InterPro domain Protein of unknown function DUF6, transmembrane; (InterPro:IPR000620) Range:  from: 596399    to: 598718    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version