Home
Tools
- Search
- Colocalization
- Gene Analysis
- Gene Identification
- Small RNA Targets
- MicroRNA Targets
Description
Documentation
Citations
Downloads
Publications
History
Contact
Links
Disclaimer
For complete usage of AthaMap please enable JavaScript in the settings of your browser!
Search
Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
Go to graphical and table display
1 10 20 30 40 50 60 70 80 90 100
-
<
--
---
---
---
---
---
<---------
ZAT14
--------
<---------
ZAT18
--------
---------->
DOF2
---------
--------->
At4g35610
--------->
HSFB2a(2)
---->
AHL20(2)
<---------
At4g35610
<---------
HSFB2a(2)
-----
AHL20(2)
--------->
ARR14(2)
<---------
YAB1
------>
ZmHOX2a(1)
----
AHL20(2)
<---------
ARR14(2)
<----------
DOF2
--------->
AHL20(2)
----------
-
AHL20(2)
<-----------
GT1
--------->
ZAT18
<---------
ARR11(3)
--------->
LBD16
>
AHL20(2)
<-----------
GT1
<---------
MYB52(1)
<---------
DAG2
<---------
YAB1
<---------
LBD16
atttcgcttaatataacaaattcaattac
ccgttctgcagaaagactgcgctttttggtattcttgatcaagataaattgaaatttttc
ctggaaaagcc
581100
------>
MYB46(1)
------>
MYB83
------>
GAMYB
---------
MYB59
<---------
AHL20(2)
------->
MYB46(3)
--------->
STY1(2)
--->
MYB46(1)
<---------
STY1(2)
----->
P
<---------
HSFB2a(2)
<---------
AHL20(2)
--->
MYB83
--------->
HSFB2a(2)
--------->
AHL20(1)
------>
ANAC58
--------------->
AGL15
<---------
WRKY18(1)
------>
ANAC58
----------------->
AGL2
--------->
WRKY45
->
ANAC58
<----------
DOF2
--------->
AHL20(2)
--------->
WRKY12
->
ANAC58
<---------
DAG2
----------->
GT1
<-----------
GT1
--------->
AHL20(2)
>
DAG2
---------->
DOF2
<---------------
AGL15
<---------
AHL20(2)
--------->
AHL20(2)
>
DOF2
----------->
HVH21
<-----------------
AGL3
<---------
YAB1
--------->
WRKY38(1)
<--
aaccaaatttgacatgacaaaagcacaacttttctataactagctagtataaaatttagatgttatattattcacattttgttgaccaaaaaaaaattat
581200
--------->
ANAC46
<-------
GAMYB
--------->
ANAC58
<---------
MYB46(3)
--------->
ANAC58
---------
GT1
<---------
GLK1(2)
--------->
AtLEC2
tcacattgtggaagaaaaattagtttggactctaac
tttggtcaaaagattgtcgttgctaagacaagaagtgagtttgatgaacaatccatgcaaaact
581300
-------
<-------
--------
<-------
--------
--------->
AHL20(2)
<---------
AHL20(1)
--------->
ANAC58
--------->
ANAC58
--------->
MYB52(1)
--------->
ANAC58
--------->
ANAC46
--------->
TOE2(3)
------>
ZmHOX2a(2)
--------->
YAB1
--------->
ANAC58
--------->
TOE1(3)
--------->
AGP1
--------->
AHL20(2)
--------->
AHL20(1)
--------->
AtMYB61
<---------
At4g35610
--------->
YAB1
--------->
AtLEC2
<-
tcaacctcagcctcgctaa
ctgcaaacccaaaacaatttagatgttatctgatctacaagctcgtgtaataatattctttctccatgcaatataatatat
581400
<---------
AtMYB61
--------->
ANAC58
--------->
ALFIN1
--------->
ANAC46
<------
ZmHOX2a(1)
--------->
ANAC55(2)
<------
ZmHOX2a(1)
--------->
ANAC58
-->
CCA1(2)
--------->
ANAC55(1)
----
--
AHL20(2)
<---------
WOX13(1)
--------->
ANAC58
<------
->
ARR11(3)
--------->
ATHB12
--------->
ANAC58
<------
--
AHL20(1)
<---------
MYB46(3)
--------->
DAG2
<------
->
AHL20(1)
<---------
ANAC46
<---------
ANAC55(2)
<---------
HSFB2a(2)
<---------
ARR11(3)
<---------
WOX13(1)
-----
ZmHOX2a(1)
<---------
YAB1
---------->
DOF2
--------->
ARR11(3)
<---------
YAB1
aggaggaggaagtggtggatgattgaagtagacgtaacttac
aaaaggtttgagaagcaagaagcgaaatgtcttcttgccttcttccttctaattgctt
581500
<----
---------
--------->
AHL20(1)
---------
<---------
AHL20(1)
<-------
TEIL
<---------
ARR11(3)
--------->
AHL20(2)
<------
MYB46(1)
----->
At4g35610
--------->
AHL20(1)
<---------
AHL20(2)
<------
MYB83
---
ANAC46
<---------
AHL20(1)
<-----------
TBP
<---------
TOE2(2)
---
ANAC58
------------>
CBF
<-------
TEIL
<-----------
TBP
<---------
TOE1(2)
---
ANAC58
<-----------
GT1
<---------
AHL20(2)
<---------
AHL20(2)
--------->
TOE2(2)
gctgcaaacacatcccat
tttactatatcaatatatatttcaaattccacatacatttaagtgtgtctatatatataggcatcaacgtaggtgcaagaaa
581600
<---------
At4g35610
<---------
ZAT2
--------->
ZAT2
<------
ZmHOX2a(1)
<------
NtERF2
<---------
RAP2.6(3)
------>
NtERF2
--------->
LBD16
--------->
ATERF1(2)
<---------
RAP2.6(2)
<---------
ATERF1(2)
----------------->
AGL1
<---------
AHL20(2)
---------->
DOF2
<-----------------
AGL1
--------->
AHL20(2)
------>
MYB46(1)
<-----------------
AG
---------
--------
CBF
------>
MYB83
<---------
LBD16
<--------
>
ANAC58
------->
GAMYB
<------------
CBF
--------->
At4g35610
<---------
AHL20(2)
>
ANAC58
<---------
MYB59
--------->
ALFIN1
--------->
RAP2.6(3)
----------->
GT1
ttgtggaatataaatctatttctaaccgaacaaattcgaaagtggaagggtttgtacattgccggcttaggaagctggagacaaatggtataatttatat
581700
<----------
DOF2
<---------
ANAC58
--------->
ARR11(3)
<---------
ANAC58
<---------
ARR11(3)
<-----------
GT1
------>
ZmHOX2a(1)
----------->
GT1
<
------->
TEIL
--------->
LBD16
<---------
GLK1(2)
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(si3)
>
AHL20(2)
<----------
DOF2
----------->
RAV1(2)
<----------
DOF2
<---------
AHL20(2)
-
AHL20(2)
<---------
ARR11(3)
<----------
DOF2
--------->
YAB1
<---------
TOE2(3)
-
cggaatttgatactagttctttttctatgaaacttcattttctttcctgagttctttaaacatattctttttctatggtttatattttcttgttgattca
581800
--------->
ANAC55(2)
x
<---------
ANAC58
xx
<---------
ANAC55(2)
--------->
AHL20(2)
<xx
<---------
ANAC58
--------->
At4g35610
xxx
<-----------
GT1
<---------
At4g35610
<xxx
<---------
ANAC58
<---------
MYB52(1)
<-----------
GT1
-----
<---------
ANAC58
<xxxxxxxxxxxxxxxxxxxxxxx
smallRNA(si3)
<----
<-----------
GT1
--------->
GLK1(1)
--------->
YAB1
xxxxxxxxx
<---------
AHL20(2)
xxxxxxxxxxxxxxxx>
smallRNA(s)
<---------
ATHB51
xxxxxxxxx
---------
AHL20(2)
---------->
DOF2
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(le3)
xxxxxxxxxxxxx
-------->
AHL20(2)
xxxxxxxxxxxxxxxx>
smallRNA(s)
<---------
ATHB12
<xxxxxxxxxxxx
aatttttttcttgttacttgatactcaaagcgggatgtccatgtccattagctcagtccaataatatccatttcgatattggacaaatagtgtctatgtc
581900
<xxxxxxxxxxxxxxxx
smallRNA(s)
<xxxxxxxxxxxxxxxx
smallRNA(i)
--------->
YAB1
<-------
TEIL
<---------
TOE2(3)
<xxxxxxxxxxxxxxxx
smallRNA(s)
<xxxxxxxxxxxxxxxx
smallRNA(i)
xxxxxxxxxxxxxxxxxxxxxx>
smallRNA(se3)
<---------
TOE2(3)
xxxxxxxxxxxxxxxxxxxxx>
smallRNA(le3)
xxxxxxxxxxxxxxx>
smallRNA(s)
--------->
ZAT2
--------->
YAB1
xxxxxxxxxxxxxxxxxxxxx>
smallRNA(le3)
----------->
RAV1(2)
xxxxxxxxxxxxxxxxx
smallRNA(fl3)
<---------
ZAT2
<---------
ATHB12
<xxxxxxxxxxxx
xxxxxxxxxxxxx>
smallRNA(s)
<xxxxxxxxxxxxxxxxxxxxxxx
smallRNA(fl3)
<xxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxx
smallRNA(i2)
---------->
DOF2
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(fl3)
--------->
ZAT6
---->
ZAT18
<---------
TOE1(3)
xxxxxxxxxxxxxxxx>
smallRNA(i)
<-----------
GT1
-----
ZAT18
<---------
DOF5.7(2)
<xxxxxxxxxxxxxxxxxxxxxxx
smallRNA(i2)
------>
MYB83
xxxxxxx>
smallRNA(i)
<-------
TEIL
<xxxxxxxxxxxxxxxxxxxxxxx
smallRNA(si3)
------>
MYB46(1)
------
xxxxxxx>
smallRNA(s)
--------->
TOE2(3)
xxxxxxxxxxxxxxxx>
smallRNA(s)
<---------
MYB59
<-----
xxxxxxxxxx>
smallRNA(si3)
<---------
YAB1
xxxxxxxxxxxxxxxxxxxxxxx>
smallRNA(si3)
<---------
AHL20(2)
xxxxxxxx
smallRNA(se3)
xxxxxxxxxxxxxxxxxxx>
smallRNA(se3)
xxxxxxxxxxxxxxxxxxxxxx>
smallRNA(se3)
---------
cactaaggtccatgtccattaacgttcatgctcattaaagctcatgtccaactgggctgtccaatgagcataacataaccaaattttaacacaatagtat
582000
Previous
Next
AGI:
At4g01420.1
Description:
CBL5 (CALCINEURIN B-LIKE PROTEIN 5). Identical to Calcineurin B-like protein 5 (CBL5) [Arabidopsis Thaliana] (GB:Q7FZF1;GB:O81328); similar to SOS3 (SALT OVERLY SENSITIVE 3) [Arabidopsis thaliana] (TAIR:AT5G24270.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ77528.1); contains InterPro domain Calcineurin B protein (InterPro:IPR015757); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Recoverin; (InterPro:IPR001125); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048)
Range:
from: 580038
to: 581518
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
printer-friendly version