Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                      <---------ANAC58                    <---------TGA1a                    <---------bZIP60(2)                    <---------ANAC58                 ----------->TGA1                 ----------->HVH21               --------->bZIP60(1)               <---------bZIP60(1)               <---------bZIP60(2)               <---------TGA1a               <---------ANAC58       <------ZmHOX2a(1) --------ANAC46--------->ANAC55(2) ----------RAV1(1)  <---------O2                                                             <------- ------->ALFIN1<---------ANAC55(2)                                                 --------->At4g35610 ---->ALFIN1   <---------ANAC58       <---------GLK1(2)                         --------->At4g35610 -----AtMYB61  --------->TGA1a <----------ID1                                   <---------At4g35610-- -----DEAR3(1) --------->O2 XXXXXXXXXXXXXXXXXXXX>MIR419   --------->ARR14(2)    <---------ZAT2    --- --DEAR3(1)    <---------O2<---------YAB1       --------->GLK1(2)     <---------AtLEC2     ----------   ggtgttggaggaatgggacgtgacgagtcatgaacgacaagaatgtcgagcttctgtcccgatgcgcattgagcatggtttgagctgatgaactagtgaa  569700              <-------GAMYB         <---------MYB52(1)        --------->LBD16                                                                            --       <---------ANAC55(1)                                                                        <--       --------->ANAC55(2)                                                                       <---       <---------ANAC46                                                                  <------NtERF2       <---------ANAC58             <---------REM1(1)                                   --------->LBD16       <---------ANAC58        --------->LBD16                                         <---------ANAC46    --------->ARR14(2)  <---------ANAC58           <------ZmHOX2a(1)                   --------->DEAR3(1)    <---------ARR14(2)  <---------ANAC58  <---------RAP2.6(2)                         <------NtERF2-- --ZAT6<---------ANAC55(2)    <---------LBD16 <----------DOF2                   ===================== --------->RAV1(2)      <---------ANAC46 --------->RAP2.6(3)                    ---------->DOF2  <--- ------>GLK1(2)   <---------YAB1    <---------MYB46(3)              <---------ARR14(2)--------->ATERF1(1) ->GT1<----------------------TaNAC69(1)--------->ETT(2)             --------->ARR14(2)<---------LBD16   aacctggttccgtgagggttacgatatcgtgtccagggttgtagacggctttaggagaagaagagtcgcagaactcgtattccaaagcgccggagacttg  569800          <---------AtMYB61          <---------TOE1(3)          <---------TOE2(3)      <-------GAMYB  <---------bZIP60(2)  --------->bZIP60(1)  --------->TGA2(1)  <---------bZIP60(1)  --------->O2                                  ------->MYC3  <---------TGA1a                               <-------MYC3  <---------ANAC46                             <---------O2  <---------TGA2(1)                            <---------ANAC46  ============MYC_MYB                          --------->O2  --------->TGA1a                            <---------ALFIN1  <---------O2                            --------->ANAC46 ----------->STF1                      <---------ARR14(2) --------->TGA1                        --------->GLK1(2)                                        <---- -------WOX13(1)                       --------->ARR14(2)                                       <---- ------ANAC58                         <---------GLK1(2)                              <----------DOF2 --------->HVH21                <------ZmHOX2a(2)                       --------->ANAC58        <---- ===========bZIP_DOF           <---------ARR11(3)               <----------DOF2<---------ICU4  ------ ------ANAC58   <---------YAB1 --------->ARR11(3)--------->ALFIN1       --------->ANAC58  <----------DOF2   agtgacgtcgttgaggttgtgattgtgttcgaagatcaaagaatccccaacgtggaacacaagtttcttttggcaaacaaattatgtcttttcttttggc  569900                                                                 ------>ZmHOX2a(2)                                                                <------ZmHOX2a(2)                                                               <---------ARR14(3)                   <                                                               --------->ARR14(3)                  <-                                                               <---------ARR11(3)                 ---                        --------->ANAC46                       --------->ARR11(3)                 ---                        --------->ANAC58                       <---------ARR14(2)        --------->ANAC46 -----ANAC58            --------->ANAC58      <---------ANAC58 --------->ARR14(2)        --------->ANAC58 -----ANAC58          ---------->DOF2         <---------ANAC46 <-----------ARR10         --------->ANAC58 -----ANAC46      ----------->GT1             <---------ANAC58 --------->AGP1        --------->MYB52(1) ---->ID1--------->AHL20(2)             <---------YAB1         <---------AGP1      <---------MYB52(2)   gtttttctcatatatataggtagtaaaagcaatggaatgctcacgattccttgaaaaaaaaacaagatcttatttgcaaaacaaaactaacaagaaacaa  570000                                                                                            --------- --------->ATHB12                                          <---------ANAC58                 --------- ---------YAB1                                             <---------ANAC58            --------->ANAC58 --------TOE2(3)                                      <---------GLK1(2)                --------->ANAC46 ------>YAB1                                 <---------ARR11(3)                        --------->ANAC58 ------>MYB52(1)                             --------->ARR11(3)              ----------->GT1---------   taacgattgagaaccaagtctctatagttgataaactgggcttatgaaatcttgtagattgtcttgttatgcccataaactgaaaatacacgccaagcac  570100                                 --------->bZIP60(2)                               --------->ANAC58                      --------->SPL7                      ------->TEIL                      <-------TEIL                   --------->ANAC58                   --------->ANAC55(1)                   <---------ANAC55(2)                   --------->ANAC58                   --------->ANAC55(2)          --------->ANAC46                   --------->ANAC46     --------->ANAC46                              <---------GLK1(2)                  --------------->AtSPL3--------->ANAC58                            --------->ARR11(3)                 <---------ALFIN1--------->ANAC46                                   --------->AHL20(1)                <xxxxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                           <---------ARR11(3)               ----------->RAV1(1)      --------->ANAC58                 --------------->AtSPL8       --------->At4g35610<---------ETT(2)      <---------RAP2.6(2)      <---------------AtSPL8       <---------At4g35610--------->ETT(2) <---------ICU4      --------->MYB52(2)  <---------AHL20(2) >ANAC58    --------->ANAC58   <---------ALFIN1 <---------ANAC55(2) --------->ANAC55(2) >AtLEC2    --------->ANAC46   --------->ANAC58 --------->ANAC55(2) <---------ANAC55(2)            -- >ANAC58    --------->ANAC58<---------REM1(2)  --------->RAP2.6(3) <-------TEIL  <-----------TBP   <-   atcatcttcatctccagcaacacgtacgtcgacacacatcacaagtcattacggcatcagtagcttagttacataatagtactatatatattctccagca  570200                      <---------ANAC58                      <---------ANAC58                                          <---------ALFIN1             ----------->TBP                                                    ----------->RAV1(1)             <---------YAB1                                                  ------->GAMYB         --------->TOE2(3)                  --------->At5g28300            --------->At4g35610        --------->ANAC46                   ----------->GT1                 <---------At4g35610    ---        --------->ANAC55(2)             --------->MYB52(1)          ---------->DOF2             -----       <---------TOE1(2)       --------->AHL20(2)      --------->ANAC58  <---------WRKY12      ------       <---------TOE2(2)   <---------YAB1 --------->ZAT6        --------->bZIP60(1)   --------->DAG2 ------->AHL20(2)<---------ICU4<-----------TBP         --------->ANAC58  <---------WRKY38(1)   ------ --------AHL20(2)<---------AHL20(2)  <---------At4g35610        <---------bZIP60(1)  ---------->DOF2-   ttttattcatacgttataaatatttcttgctgattatatagctaacagtaattagagacggaaatgacatcaaagtcaactcccacataaagcttatcct  570300                                                     <---------ANAC58                                         --------->LBD16                       ------>MYB46(1)                                        --------->ANAC58                       -------->P                                        --------->ANAC58                  --------->ANAC58                                        --------->ANAC46            --------->ZAT18              <---                                       <---------LBD16              <---------ZAT18--------->LBD16      --------->MYB52(1)             --------->ARR14(2)         <---------ARR14(2)--------->ANAC58   ------>MYB83                     --------->GLK1(1)<---------ANAC58     ------>MYB46(1)        <---   ------>MYB46(1)                  <---------GLK1(1)<---------ANAC46     ------>MYB83         ------ --------------->AGL15           --------->ANAC58    <---------RAP2.6(2)  --------->ANAC46  <-------- ------>REM1(1)                  --------->ANAC58    <---------DREB2C(2)  --------->ANAC58  --------- ->ZmHOX2a(1)            --------->STY1(1)   --------->ANAC58   --------->ARR14(2)--------->ANAC46 --->TOE2(3)         <-----------------AGL1  --------->ANAC58  <---------GLK1(2)  --------->ANAC58  < --->TOE1(3)       --------->ARR14(2)<---------ARR14(2)<-----------HVH21<---------ALFIN1    --------- ---------------->AGL3   <---------STY1(1) ---------->DOF2  <-----------RAV1(2)------>MYB83----------   tcaccaaataagggtcatcaagttcccctagaggcatgaaatccgcaaagccatggcggtcatcaggttctgcaccaagccaacccgaaactatacgtac  570400     ---------->DOF2 --------RAV1(2) ------LBD16 ->TEIL                         --------->AtLEC2 -ANAC55(2)                ------->GAMYB >ANAC46                   --------->YAB1                                                   <-------- ------ZmHOX2a(1)         --------->MYB46(3)          --------->YAB1                       ------>ZmHOX2a(1) >ANAC55(2)<---------------AtSPL8                <---------HSFB2a(2)                       ========== ----->AtSPL3           <-----------GT1          --------->HSFB2a(2)                <---------YAB1   caggagaaaaagattagtactgtatttaaccatcatgcatcacaagactttccaaaacataataaacacatacttgttttctcaacatgattcctgctaa  570500               --------->At4g35610               <---------At4g35610                 --------->ATHB12               <---------ZAT2                      -------->ATHB1               --------->ZAT2                      --------->ATHB51              ------->TEIL <---------ANAC46       <---------YAB1              <-------TEIL           --------->ANAC46<---------ANAC58      <----------DOF2             --------->CCA1(2)           --------->ANAC58<---------ANAC55(2) <---------ZAT18          <---------MYB52(1)     ------   ------>ZmHOX2a(2)       <---------ANAC58    <-------TEIL     <---------STY1(1)        --------->ATHB12 -At4g35610--------->ANAC58--------->ANAC55(2) --------->ZAT18  --------->STY1(1)       --------->ICU4 =========HOX2a_HOX2a------->TEIL        <----------DOF2      --------->TOE2(3)  --------->ANAC46<---   cttgatccaatacacgcagcttgaacctcgcgtaagttttagtctttggtgcattattgacaaaccctagtgccgatagatacacagaaaatgatttgtc  570600  Previous    Next  AGI:  At4g01380.1    Description:  plastocyanin-like domain-containing protein. similar to copper ion binding / electron carrier [Arabidopsis thaliana] (TAIR:AT1G45063.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22525.1); contains InterPro domain Cupredoxin (InterPro:IPR008972); contains InterPro domain Plastocyanin-like; (InterPro:IPR003245) Range:  from: 569148    to: 570076    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g01390.1    Description:  meprin and TRAF homology domain-containing protein / MATH domain-containing protein. similar to meprin and TRAF homology domain-containing protein / MATH domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G00780.1); similar to unknown [Populus trichocarpa] (GB:ABK94833.1); contains InterPro domain MATH (InterPro:IPR002083); contains InterPro domain TRAF-like (InterPro:IPR008974) Range:  from: 570242    to: 571595    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version