Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100            <---------MYB59         --------->ANAC46    --------->ANAC58    --------->ANAC58 <---------ZAT18 -->ZmHOX2a(2) ----ARR14(2)                                                          <------ZmHOX2a(1) ------ARR10                                                          ----------->GT1 --->ARR14(2)                      ------>ZmHOX2a(1)           <----------DOF2                 ------ --->ARR11(3)  <----------DOF2    --------->TOE2(3)    <-----------RAV1(1)         --------->AtLEC2   ctggccactctacataactttcatctagcctctcatccttatctagataaacaaaatatgtggccctttgataggaaaaaatttcattcaaaaaatgcaa  550000                    --------->MYB52(1)                <-----------GT1          <---------AHL20(2)         <---------AHL20(1)         --------->AHL20(2)                                                                        --         <---------AHL20(2)                                     --------->DAG2                     <-      --------->ATHB51    ----------->GT1                      ---------->DOF2                    ---      --------->AHL20(2) ------->TEIL                      --------->YAB1                       <---- ---->DOF2--------->AHL20(2)   <---------YAB1             <---------YAB1  <----------DOF2    <-------   aggcagaataatttaattttacaaacgaatgttattaatgcagtctatagtctcttcggtataataaaagtgattccttttctccaaaaactattttgaa  550100                                                          <---------AGP1                                                          <---------ARR14(2)                                                          <-----------ARR10        <---------ARR11(3)                                --------->ARR14(2)    ---------->DOF2                                      <---------CCA1(2)        --------->ARR11(3) ------->ARR11(3)                            --------->YAB1 ------>ZmHOX2a(2)    --------->YAB1     - --------ARR11(3)                            --------->WOX13(1)     --------->ZAT18                <- ------>YAB1                              --------->TOE2(3)<------ZmHOX2a(2)   <---------WOX13(1)---- -----WOX13(1)                          <-------TEIL  <---------LBD16 ------->TEIL<---------ARR11(3)< --YAB1 --------->ARR11(3)          ------->TEIL--------->YAB1      <---------ZAT18            ------   tgatattaaagctcttaaatagcaatacactaaaaacgtagcttcattaatcaaaactcggatctaaatgtgtacttagtgaatgatattagtagagaat  550200                                                                            <---------TCP15(1)                                                                           <---------PCF2                                                                          <------MYB46(1)        <---------ALFIN1                                                  <------MYB83      <---------ALFIN1                                                   --------->MYB59            -      ----------->RAV1(1)            --------->MYB52(2)                  <---------TOE1(2)       ----     --------->ANAC46      --------->At4g35610                        --------->ANAC55(2)        <---    --------->LBD16        <---------At4g35610                        <---------O2              <----   --------->ANAC46     <---------MYB52(1)                         ===============================HOX2a_HOX2a -------->ARR14(2)     <-----------HVH21                           <------ZmHOX2a(2)            ----- --------CCA1(2)       <-----------TGA1             <---------MYB52(2)<---------ANAC55(2)       <---- ----->YAB1  --------->DOF5.7(2)    <---------TOE1(2)             <-----------HVH21     ---------->ID1 ---------ARR14(2)    --------->ANAC46    <---------YAB1      <---------LBD16          <-----------GT1 --->GLK1(2) <---------MYB52(1)    <---------MYB52(1)       <---------ALFIN1--------->PCF2 ------>ZmHOX2a(1)   catatccccaacaccgttatctctccgtcatctcatcgtttgtttttattacaaacaaaccccctcgggatcacgtaggtcccactatttttcctcttaa  550300                                    <------NtERF2                                   ------>NtERF2                                   <-----------TGA1                                   <-----------HVH21              <---------MYB52(1)   <---------RAP2.6(3)             <-----------TGA1     --------->DEAR3(1)             <-----------HVH21    --------->ANAC46             <---------RAP2.6(3)  <---------ATERF1(2)                              <---------ALFIN1    ----------->GT1               --------->RAP2.3(3)                              --------->ANAC58   ----------->GT1               --------->RAP2.3(1)                            --------->ZAT18 --------->DOF2         <---------ALFIN1                                        <---------ZAT18 ----------->AGL15      --------->ANAC46                           <---------At4g35610     <---------CCA1(2) ------------AGL15    --------->AtMYB61      --------->ANAC46      <---------ZAT2  --------->ANAC58 -------------AG      <---------ALFIN1      <---------LBD16        --------->At4g35610   --------->YAB1 ------------>AG    <---------At5g28300<---------MYB52(2)  --------->GLK1(2) --------->ANAC58 -------------AGL1 <-----------GT1--------->RAP2.6(2) ---------->DOF2        --------->ANAC58   ctaaaagggtaataccgtcatttaccacacctctcgccgtcactaacacggagagagaaagaatcagacagctcatcccaagcacacacactcatatcag  550400                                                                                     <---------AHL20(2)                                                                                    <---------AHL20(1)                                                                                    --------->AHL20(1)                                                                                    --------->AHL20(2)                                                                                    <---------AHL20(2)                                                                                 <---------AHL20(2)                                                                                 <---------ICU4                                                                                 --------->AHL20(2)                    *TSS                                                         <--------ATHB1                  --------->ZAT14                       <---------AHL20(2)      --------->ICU4                  <---------ZAT14                      <---------AHL20(2)       <---------YAB1                --------->ANAC46          <---------AHL20(2)           ---------->DOF2            ----------->RAV1(1)          --------->AHL20(2)   <-----------RAV1(1)--------->ATHB51           --------->ANAC46           <----------DOF2  --------->AHL20(2)     --------->YAB1         --------->ANAC46        <----------DOF2       <---------AHL20(1)  --------->YAB1   aaaatacacagacacaacacaacactgagagagagcttttcttttaaattccttcaatttttttttgttgttgtaaagaataataatttattcgattgaa  550500                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                    -                                          <---------ARR14(2)                                       <-                                          --------->ARR14(2)                                       --                                        --------->LBD16                                            <-                     <-----------GT1  <---------LBD16                          <-----------TGA1    --             <----------DOF2        --------->ARR14(2)                       ---------->ID1  --------       <---------ANAC58             <---------ARR14(2)                      <-----------GT1  --------       <---------ANAC58        ----------->RAV1(2) <---------GLK1(2)<---------MYB52(1)     ----------   tttgtttattcgtgtctttgtttttactcaatcccctgtttccggttctgttcgattcttctctgtctctgttttgtttttcgtcattttgcctaaagcc  550600                                                                          <------NtERF2   ----------->RAV1(1)                                                   ------>NtERF2 -------->ANAC58                                                         ----------->RAV1(1) -------->ANAC58                                                        <---------ETT(2)--------->ARR14(1) -------->AtLEC2                                                        ----------->HVH21<-------TEIL -------->ANAC46                  <---------ARR14(2)                    --------->DEAR3(1) ------MYC3               <---------YAB1               ----------->GT1 --------->RAP2.3(1) ----->MYC2             <-----------GT1              ---------->DOF2  ------>NtERF2     --------->CCA1(2) ------MYC2            <---------YAB1              --------->LBD16    --------->LBD16  --------->ARR14(2) ----->MYC3            <---------AHL20(2) <---------YAB1    --------->KAN4(2)          <---------ARR14(2) ->ANAC58    <-----------GT1<-----------GT1      <---------LBD16<----------DOF2        --------->ARR11(1) ->ANAC58    --------->MYB52(1)   --------->ARR14(2)<------NtERF2    <---------LBD16   <---------GLK1(2) >DOF2     <---------WOX13(1)    <---------CCA1(2)--------->LBD16   <---------LBD16   <---------HSFB2a(1)   acatgcaacagtgattaactgaatttttattatccatatccattttgattcgccggaaagtttattcttttccggcgacaaatgcgaaagattcgaaaac  550700                                                                                  <----------DOF2                                                                                 ------>ZmHOX2a(2)                                                   --------->YAB1              <---------ARR11(3)                    ----------->TGA1              <---------ATHB12             --------->ARR11(3)           <---------ATHB12                     --------->WOX13(1)       ------>MYB83         ------>MYB46(1)                  ------>ZmHOX2a(1)           --------->MYB46(3)         ------>MYB83--------->YAB1       <---------YAB1  ------->GAMYB  ------>MYB46(1)  ---------->DOF2    <-----------GT1 ----------->HVH21   --------->YAB1--------->MYB46(3)----------->RAV1(1)    <-----   ccattttaaccaaatcaattctatgacgatgtctatattcaatcctgattcaatcaacaacgagctatcgaaaccaacatcgatctttggtctaaagctt  550800                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                               ------                                                                                              <------                                                                                              <------                                                                                             --------                                                                                             --------                                                                                             ========                                                                                             <<<<<<<<                                                                                             --------                                                                                             --------                                                                                             <-------                                                                                             --------                                                                                             --------                                                                                             <-------                         ------>ZmHOX2a(2)                                                   --------                        <---------GLK1(1)                                                    <-------                        --------->GLK1(1)                                               --------->ANAC46                        <------ZmHOX2a(2)                                               --------->ANAC58                       --------->ARR11(3)                                               --------->ANAC58                       <---------ARR11(3)                                              --------->SPL7                       --------->ARR14(2)                                             <---------MYB52(1)                       <---------ARR14(2)                                    <------NtERF2   --------       --------->At4g35610                                                  --------->LBD16  <-------       <---------At4g35610                                                 --------->DEAR3(1)--------   <-----------HVH21  <------ZmHOX2a(1)         <----------DOF2           <---------LBD16------------ -----DOF2      <-----------GT1    <---------WRKY38(1)           <-----------GT1 <---------ARR14(2)   tgggtcgtcatcggaattttactaggatctcttatagtcatcgctctcttctttctctccctctgtttaacctctcgccggagaaaccgtaagccacgtc  550900  Previous    Next  AGI:  At4g01328.1    Description:  unknown protein Range:  from: 550233    to: 550376    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g01330.1    Description:  protein kinase family protein. similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G01540.2); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G01540.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39661.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) Range:  from: 550420    to: 552941    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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