Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                    --------->DOF5.7(2)                  <---------MYB52(1)               <------NtERF2               --------->RAP2.3(1)              --------->ABI4(1)              ------>NtERF2             --------->RAP2.3(3)             --------->RAP2.3(2)             --------->DEAR3(1)             <---------DEAR3(1)             --------->RRTF1(3)            --------->RAP2.3(1)            --------->ATERF1(1)            --------->ORA47(2)            --------->ERF1                      ---------->DOF2            --------->RAP2.6(1)             --------->GLK1(2)          --------->ANAC46                 <---------GLK1(2)          --------->ANAC58                 --------->ARR14(2)              <---------LBD16          --------->ANAC58                 <---------ARR14(2)       --------->AtLEC2         --------->SPL7                  <---------TOE1(2)          --------->ANAC46        ------->TEIL <---------ALFIN1<-------GAMYB      --------->GLK1(1)               --------->ANAC58       <---------GLK1(2) -At4g35610<---------RAP2.3(1)     <---------GLK1(2)                --------->ANAC58 <-------TEIL   cttccacctcttacgccgccgttatctcgcttcgtcggaatcccagattccaaagaacccatttctatacatgcaactctggagagattcactgaatctc  512400                           --------->ANAC58                      --------->ANAC58                                                          -----                ------>MYB46(1)                                                                ------                ------>MYB83                                                                   ------                -------->P --------->ANAC58                                              --------->ANAC58               --------->MYB55(1)                                                ------->TEIL  ------              <---------MYB111(1)                                         <-------TEIL   --------->ANAC46              <---------MYB59                --------->TOE2(3)          <---------ARR14(2)     <-----              --------->TOE1(2)      --------->ARR14(2)                 --------->ARR14(2)  ---------           <-----------GT1 --------->ANAC46------>NtERF2                --------->ARR11(1)  ------->TEIL  --------->ANAC58    --------->ANAC58    <---------ALFIN1            ----------->ARR10  --------->ANAC58  --------->ANAC58--------->AtMYB61  <---------ARR14(2)  <---------ATHB12--------->ARR14(1) <--------   aaacaagaaaatgtaacctaccacaagctaagcaactcaaatccccacctaaatttccaatctataaccaagtagattcgatgaatctcaaacgcatccg  512500                                        --------->ATHB12                                       --------->ICU4                                  <---------MYB46(3)                                 <---------DEAR3(1)                              <---------DEAR3(1)                             <---------ZAT14                  <---------HSFB2a(2)  <---------YAB1                                         <------     --------->HSFC1(2)      --------->ZAT18                                   <---------ANAC46     <---------HSFC1(2)    <---------SPL7                                      <---------ANAC58     <---------HSFB2a(1)  <---------ANAC46                              <---------ZAT14<---------ANAC58     --------->HSFB2a(1)  <---------ANAC58                              --------->ZAT14<---------ANAC58 ------>RAV1(1)--------->ARR11(3)<---------AtMYB61                  --------->ZAT6   --------->GLK1(2) --->ANAC46   <---------GLK1(1)  --------->ALFIN1                 <-----------GT1   <---------GLK1(2) ----->HVH21  --------->GLK1(1)<---------ANAC46                   --------->YAB1  ----------->ARR10 ->GAMYB  <---------HSFC1(1)--------->ALFIN1                   --------->YAB1  <---------ANAC58   --- ----ETT(1)--------->LBD16<---------ANAC58                  --------->YAB1 --------->At4g35610<------ >ARR14(2)--------->HSFB2a(2)--------->SPL7                --------->At4g35610<-------TEIL  <-------- -ARR14(2)<---------HSFB2a(2)<---------ABI4(1)          --------->At4g35610<---------At4g35610-------   acacagaaaattccagaaatctcgaactgcgtgcggtggtgatgattaagtagagagcatcagcataataacagtacagatgcgtagattcttgtgagct  512600                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                                 ----     --------->ANAC58                                                                         <------     --------->ANAC58                                                                <---------ANAC46    --------->DAG2                                                                   <---------ANAC58   ---------->DOF2                              <---------WRKY12                     <---------ANAC58 ---At4g35610                                   <<<<<<<<<WRKY18                  <---------GLK1(1) -------->GT1                              --------->ARR14(2)                    --------->GLK1(1) ---ZAT2       <---------At4g35610    --------->At4g35610                       <---------ARR14(2) -ZAT18 ---------->DOF2       ---------->DOF2 --------->TOE2(3)                 <---------GLK1(2)---- -->At4g35610  --------->At4g35610   --------->GLK1(2)       ---------->DOF2    --------->ARR14(2)  <   tagtaaaaagcaaagtaagcagagagaagagagaaagagaagctgtatcgtcaatggaagaatcaaaggagactacaaatcggatttgcgtttcgaagca  512700    <---------ARR14(2)    --------->ARR14(2)       <----------DOF2    <---------GLK1(2)       <---------ANAC58  --------->LBD16           <---------ANAC58 <---------ANAC46      <---------ICU4 ------ZAT2          <-----------ARR10                                                   ----------->HVH21 ----->At4g35610     --------->GLK1(2)                                                 <---------ANAC58 ------At4g35610     <---------ARR11(3)                                      <---------AHL20(2) ----->ZAT2          --------->ARR11(3)          <-----------GT1            --------->AHL20(2) ---At4g35610       <---------GLK1(2)          <-----------GT1  <----------DOF2   *TSS <---------ANAC58 ------->RAV1(2)  --------->ANAC58            <---------ICU4 <-----------GT1<---------AHL20(2) ---------LBD16   --------->ANAC58    <----------DOF2 <----------DOF2       <---------AHL20(1)      -   gctgcggattcgcagggagcaagaatctttgcttctctgtctttctaattttcactctttttttttctttcttatcaattttttttttggtgtgactgaa  512800                 <---------AHL20(2)                --------->AHL20(2)               <---------YAB1            --------->AHL20(2)          ------>ZmHOX2a(1)          <----------DOF2                                                       <---------TOE2(3)       <---------YAB1                                    ----------->GT1    <---------YAB1      <-----------GT1                          <---------AHL20(2)         --------->AHL20(2) --------->AHL20(2)                        <---------AHL20(2)             --------->ATHB51 <---------AHL20(1)                        --------->AHL20(2)            <---------YAB1 <---------ARR11(3)                       <---------AHL20(1)           --------->YAB1 --------->AHL20(1)               --------->ANAC58<---------HSFB2a(2)  <---------ICU4 <---------AHL20(2)               --------->ANAC58--------->HSFB2a(2) --------->ICU4 --------->ARR11(3)      --------->REM1(1)--------->AHL20(2)          <---------ATHB12 -------->AHL20(2)     <-----------GT1    <---------AHL20(2) <-------TEIL--------->ICU4           <--   aaatatattatccttttattatatgttacaacttagacgcataatttaatttatggaacgagttacatagaaatcattatttatggaaattgggatttag  512900                          --------->LBD16                                                       <----                       <------ZmHOX2a(2)                                                        <----                       --------->CCA1(2)                                                        -----                      <---------ARR11(3)                                                        =====                      --------->ARR11(3)                                               <---------ATHB12                      --------->ARR14(2)                                              <<<<<<<<<<<<<<<                      <---------ARR14(2)                                              ------>MYB46(1)           <---------AHL20(1)                                                         ------>MYB83           --------->AHL20(1)                                                       <---------MYB59 -          --------->AHL20(2)                                                --------->ALFIN1    -----       --------->YAB1 <---------AGP1                           ======================================      --------->AHL20(2)------>ZmHOX2a(2)           --------->ANAC58        <---------ANAC58    -----      --------->ICU4 <---------CCA1(2)              --------->ANAC46        <---------ANAC58    -----      <---------ATHB12--------->AGP1   --------->CCA1(2)       ---------->DOF2  ----------->HVH21<--- -------ICU4--------->AHL20(2) --------->AHL20(2)   --------->ANAC58      --------->ALFIN1     ------   taattgcaataaatatatatatcagatctgggaataaatagatttgagtaacacacgaatgaatgaaaagtctagagtgtgtgtgaccaaacaatgggac  513000      <---------ANAC58 -----bZIP60(1) -----TGA1a ---->bZIP60(1)                       --------->ARR11(3) ==========bZIP_DOF             <---------TOE2(3) <<LFY<---------ANAC58    --------------->AGL15                   --------->ARR11(3) --------->DOF2          <-----------------AGL1                   <---------ARR11(3) ---->TGA1a              <---------YAB1                       ---------->DOF2 =====bZIP_DOF     <---------YAB1----------->GT1 --------->At4g35610 ---->ANAC58      <---------TOE2(3)   <---------ARR11(3)  ------>ZmHOX2a(1) ---->ANAC58<---------AHL20(2) <---------LBD16  --------->ANAC46--------->DAG2                      - --------HVH21  <---------AHL20(2)--------->At5g28300 --------->ARR14(2)                   --------->ANAC55(2) --->SPL7   --------->AHL20(2) <---------At5g28300  --------->At4g35610      ----------->GT1       --   gtcaaagagcgtatttaatttatgtttatcatttacggtaaatcttacataagcagcatcctccaaaaggtctattagattgtaaaattagtcacatgtt  513100                        <---------YAB1                   ------>MYB83                 --------->MYB46(3)                 <---------MYB55(2)                       --------->PCF2                --------->ANAC58                          --------->PCF5                --------->ANAC46                          <---------ARR14(2)     <-----------HVH21      ----------->GT1 --------->YAB1     ----------->GT1  --------->TCP16(1)  --------->ZAT2   --------->ALFIN1------>MYB46(1)      <---------YAB1    --------->ARR14(2)  --------->At4g35610 -------->DAG2  --------->ANAC58  <---------AHL20(2)     <---------TCP16(2)   <---------At4g35610 -------->DOF2 ------->GAMYB      --------->AHL20(2)    <---------ZAT18       <---------ZAT2       --   ataaagtgtggaaataacacccaactataattcaaaataaatatgtttaatactcttgtggaccctcgtattcatatgctagctgtcagtatttgtttcg  513200                               <---------HSFB2a(2)                               --------->HSFB2a(2)                         <---------------AGL15                         --------------->AGL15                        ----------------->AG            --------->ANAC46                        ----------------->AGL2   ------>MYB83                         <---------ALFIN1                 --------->ANAC58                ------>MYB46(1)                 --------->YAB1     <---------TOE2(3)  ----------------->AGL1 <---------MYB59                  <---------ATHB12----- ------->AHL20(2)--------->ANAC58        --------->REM1(1)           <---------AHL20(2)     <--------   attatttaagaaatttcagacccaataccaattctagtagtctacattaccaaattcaactcaactcgtattgaattagccaataacaacacctcttcac  513300  Previous    Next  AGI:  At4g01210.1    Description:  glycosyltransferase family protein 1. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G04480.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN69310.1); similar to hypothetical protein OsJ_002555 [Oryza sativa (japonica cultivar-group)] (GB:EAZ12730.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39699.1); contains InterPro domain Glycosyl transferase, group 1; (InterPro:IPR001296) Range:  from: 507738    to: 512782    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g01220.1    Description:  similar to RGXT1 (RHAMNOGALACTURONAN XYLOSYLTRANSFERASE 1), UDP-xylosyltransferase [Arabidopsis thaliana] (TAIR:AT4G01770.1); similar to putative alpha 1,3-xylosyltransferase [Linum usitatissimum] (GB:AAZ94713.1); contains InterPro domain Reticulon; (InterPro:IPR003388) Range:  from: 513213    to: 515853    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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