Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                               <---------------AGL15                                                             --------------->AGL15                             --------->DAG2             <----------DOF2       --------->ZAT6                         --------->TOE2(3)             <---------DAG2      <---------ZAT18         ------>ZmHOX2a(1)  ---------->DOF2        ----------->HVH21       <---------ZAT14    --------->YAB1--------->ANAC58                 --------->WRKY38(1)     --------->ZAT14    <---------ICU4--------->ANAC46            --------->ANAC58             --------->ZAT18       ---- --------->YAB1   --------->ANAC58            --------->ANAC58    ---------->DOF2                ---- ---------YAB1--------->ANAC58         --------->At4g35610  ----------------->AGL1             ------ ------>YAB1  --------->ANAC58       --------->YAB1--------->WRKY12   ---------->DOF2         -------   ttataatcatcctctctcgcaagccatccataaagcttatcatctctcaagcgatgaccttttccaaacaaagaaagtgaactctatcaatgtcaataaa  503000                                                                                                <----       <----------DOF2           <-----------GT1                                                ----- ----->ANAC58                   <-----------GT1                --------->YAB1     <---------AtLEC2  - ----->ANAC58               <----------DOF2         --------->RAP2.6(3)           <---------ANAC58  < ---->DOF2                 <---------DAG2          --------->MYB52(1)             <---------ANAC58 -- -->YAB1                <-----------GT1           ----------->HVH21    <----------DOF2    <----------DOF2   agcaaatgacttttaaaaacaatgttttaccttttttccaatctctcttcccatgacggtctaaatcaaaactcttttcgaattgcatggcgctttcgaa  503100         <----------DOF2   --------->ANAC58                                                     <----   ---------->DOF2         --------->ANAC58                                                     ----- -----ARR14(2)           ---------->DOF2                                                        ----- ---->ARR14(2)          ------->GAMYB                                                   <-----------HVH21 ----->ZmHOX2a(1)       --------->AtMYB61                                              <----------DOF2 ----------DOF2        --------->MYB46(3)                                         <-----------GT1 ------->TOE2(3) <---------ARR14(2)                                     <-----------RAV1(1)     <----   tcctttaaagtctttagcgaattcaaccaaagcaaaaccagtatgtcccttggtattccaaatgggtttgactcttgttggattaaaccctttcagagtg  503200         --------->MYB52(1)        ----------->HVH21                                   <------MYB46(1)      --------->bZIP60(1)                                   <------MYB83      --------->ANAC55(2)                                 <---------MYB52(1)      --------->O2                                  --------->bZIP60(2)      --------->ANAC55(1)                    --------->HSFB2a(1)      --------->ANAC58                       <---------HSFC1(2)      <---------ANAC55(2)                    <---------MYB46(3)<-------TEIL      ------>MYB46(1)      --------->ANAC46<----------DOF2   <-----------RAV1(2)<---------MYB46(3)    -------->P      <---------bZIP60(1)  <---------ANAC58  --------->HSFC1(2)--------->SPL7    ------>MYB83      --------->ANAC58<---------DAG2 ------>NtERF2<---------ALFIN1             --------->MYB46(3) -----ZAT18       --------->MYB46(3)----------->HVH21--------->TOE2(3)         --------->AtMYB61 ---->ZAT18   --------->WRKY12      --------->DEAR3(1) <-----------RAV1(2)--------->HSFB2a(2) ---->ZAT14 --------->TOE2(3)       <---------ETT(1)--------->ANAC46<---------MYB46(3)      <-------- -----ZAT14<---------ANAC46<---------ANAC58  <---------HSFB2a(1)  <---------MYB52(1)      -----------   aactcatcacgtaacgttgaaccgcttttgcctactctccgaccagatggttccacctcagttggtacgttggctactagaccaacccatggccacacat  503300                      --------->ZAT14                      <---------ZAT18                  <---------HSFB2a(2)                  --------->HSFB2a(2)                               ------>ZmHOX2a(1)         <------MYB83 <---------ZAT14                   --------->ZAT2    <-----------RAV1(1)     <-----------RAV1(1)                                <---------ZAT2 <----------DOF2 -ALFIN1<---------AtMYB61                               <---------At4g35610         <<<<<<<<<TBF1   - >RAV1(1)<------MYB46(1)                                --------->At4g35610 ---------->ID1        ---   atcgtttttgttggtcttgtccagaacactcgttgttgttgttcatctctgatgtctcagctacaaattcctgcttttgttgtttcttcttcatcttaaa  503400                                                                                              <------                                                                                             <-------                                                                                             --------                                                                                       <---------ANAC58                                                                                    <---------WOX13(1)             <---------GLK1(1)                                                     <------------CBF             --------->GLK1(1)               <---------ICU4                       --------->ATHB12      ---------->DOF2                        --------->YAB1                       <---------ICU4     --------->AHL20(2)      <---------YAB1 --------->ICU4          <-----------RAV1(1)<---------ANAC58 ----------->CBF         <---------GLK1(2)--------->YAB1    --------->YAB1       <---------AHL20(2) ------>TOE1(2) ------------>CBF        ------------>CBF    <---------ICU4       --------->AHL20(2)   cctgcaataaaagagatttccaattcagattatacttccaagaacaataatcaaacgcagaaacatgactatgttggaatctattaattgcttaatatca  503500                                                           --------->MYB52(1)                                                        --------->ANAC58                                                        <---------ANAC55(2)                                                        --------->ANAC55(2)                                             <---------ARR11(3)                          <------ZmHOX2a(1)                                             --------->ARR11(3)                   <---------SPL7>>>>> ---YAB1                                     <---------GLK1(2)        >>>>>>>>>TBF1  <---------TOE1(1) --ARR11(3)                                ----------->ARR10      <------ZmHOX2a(1)  <---------TOE2(1) ->ARR11(3)      ---------->DOF2         ---------->DOF2--------->ANAC58       <-------GAMYB<------ZmHOX2a(1)   tacaagagaaacttgaagagaaagatgagaagatgatgaagagaaaagatacttgagtaagtaatggaggaagaagaagcccgttgtacgaggaggaaga  503600                  ---------->DOF2     <---------ANAC46                                                                               <     ----------->GT1                                                                <---------ANAC46< --------->HSFC1(2)              <------------CBF                                   ----------->GT1-- <---------HSFB2a(1)          ------------>CBF                          <----------DOF2          <--- <---------HSFC1(2)         ----------->GT1         ---------->DOF2    <---------ANAC58        <----- >>>>TBF1  ---------->DOF2---------->DOF2        <---------ANAC55(2)   <---------ANAC58   ---------->DOF2   agaagcgtcgtgaaaaagaagaaagaagaaaagtcaattgggccataagataagtaaagcccaaatagaaatggctttgttttgtttagtataaaagttg  503700                    --------->AHL20(2)                 <---------CCA1(1)          --------->YAB1       --------->YAB1<---------AHL20(2)       <------ZmHOX2a(1)     <---------TOE2(3)     <---------TOE1(3)   --------->ARR11(3) ------MYB46(1)  <---------RVE1(1)                                <------ZmHOX2a(1) ------MYB83    --------->ARR11(3)                 --------->AHL20(2)                        ------>MYB83 ------->MYB59  --------->AHL20(1)                 <---------AHL20(2)        --------->WRKY12------>MYB46(1) ------MYB52(1) <---------AHL20(1)   <---------REM1(1)          <---------TOE2(3)          <---------MYB59 ----MYB46(3)   <---------ARR11(3)--------->ICU4   --------->ATHB51----------->GT1         --------->TOE2(3)   ttaggttaaggataataagatattaaatatgttgtaatgttgtaacagaagaattatttagagattaaggagaaaaacgttgaactggctaaacctaatc  503800               ----------->GT1         ---------->DOF2       ------>ZmHOX2a(2)      <------ZmHOX2a(2)      --------->CCA1(2)     <---------ARR11(3)     >>>>>>>>>GATA-2     --------->ARR11(3)     >>>>>>>>>GATA-1     --------->AGP1                                                         <-----------GT1       ---     >>>>>>>>>GATA-3                                                      <---------WOX13(1)     ----     >>>>>>>>>GATA-4      --------->ETT(2)                         <----------DOF2  ---------->DOF2    --------->GLK1(1)     <---------ETT(2)           --------->ZAT18   <---------YAB1            <---   tctaagagatctaaagagagtaacaatgtagacatacaagactaatctctgtaagtgttctaaatgctgctttgtgattaacaaaacaaagtaaacagag  503900  Previous    Next  AGI:  At4g01180.1    Description:  XH/XS domain-containing protein. similar to XH/XS domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G59390.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21645.1); contains InterPro domain Region of unknown function XH (InterPro:IPR005379); contains InterPro domain Region of unknown function XS (InterPro:IPR005380) Range:  from: 501287    to: 503394    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version