Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                       <---------ZAT14                                                     --------->ZAT14                          >>>>>>>>>WRKY18  <---------DAG2 -------->MYB52(1)        <---------WRKY18(1)    <-----------GT1 -------MYB52(2)         --------->WRKY12  <----------DOF2                    --------->MYB52(1) >TOE1(3)           --------->ANAC46    <-----------GT1         <----------DOF2       --------->ALFIN1 >TOE2(3)         <---------ALFIN1   --------->TOE2(3)--------->ZAT6     --------->AHL20(2)   actaacaattgtttctgcatacaccccttgacttaaaattcttaacttttttttctacactaacttctttaacaattgaataacgagagtgtcgaaattc  476800                                                                                           <---------                                                                                       <-----------GT1                                                       <---------AHL20(1)        --------->ARR11(3)                                                       --------->AHL20(2)        <---------ARR11(3)           --------->AHL20(2)            ------>ZmHOX2a(1)                      <---------CCA1(2) <---------ZAT18                        --------->TOE2(3)                     <---------AHL20(2)  <-- --------->ZAT14                        --------->TOE1(3)             <---------AHL20(2)  <---------DAG2 <---------ZAT14                  --------->AHL20(2)   --------->AHL20(1)     --------->AHL20(2)  --- --------->ZAT18                  <---------AHL20(2)  --------->YAB1  <---------YAB1<----------DOF2   gagtgtacaacattttaaaactgtttttttttgtttttaaatccttaacctcttaaatataatatcaagtgtataattgtttaaatctttaaccttttaa  476900                                                                                                    -                                                                                                  <--                                                                                                  <--                                                                                                  ---                                                                                                  <--                         <---------YAB1                                                         <----             ----------->HVH21                                                                  -----             ----------->TGA1<---------AHL20(2)                                                ------           <---------ANAC55(2)                                                               <-------           --------->ANAC55(2)<---------AHL20(2)                                 --------->ANAC46 <--           <------MYB83  --------->ICU4     ----------->GT1                      --------->ANAC58 <--           <------MYB46(1)   --------->AHL20(2)                              <---------ALFIN1--------    ---------->DOF2    --------->YAB1       <----------ID1                 <---------ALFIN1 --------- -DOF2   --------->CCA1(2)<---------ICU4  ---------->DOF2    <---------RAP2.6(2) --------->ANAC58 <-- -------ARR11(3)<---------ANAC46 <---------ICU4             <---------LBD16----------->RAV1(1) ------ ------>ARR11(3)<---------bZIP60(2) --------->ZAT6       ---------->DOF2--------->ANAC46  <---------At5g28300   gaacttaaaagataggtgacgttgaacataattaaatatcactaaaaagaaaaaatcacaaatgcggctactaatcgccacacactcaacttcaccgctg  477000      <---------RVE1(1)     <---------ARR11(3)     --------->ARR14(2)     <---------ARR14(2)     --------->ARR11(3)     <---------GLK1(2) <-------TEIL -------->ALFIN1 -------ANAC46 -------O2 ------>TGA1a -------TGA1a -----TGA2(2) ->NtERF2 --->WRKY12                                                                           <------MYB83 --At4g35610                                                                          <---------MYB46(3) -------ANAC58                                                               <---------WRKY12 -------bZIP60(2)         <---------ICU4                                     <<<<<<<<<WRKY18 ->At4g35610              --------->ATHB51                           --------->ATHB12 <------MYB46(1) >DEAR3(1)<---------AHL20(2)                                        --------->ICU4   <---------AtMYB61 -------ANAC58         --------->YAB1          ---------->DOF2      <---------YAB1  <--------P ----->HVH21      <---------ATHB12<---------TOE1(2)        <-----------GT1  --------->WRKY18(1)   acgtgcagatttttaatcaaatgaagaataatttcgcacatttcgaagtaaaagggctattttacaaaacatgattaagtcaaggggttggtttgcaaat  477100                                                                                               ------                                                                                              -------                                                                                      --------->ATERF1(1)                                                                                      <------NtERF2                                                                                      <---------LBD16                                                                                     ------>NtERF2                                                                                     <---------ATERF1(1)                                                                                     --------->ABI4(1)                                                                                    <---------ATERF1(2)                                                                                    --------->ATERF1(2)                                                                                    --------->RAP2.3(3)                                                                                    --------->RAP2.3(2)                                                                                    --------->DEAR3(1)                                                                                   --------->ERF1                                                                                   --------->RAP2.3(1)                                                                                   --------->ATERF1(1)                                                                                   --------->DEAR4(2)                                    <---------YAB1                                 --------->ORA47(2)                                 <---------MYB52(1)                               <---------ATERF1(1)                                 --------->ICU4                               --------->YAB1---------                              <------NtERF2                                --------->YAB1----------->HVH21                             ------>NtERF2                              <----------DOF2  <------NtERF2                            <---------DEAR3(1)                         <---------ANAC58 --------->LBD16       ------->GAMYB        <---------ANAC46                 <---------ANAC46<---------YAB1 ---------    ----------->RAV1(1)     --------->DEAR3(1)          <------MYB46(1)<---------ANAC58 ------>NtERF2   --------->ANAC46  ---------->DOF2--------->ICU4  *TSS<------MYB83  ---------->ID1<---------DEAR3(1) <-----------GT1     <---------AHL20(2)            <---------ICU4<----------DOF2 --------->DEAR3(1) -   atttcacaacagaaatgtgccattaaaacggcgtcgttatgattcaggcttaatcagtaggttgtgtcttttggcttttatcatcgccgccgggacacaa  477200                          <---------HSFB2a(2)                          <---------HSFC1(1)    --------->ALFIN1      --------->HSFC1(1) ----->RAV1(1)        <----------DOF2 -->ANAC46           <---------ANAC58    ------>ZmHOX2a(2) >ANAC58    ----------->ARR10      <----------DOF2 >ANAC58 <---------ANAC46 --------->HSFB2a(2)                            <---------GLK1(1) --------->DOF2      <---------ANAC58  --------->ARR11(3)<-----------GT1 --------->GLK1(1)   cacaaagaggggcttagatttgtgctttcgagaagtgctttgatctctcttctccattttcacttctaatcggagatttctcttagggttttgttattcg  477300                                                            <---------ANAC58                                                            <---------ANAC46                                                            ----------->GT1                                                            <---------ANAC58                                                          <---------ANAC46                                                       <---------ANAC46                                                       --------->ALFIN1                        <-----                                                       <---------ANAC58                        <-----                                                     <------MYB83 <---------ZAT14              ------                                                     <------MYB46(1)                           ------                                                    <---------AtMYB61                 --------->TOE2(3)                                        --------->YAB1 <---------ANAC58              ----------->RAV1(2)                           --------->GLK1(1)     <-----------RAV1(1)                ------->TEIL  ---           --------->AHL20(2)           ------>ZmHOX2a(2)--------->ALFIN1    --------->LBD16  <------     <------ZmHOX2a(2)     <---------GLK1(1)     <---------MYB46(3)        <---------LBD16    <------   ttgagagatcgaattaaaaacttgtgaagaaatctctagggatcgtaatcgttgttggtgtggggtattacactgattccggtttgaacctgaatcgtat  477400                                                                     --------->LBD16                                                                    <---------ANAC58                                                         ------>ZmHOX2a(2)                                                         =======================HOX2a_HOX2a                                                         ====================================HOX2a_HOX2a                                                        <------ZmHOX2a(2)                                                        =====================================HOX2a_HOX2a                                                        ========================HOX2a_HOX2a                                                      ------->GAMYB <---------ANAC58                                                   <---------DOF5.7(2)<------NtERF2    <---------ATHB12                              <---------WRKY12  <---------ANAC46  --------->WOX13(1)      ---------->DOF2  --------->ZAT2----------->GT1 ----ARR11(1)        ----------->GT1       <---------ZAT2--------->YAB1 ----ARR14(2)       <XXXXXXXXXXXXXXXXXXXXMIR4239<-----------HVH21  <---------LBD16 ->TEIL       <-----------RAV1(2)          --------->At4g35610   <-----------RAV1(1)               -- --->ARR14(2)--------->At4g35610           <---------At4g35610--------->ARR14(2)           ---------- ------>WOX13(1)   <------ZmHOX2a(1)    --------->At4g35610   <---------ARR14(2)          <---------WRKY38(1) ---ARR14(1) <---------At4g35610        <---------At4g35610  <---------CCA1(2)        <------ZmHOX2a(1) ---CCA1(2)<---------bZIP60(1)      --------->GLK1(2)--------->MYB46(3)  <------ZmHOX2a(1)<---------WRKY45   ctatcaatcgatggcatcagaggatgtgaaaagaacagaatcagcagctgtgtcaacgatcgtaaatctggcggaggaagcgagggaaggagtcaaagct  477500                                                 <---------ANAC46                                            <-----------RAV1(1)                                            <---------bZIP60(1)                                            <---------REM1(1)                                            --------->ALFIN1                                            --------->bZIP60(1)                                          <---------MYB46(3)                                          --------->ABI4(2)                                         <---------DEAR3(1)                                         <---------AtMYB61                                         --------->ALFIN1                                        <---------MYB52(1)                                       --------->LBD16  <---------ANAC58                   <---------At4g35610--------->ATERF1(2)          <----------DOF2             ---------->DOF2          <---------DREB2C(2) <---------ZAT6        <----------DOF2               <---------DEAR3(1)<---------ANAC46        --------------->AGL15  <----------DOF2<------NtERF2        <---------DAG2                 <--     <---------YAB1--------->At4g35610<---------ATERF1(2) --------->ALFIN1                        --- ------->LBD16    --------->GLK1(2)  <---------LBD16    <---------ANAC58<-----------GT1          ---- >DOF2  <---------------AGL15  <---------DAG2<-----------HVH21     ------>ZmHOX2a(1)       <---------   ccgagttatgcttttaaaagcatctgcaagtctctttttgccggtggtgtcgctggtggagtgtgagtcctttttctcattccttcattgttttatcaat  477600     <---------YAB1                      <---------YAB1     ------->TEIL                      --------->YAB1 <---------TOE2(3)               ------>ZmHOX2a(1)                             --------->ICU4 -------AHL20(2)                 --------->LBD16                           --------->TOE2(3) ------>AHL20(2)               <---------LBD16                            --------->ANAC58 ----->YAB1                    ----------->RAV1(2)                        --------->ANAC58   <------- --GT1             <-----------GT1    --------->ICU4                      ----------->GT1    --------   tttaatgaatattgggattagtaacgagacatctcctgaaatgatgagtagggactgactatacatttgtttgagaacgtcaaaattagatttaagaact  477700  Previous    Next  AGI:  At4g01100.1    Description:  mitochondrial substrate carrier family protein. similar to mitochondrial substrate carrier family protein [Arabidopsis thaliana] (TAIR:AT5G51050.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39727.1); contains InterPro domain Adenine nucleotide translocator 1; (InterPro:IPR002113); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993); contains InterPro domain Mitochondrial carrier protein; (InterPro:IPR002067) Range:  from: 477152    to: 479936    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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