Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                  -----                                                                                                -----                                         ----------->GT1                                        <----                                     <-----------------------TaNAC69(2)                 --------->HSFC1(2)                                     <-------TEIL                     <-----------GT1   <---------HSFC1(2)                                --------->AHL20(2)             --------->TOE2(3)        <---------HSFB2a(1)                            <---------AHL20(2)                 --------->TOE1(3)     ---------->DOF2                            --------->AHL20(2)              <-----------GT1        ------>ZmHOX2a(2) --->TEIL                  --------->AHL20(2)           <----------DOF2        <---------YAB1   <----   aactacaaaaatgaaatcacaaatagacatttaatcaaatacatggtaaacacaaacactttaaaccctaaattacaagttttgatcgaaagcttcgaaa  467900                                    --------------->AGL15                         --------->ATHB12                         --------->ATHB51                         --------->YAB1                         <--------ATHB1                         -------->ATHB1              --------->HSFB2a(2)                        <---------YAB1               <---------HSFB2a(2)                        <---------ATHB12          --------->GLK1(2)                      --------->YAB1<---------------AGL15                      --------->WOX13(1)         --------->ARR14(2)                     --------->MYB46(3)          <---------ARR14(2)                   ------>MYB83    ==================================================================                   ----------->RAV1(1)           --------->ARR11(3)                   ------>MYB46(1) ----------------->AGL3              =========================HOX2a_HOX2a                 --------->MYB46(3)<-----------------AGL3              <------ZmHOX2a(2)                 ------->GAMYB     <-----------------AGL1   <----------DOF2                --------->ANAC46   <-----------------AGL2<---------ARR11(1)               -------->P<------------ATHB5      <---------ARR11(3)   --------->ARR11(3)               ------>MYB83        ----------------->AG <---------CCA1(2)           --------->ANAC46        <-----------------AG <---------ARR14(1)         <-----------GT1--------->ICU4 --------->ARR14(2)------->TEIL <---------ARR11(3)        -----       --------->AHL20(2)<---------ICU4<---------ARR14(2)<---------ARR14(2)                    ------ ---->HSFC1(2)------>MYB46(1)      ----------------->AGL1--------->ARR14(2)                   ------- ---->HSFB2a(1)------>MYB46(1)     ----------------->AGL2--------->GLK1(2)                    <------ -----HSFC1(2)------>MYB83     ------->TEIL      <---------GLK1(2)---------->DOF2          <---------WRKY12 -----HSFB2a(1)>>>>>>>>>MYB98 <---------GLK1(2)----------->ARR10<---------YAB1           <------ZmHOX2a(1)   tttccaaaattaaacccaacccaacaatcattgaatctccatatttggaaagattctcgaatctttatcaaagatcaaattcgaaattgaaggacaacga  468000                                   <---------RAP2.6(2)                        --------->LBD16                       --------->LBD16                      <---------LBD16                      --------->HSFB2a(2)                      <---------HSFB2a(2)                     <---------LBD16                   <---------ARR14(2)         <---------ANAC46                   --------->ARR14(2)    --------->ICU4                                             <               <-----------------AGL1    <-----------RAV1(1)                                        =   ---------->DOF2<---------MYB52(1)--------->LBD16                                                 - ================================MADS_MADS   <---------LBD16                                        - ---->MYB52(1) ----------------->AG<---------ANAC46                       <---------At4g35610       < ->GAMYB       ----------------->AGL1<------NtERF2             <------NtERF2             --------->ANAC58 -->MYB46(3)  <---------At5g28300 <---------LBD16            <---------DEAR3(1)          --------->ANAC58 ---MYB52(2) <-----------GT1      --------->RAP2.6(3)      --------->CCA1(2)--------->ICU4       <---   actgcgaaagaaagattaccgtttccgggagaagattgcggcaatgttgggggaattggagagacggcgagactggagatgatgaaatagtaagcaagag  468100                                           <------NtERF2                                         <---------DEAR3(1)                                         <---------ANAC46                                         <---------DREB2C(2)                                  <-------TEIL                               <---------HSFB2a(1)   <-----------RAV1(2)         >>>>>>>>>TBF1  <----                               --------->HSFB2a(1)  --------->ZAT14           >>>>>>>>>TBF1 --------- ---------O2  <---------TOE2(3)--------->HSFC1(2)   <---------ZAT18        >>>>>>>>>TBF1  >>>>>>>>>TBF1 ======================bZIP_DOF<---------HSFC1(2)   <---------ZAT14     >>>>>>>>>TBF1  >>>>>>>>>TBF1 -------->O2--------->MYB52(1)<---------TOE2(2) <---------ICU4         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) -------->TGA1a           <---------TOE2(3)--------->At5g28300       >>>>>>>>>TBF1  >>>>>>>>>TBF1 ---------TGA1a      --------->GLK1(2)<---------DEAR3(1)<------ZmHOX2a(1) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) -------ID1 ---------->DOF2   <---------TOE1(2)<---------YAB1       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)   cgacgagagagaagtaaaggaagaatttgacgaaggttcgatggcggtgatcagtgcaggagggaacagaagaagaagaagaagaagaagaagaagaagc  468200                                                                                                <----                                                                                                <----                                                                                                <----                                                          --------->MYB52(2)                  *TSS                              <----------DOF2         ----------->GT1                   --------->At5g28300                             <---------DAG2          <---------TOE2(3)                 ----------->GT1                             <----------DOF2         <---------TOE1(3)               --------->ZAT14                            <------NtERF2  --------->ANAC58                          <---------ZAT14                           ------>NtERF2   --------->ANAC58                          --------->ZAT18                          <---------RAP2.6(2)    --------->YAB1                    --------->ZAT14 -----RAP2.6(2)     <---------ARR14(2)     --------->ANAC46                        --------->ZAT18 ->DOF2 <---------TOE2(3)---------->ID1   --------->WOX13(1)                       <---------ZAT14   ggcttcttcaaaggtttctacatatttggcgccttttgggctatcaagcaatactaaggttaattgttgttccattgaagaagagagcacagtgaatttg  468300                                                                         <----------DOF2                                                                       <------ZmHOX2a(2)                                                                      <-----------ARR10                              <---------O2             <---------TOE2(3)------>ZmHOX2a(2)                    <---------YAB1               <------MYB83         --------->ARR14(2)                 <---------AHL20(2)              <------MYB46(1)      --------->ARR11(3)                --------->AHL20(2)              --------->MYB59       <---------ARR14(2)                <-----------TBP                 <---------AtMYB61     <---------ARR11(3)             --------->YAB1   --------->O2  <---------MYB46(3)       <------ZmHOX2a(1)             <--------ATHB1   <---------TGA1a <---------MYB52(1)   <---------TOE2(3) ---------->DOF2 --MYB46(1) <---------ATHB12  =======================MYC_MYB   <----------DOF2  <xxxxxxxxxxxxxxxxxxxx --MYB83------------>CBF      ============================================bZIP_DOF <---------YAB1 -----ANAC46--------->ICU4    --------->TGA1a<-------GAMYB  <-----------GT1  ----------->HVH21      <   gtggaagctattcaatgattttatagttggactcgtgagaatgagatggttaggtttgagattaacttttaggatctttgtgaccatgaaagtgatgttt  468400                                   --------->YAB1                                   <---------ICU4                                   <--------ATHB1                                   <---------AHL20(1)                                   <---------AHL20(2)                    <---------ZAT14<---------YAB1                                   --------->AHL20(2)                    --------->ZAT14--------->AHL20(2)                                  <---------YAB1                      <---------At5g28300                                  --------->ICU4                     <---------ICU4     --------->AHL20(1)             <----------DOF2    --------->YAB1                       <-----------GT1    <---------AHL20(2)          <-----------GT1      --------->ICU4                     <---------ICU4 ----------->GT1     <----------DOF2        <------ZmHOX2a(1)                    <---------AHL20(2)    <---------AHL20(2)     <---------DAG2 <---------AHL20(2)                           --------->AHL20(2)    --------->AHL20(2) xxxsmallRNA(se3)  <---------AHL20(2)                         <---------AHL20(2)--------->DAG2 -----------GT1    --------->AHL20(2)   ----------->GT1      --------->AHL20(2)---------->DOF2   tgttacccttttttacttttattaaatgcaggaataataattttgtgaatttcagacagtctatttattaattactgcagaaaaagtaattttattgata  468500         ---------->ID1   <---------AHL20(1)   --------->AHL20(1)                                                                  ----------->GT1   --------->ARR11(3)                                                                  --------->YAB1 <---------ARR11(3)               --------->At5g28300     ----------->HVH21   <---------ZAT6    ----- --------->AHL20(1)              ----------->GT1     ------->TEIL    <---------AHL20(2)<---------ICU4 <---------AHL20(1)             --------->ZAT6    <---------YAB1  ----------->GT1     <---------ATHB12   caaaatattttgtctcaatagaaacatatttgtaacagtaaaaactattgtcatgaatttgtgacaagtagtaaattgtagtgatacaatcgttacaaaa  468600                                            <---------AHL20(2)                                        <---------AHL20(2)                                       --------->AHL20(2)                                       <---------AHL20(2)                  ---------->DOF2                   >>>>>>>>>>>>>>>>>LFY<---------ARR11(3)                --------->ANAC58                  --------->ANAC58     --------->AHL20(1)                --------->ANAC58                  --------->ANAC58     <---------AHL20(1)            ------->GAMYB                 <-            --------->DAG2       <-----------GT1                    <----------ID1            -------           ---------->DOF2    --------->ARR11(3)               --------->ANAC46              --------         <---------AHL20(2)   <---------ARR11(3)               --------->ANAC58              --------   ----------->GT1--------->ANAC46     --------->ARR11(3)      --------->ANAC58   --------->YAB1  --- ---->AHL20(2)<-----------HVH21--------->CCA1(2)  <---------YAB1  --------->MYB52(1)         --------   aaatatggtattaaaaagtcacaccattgtgagatatacaatatatttgattacaattttgtcacaaacaacgacaagaaagaagaataacaaaaccgta  468700       <---------ARR14(2)       <---------GLK1(2)                    <-----------GT1                  --------->AHL20(1)       --------->ARR14(2)                 <---------AHL20(2)      <---------AHL20(2) --------ICU4                           <---------AHL20(2)      <---------------AGL15 -->At5g28300                        --------->AHL20(1)        <-----------------AG --->GT1                             <---------AHL20(2)      <---------AHL20(2) ->TOE1(3)                           <---------AHL20(1)  <---------AHL20(2)  <---------ARR11(3) ------>ICU4                   --------->YAB1        <----------DOF2         <---------AHL20(1) ->TOE2(3)     --------->YAB1<-----------HVH21--------------->AtSPL8         --------->ARR11(3)<-----   acaattacagatttgaattatactttcgaactgtcatattatattttttctgttcctttttatttgatttttttggaaaaatatttgttttaaaaagatt  468800  Previous    Next  AGI:  At4g01080.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G01430.1); similar to unknown protein Cr17 [Brassica napus] (GB:AAX51387.1); contains InterPro domain Protein of unknown function DUF231, plant (InterPro:IPR004253) Range:  from: 466391    to: 468294    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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