Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         --------->DAG2                   --------->AHL20(2)      ---------->DOF2                   <---------AHL20(2)    <---------AHL20(2)              --------->AHL20(2)    --------->AHL20(2)              <---------AHL20(2)    --------->YAB1                 --------->AHL20(2) ---->ZmHOX2a(2)                   <---------AHL20(2) ------AGP1                    --------->AHL20(2) ------ARR11(3)              ----------->GT1                                --------->AtLEC2 ------ARR14(2)              <---------ANAC55(2)                            --------->ANAC46 ----->ARR14(2)         --------->AHL20(2)                               <-------TEIL               < ----->ARR11(3)        <---------AHL20(2)                      --------->DAG2                     <-- -->ALFIN1             --------->AHL20(2)                     ---------->DOF2                     ---   atctaataaaaagtagcacatacaaataaataagtaaattaataaaacttattgagagaacataaaaagttgaagtccatgaaacaaaaactatagagaa  404400                                                           ------>ZmHOX2a(2)                                                          --------->CCA1(2)                                                          <------ZmHOX2a(2)                                                         <---------ARR11(3)                                                         --------->ARR11(3)                                                         --------->ARR14(2)                                                         <---------ARR14(2)                                                         <---------AGP1                                                         --------->AGP1                                                        --------->RVE1(1)                                                       ----------->ARR10       --------->ANAC46                           --------->ANAC58                         <---------TOE2(3) <---------------AGL15                            --------->ANAC58                <-----------GT1 -----------------AGL3                         <---------ATHB12                <---------ICU4 -------ARR11(3)                    --------->GLK1(2)---------->DOF2           --------->YAB1 ------>ARR11(3)            --------->CCA1(2)--------->WOX13(1)     --------->ALFIN1 <----------DOF2   tatctatacatggaactatatatgtataagataagaagaatctagattaatcaagaaaagatctgagagagtgggaacaaataatcactttctaacgtat  404500                                              --------->ANAC58                              <------ZmHOX2a(1)                     --------->DAG2           --------->ANAC58        <----------ID1                 <---------AHL20(2)         ---------->DOF2         <---------------AtSPL8                 --------->YAB1       ------>ZmHOX2a(2)          ---------->DOF2                 --------->AHL20(2) <---------ARR11(3)       ---------->DOF2               ----------           ----------->GT1    ===============HOX2a_HOX2a <----------DOF2                  --------->AHL20(2) ------>ZmHOX2a(2) ---------->DOF2  --------->ARR11(3)--------->ARR11(3)                  <---------AHL20(2) ====================================HOX2a_HOX2a      <---------ARR11(3)          ---------->DOF2   ggatcgagcaagagagtaataaaaaggtattaggagttgatctctaaaaagccagacatcttttaaagaaagggaacaaaatttcaaagaaattaaagac  404600                                                                          --------->AHL20(2)                                                                          <---------AHL20(2)                                                                  ---------->DOF2     ----------->GT1                   --------->TOE2(3)      --------->ANAC58                  -----    --------->DAG2       ---------->DOF2                      --------->ANAC58                -------   ---------->DOF2  ---------->DOF2    --------->TOE1(3)     --------->DAG2             ---------->DOF2 >DOF2         ---------->DOF2---------->DOF2               ---------->DOF2        ---------->DOF2   cattgaaaagtaaaaacaaaagaaaagaaaagaaaagaaaaccctaataaacacaaaaaccaaaaagcaaaagaaatttataagaaaaagaaaagagaaa  404700     <---------HSFB2a(2)                                               <---------ANAC46     --------->HSFB2a(2)       --------->DAG2                ---------->DOF2                    <---- ------>GT1                   ---------->DOF2   ----------->HVH21 --------->At4g35610           ----- --->DOF2             --------->CCA1(2)       --------->At4g35610 --------->CCA1(2)             -----   gtaatttgcagaagaaacaaggagataagagaaaaagggaagaagatgaactgacctgatgttcaaagagatgacttagagagagacagagagaagaata  404800                                  <---------------AGL15                                  --------------->AGL15                                  <---------DAG2                                  <----------DOF2                                  ===================================================================                          <------MYB46(1)                          <------MYB83          *TSS            <---------ANAC58                                   <---------AHL20(2)    <-       ---------->DOF2    <---------ANAC58                         <-----------GT1     <----------DOF2  <---------TOE2(3)     <---------ANAC46                 --------->ALFIN1    --------->AHL20(2)    <- -----AHL20(1)        <-------GAMYB                    <---------ANAC58   <----------DOF2   --------- ---->AHL20(1)       <-----------RAV1(1)               <---------ANAC46--------->ARR11(3)   <-------- ---->ARR11(3)       --------->ALFIN1                  <---------ANAC58<---------ARR11(3)  --------->TOE2(3)   ttttgaggctaaagtttagaagtgtgttgggtttcacttttatgggcatttttagtggtgtgtttgttttgactatcttttaattctctcttttcttaat  404900                          <---------ICU4                          --------->YAB1                       --------->YAB1                    <---------ICU4      ----------->GT1  <---------ICU4      <---------MYB46(3) <---------YAB1   <------MYB83  <---------ICU4   <------MYB46(1)  --------->YAB1  <---------AtMYB61<---------YAB1  --------->MYB111(1) <---------YAB1 <--------P <-----------GT1                                                                      <--- =======MADS_MADS--------->YAB1                                                                 <---- --------ZAT6    XXXXXXXXXXXXXXXXXXXX>MIR414                                                 <------- --------REM1(1)<---------YAB1                        <-----------GT1      <---------YAB1   --------- ------>AGL15 --------->YAB1                <---------MYB46(3)      --------->YAB1        --------->YAB1 -------AGL15<---------YAB1              --------->YAB1            <-------TEIL          --------->AHL20(2)   agtgtaggtggttttatcatcatcatcatcatcaccataactatagtagttgatatttagcatactatattcatattttcattcgaggcaaataaaaatt  405000                                                     --------->ARR11(3)                                                --------->AHL20(2)                                                <---------AHL20(2)                                 --------->ANAC58    <---------ARR11(3)                                 --------->ANAC46   --------->CCA1(1)  <---------ZAT14     ------>MYB83             --------->AHL20(2)  --------->ZAT14     --------->MYB52(1)   --------->AHL20(1) ------At5g28300      ------>MYB46(1)      --------->AHL20(2) -------GT1         <---------MYB59        <---------AHL20(2)           ------->TEIL <---------AHL20(2) --ICU4             <---------MYB46(2)    --------->AHL20(2)  ----------->GT1      <----------DOF2  < >ICU4        --------->YAB1     --------->ANAC58   --------->RVE1(1)<---------ATHB12--------->AHL20(2)   acagtatacaatacaactataacctaactagaaacacgataaaaaaaaattaaaatatctaatattgtcaaatgaatcaaacgacctttaatttcaaatt  405100                ----------->GT1               <---------TOE1(3)     --------->AHL20(2)               --------->At5g28300               <---------TOE2(3) ---------->DOF2                     ----------->GT1                -         ----------->GT1    --------->ATHB12                     --------->ETT(2)                <---     ---------->DOF2       <---------YAB1                       --------->HSFB2a(2)       -----------    <---------AHL20(2)   --------->TOE2(3)  ----------->GT1     <---------HSFB2a(2)      <---------TOE2(3) ---------ZAT6---------->DOF2 <---------WOX13(1)          --------->ICU4               ---------->DOF2   tagtattaaaagtgtttaaagttaaaaccttgattgaaagaaaatatagttaatcttgtaatgtttctcgacagtaaataagtctatattaaaggaaaat  405200                                                                                                   <-                                                                                             <-------                                                                                           --------->DOF5.7(2)                                                                                           <---------MYB52(1)                                                                                          --------->TOE1(3)                                                                                          --------->TOE2(3)               --------->ANAC55(2)    <-----------------AGL3                            <---------TOE1(3)    <---------YAB1       <------ZmHOX2a(2)                 <-----------GT1              <---------TOE2(3) -------->TOE2(3)       <---------ARR11(3)         --------->LBD16                     <---------DOF5.7(2) --------GT1 <-----------GT1       ------->GAMYB   <------NtERF2                   <---------YAB1  <- >GT1  <----------DOF2  --------->ARR11(3)       <---------LBD16                 ----------->GT1   <-   tacattattctttttttacgagattagatcatatcaacgagcttaaaatgggccggatgtttaacttagcccaaactttgaaattgtgataacgttaact  405300  Previous    Next  AGI:  At4g00940.1    Description:  Dof-type zinc finger domain-containing protein. Identical to Dof zinc finger protein DOF4.1 (DOF4.1) [Arabidopsis Thaliana] (GB:Q9M161;GB:O23083); similar to DAG1 (DOF AFFECTING GERMINATION 1) [Arabidopsis thaliana] (TAIR:AT3G61850.3); similar to DAG1 (DOF AFFECTING GERMINATION 1), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G61850.1); similar to DAG1 (DOF AFFECTING GERMINATION 1), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G61850.2); similar to Dof17 [Glycine max] (GB:ABI16018.1); contains InterPro domain Zinc finger, Dof-type; (InterPro:IPR003851) Range:  from: 403320    to: 404810    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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