Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                               --------->At4g35610       <---------TOE1(2)                                                    <---------SPL7                     --------->SPL7      <---------ALFIN1                         ------>NtERF2 <---------At4g35610     --------->TOE1(2)    ----------->RAV1(1)                   ------->TEIL      --------->GLK1(2)        <---------SPL7 --------->PCF5                        <---------YAB1<---------MYB52(1) --------->ANAC58 ------>ALFIN1                    <----------DOF2  <---------MYB46(3)   --------->ANAC46 ----MYC3                     <-----------GT1 <---------ANAC58          --------->ANAC58            - --->MYC3  <---------YAB1  --------->MYB52(2) <---------ANAC58          --------->AtLEC2       ------   gtggtccaacactctcatagacaaatcgatagtttccttttatgaatgccgagtcgttcgctaatctgacttacatgcaatacaactcgtacgagctaag  393400        ----------->HVH21       <-----------HVH21                          ---------->DOF2    --------->TOE2(3)      <---------ANAC58                         <---------------AGL15 --------->TOE1(3)      --------->O2    <---------ARR14(2)       =======================================MADS_MADS      --------->ANAC46<---------ARR11(1)      --------->TOE2(3)      --------------->AGL15      <---------ANAC55(2)                  --------->KAN4(2)         <---------------AGL15      <---------O2    --------->ARR11(3)  <---------GLK1(1)         ----------------->AGL1      --------->ANAC55(2)  <----------DOF2<----------TaMYB80        ----------------->AG      <---------ANAC58<---------ARR11(3)  --------->GLK1(1)         <-----------------AGL1     <-----------------------TaNAC69(2)   <---------KAN4(1)        ------>MYB46(1)              ----- <-----------GT1      --------->ARR14(2)  --------->KAN4(1)        ------>MYB83                 <---- <---------ICU4      <---------GLK1(1)   --------->ARR14(2)        -------->P                   <---- -------->ICU4       <---------CCA1(2)   <---------ARR14(2)      <---------MYB59               ------ ----->GT1        <-------TEIL    <-----------RAV1(2)        --------->MYB59<----------ID1-----------   taataactacgtgacaccgatgcatatctctttgggccagtcggatattcttaaaagggcgattaggcctaccttaataggccaaacaagtccaacagtg  393500                   <---------AtMYB61              <---------ANAC46              <---------ANAC58              <---------ANAC55(1)         --------->ANAC55(2)         <---------ANAC58         <---------ANAC55(2)<---------AHL20(2)       <-----------GT1      --------->AHL20(1)   --------->AHL20(2)       <---------AHL20(1)   <---------AHL20(2)      --------->YAB1 ---->ZAT14   --------->ANAC55(2) -----ZAT14   <---------ANAC55(2)      <---------CCA1(2) -----ZAT18   <---------ANAC58    <-----------GT1             <---------YAB1                      --- --->ALFIN1<---------MYB52(1)<---------YAB1              --------->ZAT6                    <---------ZAT6 >RAV1(1)<---------ANAC58  --------->AHL20(2)         ----------->HVH21 <----------DOF2<---------AHL20(2)   caggtttaattacgttacgttttggtctattatatttatccaaatctctaatctatatgacactataatttgggctttattaggcctatttaagtgttac  393600                                    <---------AtLEC2                            ------------>CBF                          --------->bZIP60(1)         <---------ZAT14  --------->O2              <---------STY1(2)         --------->ZAT14  <---------bZIP60(1)       --------->STY1(2)    <---------ZAT14       --------->bZIP60(2) <---------ZAT18    --------->ZAT18       <---------O2        <---------ZAT14                              <---------ANAC58    <---------ZAT18      <-----------STF1     --------->ZAT14          ---------->DOF2     <---------ANAC58    --------->ZAT14  <---------DOF5.7(2)      --------->ZAT18      --------->ZAT6          <---------ANAC46 ------>YAB1       --------->DOF5.7(2)  --------->YAB1       <---------TOE2(3)          <---------MYB52(1)   taatagtccactatgctgttcgtgaacgacgtcaatttgcattaatagtccactagctagacaaaggtttcactaaagaagccctaaaccgtttcgtttt  393700                                                                                                    -                                                                                                  <--                                                                                                 ----                                                                                                 ----                                                                                                -----                                                                                                <----                                                                                                -----                                                                                                <----                                                                                               <-----                                                                                               ------                                                                                               <-----                                                                                               ------                                                                                               <-----                                                                                              -------                                                                                            ---------                                      ------------>CBF                                   --------->MYB52(1)                                   <----------DOF2                                      <---------ALFIN1   <---------ARR11(3)          <---------CCA1(2)                          --------->ANAC46<---------LBD16   --------->ARR11(3)          ---------->ID1                 --------->MYB52(1)       ------>ZmHOX2a(1)   cccaagaacttcttgttcatcttcttcgcgctcgtctctttccaattccagtcttgtttcgaagtaatggctactcgcgaaacaaattcctcaccggaga  393800        --------------------->WRI1        <----------DOF2    <---------ANAC46    <---------ANAC58    <---------ANAC58   ------>NtERF2 -------->At4g35610 -----TEIL ----->CCA1(2)              <---------ALFIN1 ----->ARR14(1)          --------->ANAC46 ---->ARR14(2)         --------->TOE2(3) -----ARR14(2)       -------->P ---->ARR11(1)       ------>MYB46(1) -----GLK1(2)        ------>MYB83 ----GLK1(1)         =====================MYC_MYB --->GLK1(1)<---------HSFB2a(2)   ----------->RAV1(2) -----TaMYB80      --------->AtMYB61                                      xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) --->HSFB2a(1)    <---------MYB52(2)    <---------ANAC58                 <----------DOF2 ----HSFB2a(1)    --------->MYB46(3)    <---------ANAC58    --------->ARR11(3)               <------- ---->ARR10 --------->HSFB2a(2) --------->TGA1a             <---------ARR11(3)            --------->YAB1 >LBD16 ==================================bZIP_DOF      <---------At4g35610  ---------->DOF2 <-------   ttcgctgcgtctttgtagaaaccaacctcgacactcgtctgggcgttctcatggagagagatgatattgtttctactttcaaaggtgactcttcataatc  393900                                                    <---------AHL20(2)                                                <---------MYB46(3)      ---------->DOF2                                              <---------ANAC58    <---------ARR14(2)           <-----                                              <-------GAMYB       --------->GLK1(2)   ------->MYC3 <---------MYB52(1)        <----------DOF2    <---------ANAC58    <---------ARR11(3)  <-------MYC3 --GLK1(2)          <-------TEIL             <---------MYB46(3)   --------->ARR11(3) <---------ANAC55(1) --ICU4      <-----------GT1            <----------DOF2           --------->ARR14(2) --------->ANAC55(2)   tctgttttttttttttttcagtttcatttcttttctaagtttctttttggttgtttatttacagagaaaatctgtaaagagcatgaaacgtgtttcccaa  394000                                                                   <---------ANAC58                                                                 <-----------GT1                            ----------->GT1            ------>MYB46(1) <---------ANAC58 --------->HSFB2a(2)       <---------TOE1(3)           ------>MYB83<---------ANAC58        ---------- <---------HSFB2a(2)       <---------TOE2(3)         --------->MYB46(3)<---------ANAC58<----------DOF2 ----TOE1(2)          <----------DOF2       <<<<<<<<<TBF1----------->HVH21         --------->MYB46(3)   gttttggaaacatcactatctccgctttgaaggtaacaatgttttcttcttcatacccactgacatttttcttgcttaagaaacaacaactttgtttttt  394100                                                                           ---------->DOF2                                                                        --------->ANAC58                                <---------YAB1                          --------->ANAC46                              <-----------GT1                           --------->ANAC58                             <---------AHL20(2)                  <----------DOF2                     <---------MYB46(3)  <---------ZAT18         <---------GLK1(1)                    <---------AtMYB61    --------->WRKY12        --------->GLK1(1)                 --------->ALFIN1        --------->WRKY38(1) --------->ANAC58               <-----------RAV1(1)     <---------At4g35610   --------->ANAC58 >ID1   ----------->GT1     --------->AHL20(2)               --------->ANAC46                       -   tttgttttataggttaaatgtggtggtcaattttatcatttagttgactctctcattttgaacacggctttcccaagcaaagaaacgtttctagttgtcg  394200                                         --------->HSFC1(2)              <------ZmHOX2a(1)          <---------HSFB2a(1)            <---------ANAC46     <---------LBD16                 <---------ANAC58         --------->ALFIN1     ----------->HVH21         --------->TOE1(3)                        <---        <-------GAMYB       --------->At4g35610  <-----------HVH21                               ----  <----------CDC5         --------->ARR11(3)   <---------MYB52(1)<---------ANAC58            -------- <---------At4g35610     <---------At4g35610  <-------GAMYB    <-----------GT1              <------ZmHOX2a(1) --------->At4g35610    ----------->ARR10<---------HSFC1(2)    <---------AHL20(2)         <---------TOE2(3) -------->ALFIN1    ----------->GT1--------->LBD16      --------->TOE2(3)                 <---------TOE1(3)   atgtgctgagggttgaggagaagggtaagatgctgaccggagaaactccgttgtcaaaccctaatttacttgagagagagaccaagactattaaggatgt  394300  Previous    Next  AGI:  At4g00920.1    Description:  COP1-interacting protein-related. similar to COP1-interacting protein-related [Arabidopsis thaliana] (TAIR:AT2G02770.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42460.1) Range:  from: 393767    to: 395382    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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