Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                              <---------AtLEC2                                                     <-----------RAV1(1)   <---------At4g35610                               ------>ZmHOX2a(1)         <-------TEIL   <---------ZAT2                                  ----------->RAV1(2)     <-------TEIL ----->ZmHOX2a(2)                           <-----------RAV1(1)      <-------TEIL -----ZAT6         <---------ALFIN1         ===================RAV  --------->CCA1(2)   gatccagctaatatagttgccacaactctgtttacacatttgcagaatgttgctcctgttgtacatggagatacatatacatacatgtcaatttcgctaa  390900                                                 ------>MYB46(1)                                                 ------>MYB83                                                ----------->RAV1(1)                                              <-----------------AGL1                                          <---------ANAC58                       --------->ATHB12                                          --------->ANAC46                      <---------YAB1                                          <---------ANAC58                      --------->ICU4    ---                                          --------->ANAC55(2)                 --------->YAB1      <--                                          <---------ANAC55(2)              ------->GAMYB         ----                      <-----------------AGL2 ------->TEIL                --------->ZAT14----------->RAV1(1)        ---------->DOF2                  --------------->AtSPL3         ----------->RAV1(1)      <---     >>>>>>>>>TBF1  --------->GLK1(2)    --------------->AtSPL8      --------->AtMYB61 <---------ZAT18   ctaagaagaagaaagttgcaaaattctgaaaatgggttttgtttacgtaccaacattggactcgaagacgaccacaacagtcatgatagcccacatagca  391000                                                                                                   --                                                                                                =====                                                                                                <----                                                                                                =====             --------->YAB1                                                                    <-----       <---------ALFIN1                                                                      <------NtERF2     ----------->RAV1(1)           ---------->DOF2                               ------->TEIL--------  ------>ZmHOX2a(1)               --------->AHL20(2)                            <-----------GT1------ ------>ARR14(2)            --------->ANAC55(2)                              --------------->AtSPL8<- -------ARR14(2)      --------->ARR11(3)                         ------>ZmHOX2a(1)         <---------LBD16 ----->GLK1(1)        <---------ARR11(3)         <---------TOE2(3)  <---------DAG2    <----------DOF2 ------GLK1(1)    ---------->DOF2 <---------AHL20(2)---------->DOF2 <----------DOF2<---------ALFIN1--   tttcctccaacaccatcatacaaaggtctcatgtaataaaagattgagactaatgaaagtgcaagtcctactttaagacaatgtaccactttggccggat  391100                                                                                          <----------DOF2                                                                                          ------>ZmHOX2a(1)                                                                                        ------>ZmHOX2a(2)                                                                                       ==============            ------>ZmHOX2a(1)                                                          <------ZmHOX2a(2)         <---------ATHB12                                                             <---------GLK1(2)        <---------ARR14(2)                                                            <---------ARR11(3)      <---------ALFIN1                                                 =======================HOX2a_HOX2a --------->RAV1(2)                                <---------ARR11(3)   ========================HOX2a_HOX2a ==============================HOX2a_HOX2a       --------->YAB1        <----------DOF2--------->ARR14(2) --ZmHOX2a(2)                             --------->At4g35610          ------>ZmHOX2a(1)============= ==================HOX2a_HOX2a          --------->MYB46(3)         <---------ARR14(2) <---------ARR14(2) ----ARR14(2)                         --------->MYB52(1)           --------->ARR14(2) --------->ARR11(3) ->LBD16--------->ARR14(2)            -------->P <---------ICU4   ------>MYB46(1)   ----------->ARR10 --->ARR14(2)                      --------->At4g35610            ------>MYB83---------->DOF2 --------At4g35610      ------>ZmHOX2a(1)--------->ANAC46       <---------MYB59   ---------->DOF2 ------->At4g35610 <----------DOF2 <---------At4g35610    <---------ICU4<---------MYB52(1)===========   catctgccccaatcctccaagctttcctcataaacttagctacccgctccatgatcaccttcattaccaaatcctttagccaaagaaagatccttttact  391200                 ------>MYB46(1)                 ------>MYB83              --------->MYB46(3)           <------ZmHOX2a(1)                                                                       <-        <---------HSFB2a(2)                                                                     -----      <------ZmHOX2a(2)                                         <---------ANAC58               ------     <---------ARR14(2)                                         <---------ANAC58           <---------     --------->ARR14(2)                 <---------REM1(2)   <---------ANAC58             --------->YAB1     --------->AGP1                     <---------ZAT14     <---------ANAC58            <---------YAB1  ----------------->AGL1 <-------GAMYB--------->ETT(2)--------->ANAC46               --------->AHL20(2) =================HOX2a_HOX2a >>>>>>>>>>>>>>>>>LFY  <---------ALFIN1                 <---------AHL20(2) =================HOX2a_HOX2a---------->ID1       ------>ZmHOX2a(1)        <-----------RAV1(1) ------ ============HOX2a_HOX2a<-----------RAV1(1)      --------->ANAC46    <----------DOF2 <---------YAB1--   tagtcccgatctaggaaccaatctctctgttgtcccattgtctacacttatcctccactctagcttccctgcttcttgtgttgccatattattatacccg  391300                         <---------ARR14(2)                         <---------ARR11(3)                                                      ---- --------ARR11(3)        --------->ARR14(2)                                                      <--- ---->LBD16    --------->TOE1(3)                                                               <----- --->ANAC46    --------->TOE2(3)                                                               <----- --GT1        --------->ZAT6    --------->LBD16        <---------TOE2(3)                       <----- --->LBD16  <-----------GT1<---------HSFB2a(1)         <---------YAB1                 ------------>CBF ------->ARR11(3) ---------->DOF2             <----------DOF2                    ------------>CBF----   agaacttgaatttttaaccctaaaccagaacttccgaacaaaatgagtcttttggttaagaatgttttgggtttgttttgatgagcaatgcaatttggag  391400    <-----------TBP  <---------------AGL15  --------------->AGL15  <---------ANAC55(2)                                                                             <-- ----------------->AGL2                                                 <---------YAB1           ---- ----->ALFIN1                                                           <---------AHL20(2)      <---- ------ZAT6              <-----------GT1                       <---------ZAT18                  <---- ----ANAC58             <---------ZAT14                        --------->ZAT18               -------- ----ANAC58            <----------DOF2                      ----------->GT1                  <------- ----ANAC46    --------->YAB1                              --------->ALFIN1                  -------- ------->GT1  --------->ICU4   <----------DOF2 <---------At4g35610     <---------AHL20(1)    <-------   tgttacatatatagaaattataagactttactacttttgaaaattcttgaactgattttaagtggtgaactaatattatttgttatctactactatatat  391500 --------->YAB1 ----------CBF ----->ATHB12 -----AHL20(2)                                         --------->AHL20(2) -----YAB1                                      <---------WOX13(1)    <---------AHL20(2) ->AHL20(1)                                 <---------MYB59   --------->ATHB12            <---------- --AHL20(1)             --------->AtLEC2 --------->ZAT18<---------AHL20(2)                <---------- ->AHL20(2)      <----------DOF2      <---------bZIP60(2)    <---------YAB1             <-----------STF1 --ARR11(3)   <---------ALFIN1---------->DOF2  <------------CBF   ----------->GT1   ---------->DOF2 <   tattgataactctctcccactttgatatgcaaaaaagatgaagtggcctaattgaaattttatatgatttgttaaattttgtgctacaaagtcgtcatcg  391600                                                                                                   <-                  --------->TOE2(3)                 --------->AHL20(2)                            ---                  --------->TOE1(2)            <-----------TGA1                                   ---                  --------->TOE2(2)           --------->ANAC58                                    <--                 <---------HSFB2a(1)          --------->bZIP60(2)        --------->DAG2       <------ -TGA1--------->ICU4    --------->SPL7--------->ATHB12   <---------AHL20(2)                   <------ -HVH21 <---------TOE2(3)   <-------TEIL      --------->ANAC58          ---------->DOF2       ------- ---------ICU4   --------->HSFB2a(1) <---------AHL20(2) --------->AHL20(2)                    -------   cataagtactgatgttgaaaccttcgtacatccatccatttcattgcaacgtcataaattttatatcatcgaaaaaaagtcacaaaaattagataataaa  391700                                                                           <---------AHL20(2)                                                                     <------MYB83                                                                     ----------->GT1                                                                     <------MYB46(1)   <-----------HVH21                                                --------->MYB59 --------AHL20(2)                                                 --------->CCA1(2) ------>AHL20(1)                       --------->ATHB12           --------->ARR14(1) ------>AHL20(2)                       <---------ICU4            --------->ARR11(1) -------AHL20(2)                      <---------AHL20(2)         <---------ARR11(3) ---AHL20(2)                <-------TEIL                         --------->ARR11(3)--------->TOE2(3) ---AHL20(1)            <---------YAB1--------->AHL20(2)         --------->ARR14(2)--------->TOE1(3) -->AHL20(2)  --------->CCA1(2)     --------->TOE2(3)            <---------ARR14(2)------->GAMYB -->AHL20(1)--------->CCA1(2)     <-------TEIL             <------ZmHOX2a(2)     -------->P     -----   tttaatgtcacaagagataagaagttttgattcatatacattaattgcacatctaaaaacgatccaagatttggtatataatcaaccctaacttgtacta  391800  Previous    Next  AGI:  At4g00910.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G08440.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14409.1); contains InterPro domain Protein of unknown function UPF0005 (InterPro:IPR006214) Range:  from: 389370    to: 391287    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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