Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                            --------->AtMYB61                                                                                          ------->GAMYB                                                                                          <---------ALFIN1                                                                                         <---------MYB55(2)                                                                                         --------->MYB46(3)                                                                                        -------->P                                                                                        ------>MYB46(1)                                                                                        ------>MYB83                                                                                       --------->MYB55(1)                                                                                      <---------MYB46(2)                                                                                      --------->DEAR3(1)                                                                                      --------->AtMYB61                                                                                      <---------MYB111(1)                                                                                      --------->MYB46(3)                                                                                      <---------MYB111(2)                          <-----------GT1                                             <---------MYB55(2)                         <-------TEIL  <----------DOF2                             --------->ANAC58                       <---------ARR14(2)                                          --------->ANAC58                       --------->ARR14(2)                        <---------ICU4    --------->ANAC46    <---------CCA1(2)  <---------GLK1(2)                 <----------DOF2         <---------ALFIN1 ---ALFIN1      <----------DOF2    <---------CCA1(2)    <---------ANAC58         --------->ANAC58 -->RAV1(1)    --------->TOE2(3)  ------->TEIL          <---------ANAC58         --------->ANAC58   attcccatctctcaaaacctttgcagattcacattgcatctctttaagagcctcaagtgctttctcagcattactctcttgccacacaccaaccacagcg  385900                                                                         --------->TOE2(3)---------->DOF2                                                                         --------------->AGL15                                                                        <-----------------AGL1                                                               --------->ALFIN1         --------->ANAC58                                                             <---------ANAC58    ----------->GT1                                                             <---------ANAC55(1)----------->GT1                                                             <---------ANAC58  --------->DAG2                        ---------->DOF2               ----------->RAV1(2)<---------------AGL15                 --------->WOX13(1)             ----------->RAV1(2)     <-----------------AG     ----           --------->YAB1 --------->DAG2  <------NtERF2      <---------ANAC46---------->DOF2  -------     --------->YAB1 --------->YAB1 ---------->DOF2   ------->TEIL    ------>ZmHOX2a(1)  --------->ANAC58   tttaaaatcagaatcaaaacaatcacaaaaggctcaacaaaggcctcgaaccctgaacctgagccgtgttcctcacctaaaaaggctaaaacgaaagaga  386000                 <-----------ARR10                 --------->GLK1(2)                 <---------ARR14(2)          --------->HSFB2a(2)      <---------ALFIN1     --------->ZAT2            <---------ARR11(1)     --------->At4g35610       <---------ARR14(2)     <---------ZAT2            --------->ARR14(2)     <---------ABI4(2)      <---------ANAC58                                                  -------     <---------At4g35610    <---------ANAC58                                           <---------ZAT2 --------->ANAC58--------->ARR14(2)                                             ------>ZmHOX2a(1) --------->ANAC46<---------ARR11(3)                                      <----------DOF2  ----------- --------->ANAC58--------->ARR11(3)                                <---------ANAC58   --------->ANAC58 ----->CCA1(2)  <---------GLK1(2)<---------ANAC46                  <---------ANAC58   --------->ANAC58 ---->GT1 <---------HSFB2a(2) <---------CCA1(2)               ---------->DOF2  --------->TOE2(3)<----   taaacgcagcaccgagaagaatcttcacaagcgtatcgtcgaattgttccaatacaagatgccataaaggcttgcctttctccttagcaagctcgttaaa  386100                --------->ARR14(2)                <---------ARR14(2)               <------NtERF2             <---------ANAC46            <------NtERF2            <---------LBD16           <---------RAP2.3(1)           <---------ERF1           <---------RRTF1(1)          <---------DEAR3(1)                                                                        -          --------->ATERF1(2)                                                                       -          <---------ATERF1(2)                                                                      --          <---------RAP2.6(2)                                                                   -----          <---------RAP2.3(3)                                                                   -----          <---------RRTF1(3)                                                                    -----          <---------RRTF1(2)          <-----------GT1     --------------->AtSPL8    ------->GAMYB----    <----------DOF2              ----------->GT1         <---------ANAC58          --------->MYB46(3) --->DOF2 <---------RAP2.3(2)  <---------MYB52(1)        <---------ANAC58         --------->At4g35610 >GT1  ----------->HVH21<---------ARR11(3)               <---------ANAC46         <---------At4g35610 -------GT1------>NtERF2--------->ARR11(3)          <---------ICU4       <---------ICU4       <------   accgtacttttgacggcggatttggacatcttcgctagttaaacccttgtctaatcttgtcttgtactctttcaaacattgctcaacagaccaagaccac  386200 -------->HSFB2a(2)                                   --------->At5g28300 ----->NtERF2                                        ----------->GT1 ------->DEAR3(1)             ---------->DOF2     --------->MYB52(1) ---->ANAC46            <---------MYB46(3)    <---------------AGL15     ------->TEIL ---->ANAC58          <---------MYB52(1)--------->TOE2(3)            <---------ANAC46 ---->ANAC58        --------->ATHB12    <----------DOF2<---------MYB52(1)               *TSS -->NtERF2        ------>ZmHOX2a(1)     --------->TOE1(3)   <-----------GT1          <---------MYB52(1) ---ALFIN1     ------>ZmHOX2a(1)   <----------DOF2------------>MYB.PH3(1)       <---------ARR14(2)---   gccgagaacgacttctcctcctccattggttcaaaagctttactttaactcaaaacggttattttcttcttgtgtatgtgagaaaccgtttatcaaattc  386300                                                                              --------->ARR11(3)                                                                   <-----------GT1                                                              <---------YAB1  <---------ARR11(3)                       --------->AHL20(2)             <-----------GT1        <---------GLK1(1)              <---------ATHB12                    --------->DAG2   ------------>AtMYB77            --------->WOX13(1)            ----------->RAV1(1) <---------AHL20(2)    <-----------GT1          ------------>CBF   ------------>CBF    ---------->DOF2<------------CBF <----------DOF2 --->ZmHOX2a(1)   ------------>CBF       <----------ID1<---------At5g28300   <---------CCA1(2)   ctgtagaaaaatttcaatcaaacaatgaaatatcaatttttaaacaacaaataaagttacagtttttattgacggtttgatatcttttacaacatagaac  386400                ------>ZmHOX2a(2)               --------->CCA1(2)               <------ZmHOX2a(2)              <---------AGP1              --------->AGP1              --------->ARR11(3)              <---------ARR11(3)          ---------->DOF2      --------->YAB1     <---------AHL20(2)               --------->GLK1(1)  --------->AHL20(2)                 --------->ARR14(2)  <---------AHL20(2)               --------->LBD16      ----------->GT1                      -------- --------->AHL20(2)   --------->AHL20(2)           <---------ARR11(3)         ----------->GT1<-------   ataataaataatcaaagatctaaaaaaaatacaaacccagaaacccaaaacaagaactgagttaaacagagagagaaacagagtataaattcttacctaa  386500                                                                           --------->ATHB12                                                               ---------->DOF2                    <--   --------->ANAC46                                          --------->ANAC58                <-------   --------->ANAC58            --------->AHL20(2)      <-------TEIL   --------->AHL20(2)     <-------   --------->ANAC58        --------->ATHB12       ---------->DOF2----------->GT1             <------- ->TOE2(3)               <-----------TGA1     ---------->DOF2--------->ANAC58        ---------->DOF2 --MYB59             <----------DOF2      --------->YAB1--------->WOX13(1)--------->ICU4     <-------   attccaagaaaaaccagttagagctttcgtcattgaaatatcaaacatgaaagaaagtccatcaagaaagaaaaaaatgatttgactaaaagtttgcttg  386600                                                                                                    -     --------->At4g35610                                                                            -     <---------At4g35610                                                                       <-----  ---------->DOF2                                                                             <------ --------ID1                                                                               ---------- --ANAC58                                ----------->GT1<-----------------AGL3         <----------ID1 --ANAC58                         ----------->GT1 <---------AHL20(2)                  ----------->GT1 --ANAC46                        --------->DAG2   --------->AHL20(2)                ---------->DOF2 < --AtLEC2                       ---------->DOF2  --------->AHL20(2)           --------->ZAT6---------   gagacaaagctgaagaagacccaagaatttttgaaaaagtaagaagtaaaattttattcccaaatttgattcgcgttctaccactaaaaaggaaaaagga  386700                                                                                                  <<<                                                                                              -------                                                                                  <---------AHL20(2)                                                                                 --------->AHL20(2)                          --------->ANAC55(2)                                    --------->ARR11(3)     --------->ATHB12     <---------ANAC58                                       <---------ARR11(3) -------->ARR11(3)        <---------ANAC55(2)                                    --------->AHL20(1) -------->ARR14(2)        <---------ANAC46                                       <---------AHL20(2) -ZmHOX2a(1)              <---------ANAC55(1)               <----------DOF2 <---------YAB1   <------- ----ID1                  <---------ANAC58           <---------ICU4<---------ANAC58       <----------DOF2 >DOF2            <---------ANAC58               <---------AHL20(2)<---------ANAC46      <---------ANAC58 ---------ARR14(2)<---------ANAC58               --------->AHL20(2)<---------ANAC58      <---------ANAC58 >DAG2            <---------ANAC46            <----------DOF2 --------->ATHB12   <---------AHL20(1)   caaatcttgatttggacaagtcgtggtttcgtgtttgaaactcgttgtcttttaatttttgcctttattgcttaaattttgaatatattttgctttgttc  386800  Previous    Next  AGI:  At4g00900.1    Description:  ECA2 (CALCIUM-TRANSPORTING ATPASE 2, ENDOPLASMIC RETICULUM-TYPE); calcium-transporting ATPase. Identical to Calcium-transporting ATPase 2, endoplasmic reticulum-type (ECA2) [Arabidopsis Thaliana] (GB:O23087); similar to ECA3 (ENDOPLASMIC RETICULUM-TYPE CALCIUM-TRANSPORTING ATPASE 3), calcium-transporting ATPase/ calmodulin binding [Arabidopsis thaliana] (TAIR:AT1G10130.1); similar to ECA1 (CALCIUM-TRANSPORTING ATPASE 1, ENDOPLASMIC RETICULUM-TYPE), calcium-transporting ATPase [Arabidopsis thaliana] (TAIR:AT1G07810.1); similar to calcium-transporting ATPase [Arabidopsis thaliana] (TAIR:AT1G07670.1); similar to type IIA calcium ATPase [Medicag Range:  from: 382663    to: 386288    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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