Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                              <--------                                                                                           xxxxxxxxxx                                                                                          <xxxxxxxxxx                                                                                          <xxxxxxxxxx                                                                                        xxxxxxxxxxxxx                                                                                        xxxxxxxxxxxxx                                                                                        xxxxxxxxxxxxx                                                                                        xxxxxxxxxxxxx                                                                                       <---------ANAC58                                                                                       <---------ANAC58                                                                                      <xxxxxxxxxxxxxx                                                                                      xxxxxxxxxxxxxxx                                                                                   <xxxxxxxxxxxxxxxxx                                                                                  <xxxxxxxxxxxxxxxxxx                                                                              <---------CCA1(2)                                                                            <---------AHL20(2)                                                                            --------->AHL20(2)<xxxxxx                                                                          --------->AHL20(2)xxxxxxxxx                 --------->ALFIN1                           <---------ANAC55(2)<---------ARR11(3)              --------->DAG2                                --------->ANAC55(2)--------->ARR11(3)  --       --------->TOE2(3)                              <---------YAB1   --------->AHL20(2) xxxxxxxxxxx      --------->ZAT6                         --------->AHL20(2)        --------->AHL20(1)<------NtERF2     <---------TOE2(3)          <---------At5g28300<---------YAB1      <---------AHL20(1)<xxxxxxxxxxx    <-----------GT1--------->ALFIN1 --------->AtLEC2 <-----------GT1   <---------AHL20(2)------>NtERF2  --------->AHL20(2)   <------ZmHOX2a(2)     <---------AHL20(2)       --------->AHL20(2)<xxxxxxxxxxxx -----GT1    ---------->DOF2   <-----------GT1   <---------ICU4      <xxxxxxxxxxxxxxxxxxxsmallRNA(se3)   taaatttaacattagaaaagtgtggatcactatttaccattcaaattttaaatattatcaatacatatttgaataaatttatatcttaggcgggccttat  348700             <---------AHL20(2)             --------->AHL20(2)           <---------AHL20(2)           --------->AHL20(2)         --------->AHL20(2)         <---------AHL20(2)       <---------AHL20(2)     --------->AHL20(2)     <---------AHL20(2) --DOF2--------->AHL20(2) xxxxxxxxxxxxx>smallRNA(si3) xxxxxxxxxxxxxsmallRNA(fl3) xxxxxxxxxxxxxsmallRNA(le3) xxx>smallRNA(s) xxxxxxxxxx>smallRNA(se3) xxx>smallRNA(i)                        <---------ARR14(2) xxxxxxxxx>smallRNA(si3)                <---------ARR11(1) xxxxxxxxxsmallRNA(le3)                 <---------ARR11(3) xxxxx>smallRNA(si3)                    <-----------ARR10 xxxxxsmallRNA(le3)                     --------->ARR11(3) xxxxsmallRNA(le3)                      --------->ARR14(2) xxxxxxxxxxxxxxxxxsmallRNA(se3)        <---------GLK1(1)                     <---------YAB1 xxxxxxxxxxxxxx>smallRNA(i2)       --------->AtLEC2                          <---------AHL20(2) --------->GT1                  <-------TEIL                                --------->AHL20(1) xxxxxxxxxxx>smallRNA(si3) --------->AHL20(2)                               <---------AHL20(1)      - xxxxxxxxxxxxsmallRNA(si3) --------->YAB1                                   --------->AHL20(2) ------ xxxxsmallRNA(i)        --------->YAB1 <---------CCA1(2)     --------->YAB1--------->YAB1    --------   ctagtatatatatatatatataagtagaataatattcatgcatatcttaagaaaacccaaaaattagaatgtatgaaatataattgcataatcgaaccaa  348800                                                                        ----------->RAV1(1)       ---                                                                       <----------ID1             --- --------->DOF2                                               --------->ZAT6                   <----- --->MYB52(1)                                               <-----------GT1                  -------- ->MYB46(3)            --------->AHL20(2)                  --------->AHL20(2)         <----------DOF2   gggaaagaagaattgttttgcataatgaaatagaattagtttatattgtatttgtttaaaattaactctcaaaacaacaaaactctatctttcaatttaa  348900                                                                ----------->GT1                                                             --------->ICU4                                                           --------->YAB1                                         <------MYB83     <---------YAB1            --------->HSFB2a(2)          <------MYB46(1)--------->YAB1      <---------ARR11(3)                <---------------AtSPL8--------->YAB1      <---------ARR14(2)                --------->MYB46(2)--------->ICU4      --------->ARR14(2)                --------------->AtSPL8<---------ICU4      --------->ARR11(3)     --------->MYB46(3)        <---------YAB1   --------->MYB46(3)      ----------->RAV1(1)       --------->YAB1 ----------->RAV1(1) --------------->AtSPL8         <---------YAB1               ----------->GT1 ------>ANAC46       <---------------AtSPL8 <-------TEIL<---------ICU4           <---------ANAC46 ---->GAMYB --------->HSFC1(1)          --------->MYB111(1)<---------ICU4      --------->ZAT14 ------GT1  <---------HSFC1(1)          --------->MYB59--------->ICU4          <---------ZAT14 ->AHL20(2) <---------HSFB2a(2)        <--------P  --------->AHL20(2)   <-----------GT1   -----------   cagcaacaaatcttctagaattgaatgtacaacaaatgcaagtaggtacatgatataataataataatgtgatataactagtttagtgaaatgagttaaa  349000                           ----------->GT1                         ---------->DOF2                    --------->ALFIN1                                          <-----------HVH21                  <---------ANAC46                                           <---------MYB46(3)            <---------AHL20(2)                                              <---------AtMYB61      --           --------->AHL20(2)                         <-----------HVH21     --------->ALFIN1      <-- --------->YAB1   <---------bZIP60(2)   <------ZmHOX2a(1)            ---------->DOF2    <---------At4g35610 >GT1      <---------AHL20(2)--------->AHL20(2)<---------WRKY38(1)--------->At5g28300   --------->At4g35610   caaaaataacaaaataaatgaagtggagaaagtaaatgaagaggaagagtcatcgctgtcatggtcgcagttaaagaggtggtcagagtcagaagtctcc  349100                                                  <---------ALFIN1                                                  --------->AtMYB61                                                 --------->MYB46(3)                                                ------>MYB83                                                ------>MYB46(1)                                               --------->MYB55(1)                                               <---------ALFIN1                                               --------->ANAC46                                              <---------MYB111(1)                                              --------->DEAR3(1)                                              --------->MYB46(3)                                              <---------MYB111(2)                                              <---------MYB55(2)                                             --------->ANAC46                --------->AHL20(2)           --------->ANAC58                <---------AHL20(1)           --------->ANAC58         ------>MYB83                      <---------ALFIN1         ------>MYB46(1)                  --------->MYB46(3)                          <-----------ARR10      <---------HSFC1(2)                 ====================================HOX2a_HOX2a      --------->HSFB2a(1)                ========================HOX2a_HOX2a       --------->ANAC58      <---------HSFB2a(1)                <------ZmHOX2a(2)                         --------->ANAC58      --------->HSFC1(2)                 --------->CCA1(2)                      --------->LBD16     -------->P *TSS                    <---------ARR14(2)                     --------->ANAC46 --------->ANAC58    <-----------GT1    --------->ARR11(3)                --------->ARR14(2)    ----- --------->ANAC58--------->ATHB12       <-----------ARR10              <---------ICU4<---------GLK1(2) --------->ANAC46<---------AHL20(2)     --------->AGP1                ------>ZmHOX2a(1)         <---- -------->DOF2  --------->AHL20(1)      --------->ARR14(2)           --------->TOE2(3)--------->GLK1(2) -------MYB52(1)<---------AHL20(2)      <---------ARR11(3)------>ZmHOX2a(1)   <---------LBD16   -----   cttaagcaaccttccaaatttattgacatttctgtttcccaagatccacccaccactctcctctctctcttcctcatttctgcgcaagaatctaaaccaa  349200                                                                                        ------>MYB83                                                                                      <---------MYB111(1)                                                                                      <---------MYB111(2)                                                                                      --------->AtMYB61                                                                                      <---------MYB46(2)                                                                                      <---------MYB52(2)                                                                                      <---------MYB59                                                                                    -------->P                                                                                    ------>MYB46(1)                                                                                    ------>MYB83                                                                          --------->YAB1--------->MYB52(1)                                                                          --------->TOE1(3)                                                                          --------->TOE2(3)                      <---------------AGL15                             <---------ARR11(3)                     ----------------->AG                               <---------ARR14(2)                     <-----------------AGL1                            <---------GLK1(2)------>MYB46(1) ->MYB83------>ZmHOX2a(1)     <------ZmHOX2a(1)                  <-------GAMYB     ------>ZmHOX2a(1) -----CCA1(2)        ----------------->AGL1             <---------ANAC58--------->ARR14(2)         -- ->MYB46(1)         ----------------->AGL2              <---------ANAC58--------->GLK1(2) --------->MYB46(3)   atctctcatcctctcttctatgtcccaaaacaggaacataactactactactaccatgtcttgactctgttgagaatcttaaatcctacctaacctccaa  349300                                                 <----------DOF2  --------->ANAC58                                                --------->HSFB2a(1) ---------->DOF2                                       ----------->HVH21          --------->ANAC58                    <<<<<<<<<TBF1     --------->LBD16       --------->MYB46(3)             <---------ARR14(2)       --------->At5g28300------>ZmHOX2a(2)             --------->ARR14(2)      <---------ANAC58   <---------GLK1(1)             <-----------ARR10       <---------ANAC46   --------->GLK1(1)           <---------MYB46(3)        <---------ANAC58   <------ZmHOX2a(2)      ---------->DOF2              <---------ZAT14     --------->ARR14(2) --------->GT1   <<<<<<<<<TBF1     --------->ZAT14     <---------ARR14(2)   tgggtaagaagagcggttcttcttcttcttggctcactgccgtgaaacgagctttccgatctcccaccaagaaagaacacaacaacaatgctcatggtaa  349400                                                      <---------ANAC58                                                      <---------ANAC58                                                  ------>ZmHOX2a(2)                                                 <------ZmHOX2a(2)                            --------->ARR14(2)  --------->ARR14(3)                            <---------ARR14(2)  <---------ARR14(3)                          <--------                         <---------ANAC46       --------->ARR14(2)                          <--------                        <-------TEIL            --------->ARR11(3)               <-------MYC3                     <---------HSFB2a(1)        --------->AGP1                   ------->MYC3               <----------ID1   <----------DOF2 <---------ARR11(3)            <-----------GT1        <---------------------WRI1              <---------ARR14(2)       <---------AHL20(2) <--------   tgaagtcgacgaagatgaagacaaggttcgtatactttctctagtctcgagatcttgcttcttaattcttgtttttttattcacatgctctgtttcttgt  349500                                                                            <-----------ARR10                                                                            --------->ARR14(2)                                                                            --------->GLK1(2)                                                                <-------GAMYB                                                               <------MYB83 <---------ARR11(3)                                                               --------->MYB52(2)                                                               <------MYB46(1)          <---------YAB1                                                               <---------MYB46(3)     <---------ICU4                                                               ----------->GT1--------->TOE1(2)                                                             <---------MYB52(1)       --------->YAB1       <---------ANAC46                                    <---------O2     --------->ARR11(3)    <---------MYB52(1)                         ---------->DOF2<---------TOE2(2)      <---------ATHB12 -ANAC46           <---------YAB1              ======================bZIP_DOF --------->TOE2(2) -ANAC58        <---------YAB1          <---------At4g35610=============MYC_MYB  --------->ANAC46---- -ANAC58      <-----------GT1           --------->At4g35610<---------TGA1a  <---------ARR14(2) <-----   ttctctgttttgtatattactataattcatatgctctgtttctgcagaagaaagagaagagacgttggttatttagaaaatctacgaatcatgactctcc  349600  Previous    Next  AGI:  At4g00820.1    Description:  IQD17 (IQ-domain 17); calmodulin binding. similar to IQD18 (IQ-domain 18) [Arabidopsis thaliana] (TAIR:AT1G01110.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO24314.1); contains InterPro domain IQ calmodulin-binding region (InterPro:IPR000048) Range:  from: 349116    to: 351550    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version