Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                  --------->ANAC58                --------->ANAC46                --------->ANAC58           ------>ZmHOX2a(1)              ====================HOX2a_HOX2a         ------>ZmHOX2a(2)            --------->LBD16        <------ZmHOX2a(2)           <---------LBD16       <---------ARR14(2)       --------->ZAT2       --------->ARR14(2)       --------->At4g35610                                ---------->DOF2       <---------GLK1(2)        <---------At4g35610                               ------->GAMYB   ---   <---------HSFB2a(2)        --------->MYB46(3)        <---------MYB46(3)       --------->MYB46(3)--   --------->HSFB2a(2)      ----------->RAV1(1)        ------>ZmHOX2a(2)  --------->At4g35610   -----   <---------LBD16       --------->ANAC46 <------ZmHOX2a(1)               --------->ZAT2        -----   tccttctcggatcctcacaaggcatatgagcaacagcttccgcaggacaatactcgatcggttgcaaatgctgaccagcttcaaccaaagtcactaatcg  310100              ------>ZmHOX2a(2)             <---------At4g35610                        <------NtERF2             --------->At4g35610                       <---------RAP2.6(3)             <------ZmHOX2a(2)                         ------>NtERF2            <-----------ARR10                         --------->RAP2.6(2)            --------->ARR14(2)                        --------->DEAR3(1)            <---------AGP1                            --------->ANAC46           <---------CCA1(2)                          --------->RAP2.3(2)        <---------LBD16                               --------->RAP2.3(3)    --------->WRKY38(1)                              --------->RAP2.3(1)   <---------MYB52(1)                                --------->ERF1  <---------At4g35610                                --------->ATERF1(1)  <-------GAMYB      --------->DEAR3(1)     --------->ORA47(1) <---------ANAC58    <---------ANAC46       ------>NtERF2 <---------MYB46(3) <------NtERF2           <---------RAP2.6(3) <---------ANAC58  ------>NtERF2           <---------ETT(1)                            <------ZmHOX2a(1) ------>DEAR3(1)  --------->bZIP60(1)      --------->DEAR3(1)                      ---------->DOF2 ---->NtERF2<---------ARR14(2)            --------->DEAR3(2)               ----------->GT1         <- ---->At4g35610----------->HVH21    <---------ANAC46<---------ATERF1(1)    <---------ANAC46        <- ------------------>TaNAC69(2)  --------->At4g35610 --------->At4g35610   <------ZmHOX2a(1)        --   ctgccgttgcctcggatctgacgccgtagagagaagcagcgtttgccgaccagaagccgccatggaatcaccaagaggagtgaataaaaggatgaagaag  310200                                                                                      ------->MYC3                                                                                      <-------MYC3                                                                                      ------->MYC2                                                                                      <-------MYC2                                                                                     <---------ANAC55(2)                                                                                     --------->TGA1a                                                                                     <---------O2                                                                                     --------->O2                                                                                     --------->ANAC55(2)                                                                                     ================                                                                                     <---------ANAC58                                                                                     <---------ANAC58                                                                                     ================                                                 >>>>>>>>>WRKY18                     <---------TGA1a                                          --------->ANAC58                         <-----------GT1                                       <---------ARR14(2)                     <-------TEIL                                       --------->ARR14(2)                     ----------->ARR10                                      <------ZmHOX2a(1)                      ==================MYC_MYB                         <---------MYB52(1)     --------->WRKY12             <--------P <-----------HVH21                         <---------ARR14(2)     ----------->HVH21 <----------DOF2 <-------TEIL               ---------->DOF2    <---------ANAC46      =======================================MYC_MYB    --------->ANAC58     --------->ARR14(2)------>NtERF2<-------GAMYB    <-----------RAV1(2)  <------    --------->ANAC58------------>AtMYB77  --------->ANAC58        =============================bZIP_DOF --------------AtSPL3  <---------MYB46(3) --------->ANAC46     --------->ANAC58  --------->CCA1(2) --------------AtSPL8<---------At4g35610 --------->ATERF1(1)   --------->ANAC46 <---------ARR14(2) ------------->AtSPL3--------->At4g35610<---------ATERF1(1)    --------->ANAC58 --------->ARR14(2)<--   agaagtacgataccgaagaaagcagcggttacgatgtcgaggagacgccattgacgagggttaccacgctttgatgcaggtagattcacgtgtcccatag  310300                                                                                                   <-                                                    <-----------ARR10                             <--                                                    --------->GLK1(2)                          ------                                                    <---------ARR11(3)                  ------>ZmHOX2a(2)                                                    <---------ARR14(2)                 --------->At4g35610                                                   <---------CCA1(2)                   --------->CCA1(2)                                 --------->HSFB2a(2)--------->ARR11(3)                 <------ZmHOX2a(2)                          <---------ANAC58      <-------TEIL                          --------->ARR14(2)                          <---------ANAC58   <---------At4g35610                      <---------ARR11(3)                       <----------DOF2       --------->At4g35610                      --------->AGP1                     <---------HSFC1(2)   <------ZmHOX2a(2)                           <---------AGP1<         --------->MYB46(3)      <---------HSFB2a(2)--------->ARR14(2)                <---------ARR14(2) ========bZIP_DOF    --------->HSFB2a(1) --------->ARR14(2)                           --------->ARR11(3) ========bZIP_DOF    --------->HSFC1(2)  <---------ARR14(2)               <-------TEIL<---------ARR14(3) ---CCA1(2)     --------->HSFB2a(2)     --------->At4g35610       --------->YAB1     --------->GLK1(1) --------DOF2   <---------HSFB2a(2)  <---------At4g35610         <---------YAB1      <---------GLK1(1)   ctttagcttcaaccagtactcgaagctttcgtcttcgagagcagatcagatgcaaatcttagggtttataataagattcaattttggagatctgaagaat  310400               <---------ICU4              --------->AHL20(2)              <---------AHL20(1)              --------->AHL20(1)           --------->AHL20(2)        --------->YAB1   <------NtERF2  <---------RAP2.3(1) <---------At1g77200 <---------RAP2.3(3) <---------DEAR3(1) <---------DREB2C(2) <---------DEAR4(1) --------->ETT(1)                                 --------->YAB1 ----------HVH21                      <---------ANAC58 ---------RAV1(1)   <---------YAB1    <---------ANAC46<---------ARR11(3) --->GLK1(2)  <---------AHL20(2)      <---------ANAC58--------->ARR11(3)          *TSS     <---------ARR14(2) ---------ORA47(1)<-----------GT1  <---------MYB52(1)<---------GLK1(2)         <----------DOF2     --   ttgtcggcgattataaaatattactatttcgcaatccgttgtgtgagtgtgatcaaaatctcatttagttttttctcagtgctttagtaagcgtctctgg  310500                                                                      --------->YAB1                                                                 <---------MYB52(1)                                                                <-------GAMYB                                                               <---------ANAC58                                                               <---------ANAC46                                                               <---------ANAC58                                                           --------->KAN4(2)                                                          --------->HSFC1(2)                                           <---------YAB1 <---------HSFC1(2)                                        <---------YAB1    --------->HSFB2a(1)              <---------TOE2(3)                         <------------CBF  ----------->TBP<---------HSFB2a(1)        <---------------AGL15                       --------->AHL20(2)--------->YAB1   <---------KAN4(1)          <---------DAG2             --------->At5g28300  <---------TOE2(3)       --------->KAN4(1)       <-----------GT1            ----------->GT1 --------->ATHB12     --------->AHL20(2)  <---------YAB1  <----------DOF2 ------->ALFIN1     <---------ANAC55(2)--------->AHL20(2)<---------KAN4(2)       <-----------GT1-----   tgtctggcgaagcacggtgaatacataaattgatttaagaatattataaaaaaaaatggaatgttccgttgattatagtttttttaactttttgaggcta  310600                                                                 ----------->HVH21                                                                 --------->WRKY12                                                          ------>ZmHOX2a(2)                                                        <---------ARR14(2)                                           --------->AHL20(2)  ------>ZmHOX2a(1)                                   <---------YAB1       --------->ARR14(2)                               <---------ANAC58       <---------MYB46(3)                <---------At4g35610 --------->ARR14(2)            <---------ANAC46 <<<<<<<<<<<<<<<<<LFY      <---------YAB1--------->At4g35610 <---------ARR14(2)       <---------At4g35610   >>>>>>>>>>>>>>>>>LFY   --------->WRKY18(1) ---->MYB52(1)  ----------->GT1<---------ANAC58<-----------GT1 <----------DOF2    --------->KAN4(1)   atggatttgggccttgaaatgtaatttgggctggcttatgagaaataatataccagtggatcgtcctttgacggtcaagatagaacattcagattacatt  310700                                  <------MYB46(1)                                                   <                                  <------MYB83                                                  <----                               <---------MYB52(1)                                               <----                             <------MYB46(1)                                                    -----                            --------->MYB59                                                --------->AHL20(2)                          <---------MYB52(1)                                    <---------MYB52(1) <-                        <------MYB83                                           <-------GAMYB    -----                 ---------->DOF2 --------->MYB59                               <xxxxxxxxxxxxxxxxsmallRNA(i)           --------->MYB52(2)<---------DEAR3(2)                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)           <---------MYB46(3)<------MYB83                              xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)          <-------TEIL  <---------DEAR3(2)                            <-----------GT1    <----------DOF2       <---------ANAC58 <------MYB46(1)           <----------DOF2     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)       <---------ANAC58--------->MYB59   <---------GLK1(1)  <---------AHL20(2)----------->GT1  <-----   atagtataggcgttcgtttgaaagttcggttcggttcggtttgatttcagttctttcggttttaaaatgtagtatccattcggttattttgctttaaata  310800              --------->AHL20(2)              <---------ICU4             <---------ATHB51             --------->ICU4       <----------DOF2      ------>ZmHOX2a(2)     <------ZmHOX2a(2)    <---------ARR14(2)    <---------ARR11(1)    <---------ARR11(3)    --------->ARR11(3)    --------->ARR14(2)   <---------CCA1(2)    <---------CCA1(1)                                                         <--   <---------ARR14(1)   <---------RVE1(1)                                                       <---- ---------LBD16 <---------YAB1    <---------CCA1(1)                    --------->ARR11(3)   --------- -----AHL20(1)--------->ATHB51    --------->GLK1(1)                    --------->AHL20(1)   <-------- -----ARR11(3)<--------HAHB4      <---------RVE1(1)                    <---------ARR11(3)   --------- ---->ARR11(3)<---------AHL20(2) --------->ARR14(2)                   <---------AHL20(2)    <-------- ----------GT1-------->ATHB1     <---------ARR14(2)              <---------AHL20(2)     <---------AHL20(2) ---->AHL20(1)--------->YAB1  <---------ANAC46            <-----------GT1<---------GLK1(2) --------->ICU4 ----AHL20(2)<---------ATHB12<---------LBD16   <-----------GT1  --------->AHL20(2)      --------->AHL20(2)   ttttcggatctttcaattatttttggatattttcggatatttttgttattttcgagttttttactattttatatatattctcaagtatttttaattattt  310900                                                                   <---------YAB1                                           <---------RVE1(1)      <---------AHL20(1)                                          --------->ARR14(2)      <---------AHL20(2)                                          <---------ARR14(2)      --------->AHL20(1)                                       <---------ANAC46         <---------YAB1                                      <---------LBD16          --------->AHL20(1)     --------->CCA1(2)          --------->AHL20(2)             --------->AHL20(2)    <---------ARR11(3)      <---------AHL20(2)               --------->AHL20(1) --------->HSFB2a(2)       --------->ARR11(3)                <---------AHL20(1) <---------HSFB2a(2)       <---------ARR11(3)                <---------ARR11(3) -------YAB1               --------->AHL20(1)           ============================================= -----AHL20(2)             --------->AHL20(2)           --------------->AGL15 >AHL20(2)                 <---------AHL20(2)       <---------MYB52(1)           xxxxxxxxxxxxxxxx>smallRNA(i) -AHL20(2)                 <---------AHL20(1)       --------->ARR14(2)          <-----------GT1 >ATHB51                  --------->AHL20(2) <---------YAB1  --------->AHL20(2)<---------CCA1(2)<---- -ICU4           <----------DOF2<---------AHL20(2)<---------MYB46(3)  <-----------GT1<xxxxxxxxxxxxxxx   attctagatataactaatacttttgaaaatatatttatatttcggatattatcggttacccaaaatattatatttctgtttgtatccattcggtttcagt  311000  Previous    Next  AGI:  At4g00740.1    Description:  dehydration-responsive protein-related. similar to dehydration-responsive family protein [Arabidopsis thaliana] (TAIR:AT4G10440.1); similar to Protein of unknown function DUF248, methyltransferase putative [Medicago truncatula] (GB:ABN08824.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24380.1); similar to unknown [Picea sitchensis] (GB:ABK25383.1); contains InterPro domain Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159) Range:  from: 307431    to: 310482    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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