Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    <--                                                                                                  <--                                                                                                  ---                                                                                                  ---                                                                           <---------------AGL15 <---                 --------->ANAC46                                          ==========================                --------->LBD16                                       <---------ANAC58           ----                <---------LBD16      --------->ETT(2)                 <---------ANAC58           <---  <---------GLK1(2)                  <---------ETT(2)                 <------MYB83        ----------- ------->DOF2  <---------LBD16<---------YAB1      <---------ATHB12    <------MYB46(1)    --------->DAG2   taaagaaactcaattttccagggaagaacagtctaattgtctacaaatttcaatcgatgtcaagttcaaatttggtgctcaattaagtcaaaaggtttaa  260600       --------->ARR14(2)       <---------ARR14(2)    --------->HSFB2a(2)    <---------HSFB2a(2)    <---------------AGL15    --------------->AGL15   <-----------------AG   ----------------->AGL1   <-----------------AGL1   <-----------------AGL2                                                                      <-----   <---------LBD16                                                                            -------   ----------------->AGL2                                                               --------->ANAC58  --------->MYB52(1)                                                                    --------->ANAC58 -------ICU4                                       --------->ANAC58                    <------NtERF2 ------HAHB4                                     <---------ALFIN1                     ------>NtERF2 ------>ATHB12                                --------->RAP2.6(2)                     <---------ATERF1(1) ------>YAB1                                --------->At4g35610                --------->ZAT2-------- ------ATHB12                               --------->ZAT2       --------->ZAT14     ----------->HVH21 ===================MADS_MADS               <---------At4g35610  <---------ZAT14     <---------DEAR3(1) ----->ICU4                      <------ZmHOX2a(1) --------->ANAC58      --------->MYB52(1)  -------- ------YAB1      --------->CCA1(2)          <---------ZAT2      <---------AtMYB61    --------->DEAR3(1) >GT1--------->LBD16           --------->ALFIN1 --------->MYB46(3) <---------ANAC46 --------->DEAR3(2)   tcattaccggaaatggaagaaatgggagaagaagaggagcgaatgcagcagccacggccagaagcagtggtctgtaaacggagttggccgacgcattgac  260700                                                --------->ALFIN1                                              <---------ANAC46                                           --------->bZIP60(2)                                           --------->DEAR3(1)                                           <---------TGA1a                                           <---------O2                                           --------->O2                                           <---------bZIP60(1)                                           <---------bZIP60(2)      <---------------AtSPL3               --------->TGA1a                                    -------     ================================================bZIP_DOF                                 -------     ---------->DOF2                       --------->bZIP60(1)                         <---------YAB1    <------ZmHOX2a(1)                 --------->O2 --------->ALFIN1                   --------->AHL20(2) <------ZmHOX2a(1)                    <---------O2 <---------ANAC46             ------>NtERF2 ------- ----LBD16           <---------DEAR3(2) ----------->HVH21                      --------->ANAC58 -->MYB52(1)    <---------ZAT2        --------->ANAC46                --------->YAB1--------->ICU4 --->HVH21      --------->ZAT2        --------->ANAC58          ----------->GT1--------->ANAC58 ->WRKY12    <---------At4g35610      --------->ANAC58  <------ZmHOX2a(1)      --------->ANAC46   ggaggaggaaagtaccgctgcttcggttcaaatggatgagacgcgacgtcgtggtggaggagcaatcggtaaacatcatcgacgccatttttatacaagg  260800                          <---------ANAC46                                       --------->AHL20(2)                     <---------O2                             =====================================HOX2a_HOX2a                   <-----------HVH21                          <------ZmHOX2a(1)  <---------AHL20(2) -->ANAC46     <---------ZAT2                        <---------ANAC46         <----------DOF2      -- -->ANAC58     <---------At4g35610 ---------->DOF2--------->ICU4       <---------ATHB12     ------>ZmHOX2a(2) -->ANAC58   <---------ZAT18 ----------->GT1      <---------AtMYB61   <---------TOE2(3)   --------->ARR11(3)   aaaacagaacaatagtctgctcgtcgtggctgagttaaaaaggaagaaggtaatggtggagacaggaagactaatgaagtcttttaatttgtgatctaga  260900                                                   --------->ANAC46       <---------ZAT14                            <---------LBD16       --------->ZAT14                      ---------->ID1            <---------TOE2(3) -------->DOF2   --------->CCA1(2) <---------ARR11(3)        <------NtERF2      <----------DOF2   gcaaagcagagcagagaagagacgatgaattgaagaagataacttcgtcgtctacggagagtcggagagactagggtttcttcttttgatatcaacaagg  261000                                                                                                 <---                                           <---------At4g35610                                   <---                                           --------->At4g35610                                -------                                 <-------GAMYB                                               <-------                                --------->MYB52(2)               <-----------GT1        <----------DOF2                                <---------MYB46(3)     --------->LBD16                  =============                              <---------MYB52(1)     <---------LBD16        <---------ANAC58---------                   ---------->DOF2       <-----------GT1       --------->YAB1      <----------DOF2        --------->AtLEC2     <---------MYB52(1)    <-----------GT1       <----------DOF2-------------     <-------TEIL  *TSS  --------->MYB52(1)----------->RAV1(2)<---------YAB1<---------ANAC58<--------   gtttaagttcattcaaatcacaaaagaaaccggtttgttgatttcacctgaattttccggttttattataccagtctttcgttttcttttcttttttaat  261100 ------------>CBF ------ICU4                                                             --------->AHL20(2) ------AHL20(2)                          --------->ATHB12             ----------->GT1 -->YAB1                           <---------AHL20(2)                 --------->ANAC55(2) --AHL20(2)                        --------->AHL20(2)                 <---------ANAC55(2)      <----- =================================MADS_MADS                         <---------ICU4        <---------AHL20(1) >AHL20(2)                     <----------DOF2                      --------->YAB1        --------->AHL20(1) -->AGL15--------->SPL7        <---------DAG2  ---------->ID1      <---------ATHB12       <---------ARR11(3) -AHL20(2)        <---------------AGL15 <---------YAB1           --------->YAB1--------->ZAT6<-------   aaatccaatcggaccgcttcatatttttagtagctttttaatttgattagtcgtcttaaactcagattaatcatgtaattaacactgatcaatatataaa  261200                     <---------At5g28300                    --------->MYB52(1)                   <---------SPL7               --------->WRKY38(1)               --------->WRKY12               --------->WRKY45              <---------MYB52(1)                                                                   --              --------->DOF5.7(2)                    <---------ALFIN1                           -----             <-------GAMYB                    ---------->DOF2               <---------YAB1 --------->GLK1(1)            --------->MYB52(2)          <---------ANAC58            <-----------GT1        <---------At4g35610 ------GT1  <---------MYB46(3)          <---------RAP2.6(2)   --------->CCA1(2)            --------->At4g35610 --AHL20(2)<-------TEIL                 <---------ANAC58     <---------ARR11(3)   <-----------GT1 ---   caatacatgtaagttcgttgacttacggtctattctctatttgcggtctaaagtaccacactagatatatatacccttgtgatttaactcgagagctcca  261300                                                                                       <-------------                                                                                       <-------------   ---------->DOF2                                                                    ---------->DOF2  --------->YAB1                                                                 ----------->GT1 <---------ATHB12                   --------->ANAC58                       --------->ANAC58 <<<<<<<<<ARR2                      --------->ANAC58          <---------MYB46(3)<---------TOE2(3) ------->WOX13(1)<---------------AGL15                      <---------GLK1(2) ---------->DOF2 ------>RAV1(1)  --------------->AGL15                    --------->ICU4   --------->ANAC58<-------TEIL ------>MYB46(3)<-----------------AGL3           <---------YAB1         --------->ALFIN1   --------->ZAT14   acaatcaaagctaaatgtactacaagtggtatcagagcaagtcatgttattgcgattgccaagattgttgaagggtgaagcaaaggtagaaagtacagac  261400                                                                                          --------->ANAC58                                                                                          --------->ANAC58                                                                                        ---------->DOF2      <---------ANAC46                                                             --------->LBD16      --------->ETT(1)                                                            <-----------RAV1(2)    <-----------HVH21                                                <----------DOF2   <------ZmHOX2a(1) --AtSPL3                 <-------TEIL--------->ANAC46      <---------YAB1       --------->LBD16 --AtSPL8               <---------GLK1(2)                   <---------AHL20(2)<-----------------AGL1   aaatagtgtcggataaatgagggatagattcacatattagacccaatatgttgaatacaaatattatttgcctttgtttttcccccagaggaaagaaact  261500  Previous    Next  AGI:  At4g00620.1    Description:  tetrahydrofolate dehydrogenase/cyclohydrolase, putative. similar to tetrahydrofolate dehydrogenase/cyclohydrolase, putative [Arabidopsis thaliana] (TAIR:AT4G00600.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39537.1); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040); contains InterPro domain Tetrahydrofolate dehydrogenase/cyclohydrolase; (InterPro:IPR000672) Range:  from: 259028    to: 261019    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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