Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                      --------->ANAC46                                                                   --------->DEAR3(1)                                                                 ------>MYB46(1)                                                                 ------>MYB83                                                                 -------->P                                                                --------->MYB55(1)                                                                <---------ALFIN1                                                               --------->DEAR3(1)                                                               --------->MYB46(3)                                                               <---------MYB111(2)                                                               <---------MYB55(2)                                                              --------->ANAC58                                                              --------->ANAC58                      <                       <---------ICU4                         --------->ANAC46                      -  --------->AHL20(2)   --------->YAB1                <---------AHL20(2)                          <---  <---------AHL20(2)  <---------ATHB12               --------->AHL20(2)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) <---------YAB1  --------->YAB1                    --------->AHL20(2)--------->LBD16     --------->MYB46(3) ------->YAB1    --------->TOE2(3)     --------->TOE1(3)     ------->GAMYB <-------TEIL----------->RAV1(1) -------YAB1     --------->TOE1(3)     --------->TOE2(3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) --------   attataaatttcccactaatcttaatcatcacacataaaaaccttaatcacatatatatataacacccacccccaaattcatcaagttgcaacaaatata  237200                                                                                                   <-              <---------AHL20(2)                                                                  <--             --------->AHL20(2)                                                                  <---     --------->TOE2(3)   <---------MYB52(2)                                                    <-----  --------->ANAC46       --------->MYB46(3)                                               --------->MYB52(1)  ------>MYB46(1)     <------ZmHOX2a(1)                                               <------ZmHOX2a(1)  ------>MYB83<---------YAB1                                                       xxxxxxxxxxxxxxxxxx ---------MYB59     <---------TOE2(3)                               <xxxxxxxxxxxxxxxxxxxsmallRNA(i2) -------->AtMYB61   <---------------AtSPL8                         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) --------GT1 --------->AHL20(1)                          <----------DOF2          xxxxxxxxxxxxxxxx>smallRNA(s) ->YAB1      <---------AHL20(1)   --------->CCA1(2)     <---------DAG2          <xxxxxxxxxxxxxxxxxxxx   aaccaaaccacaaaatataattgaggaacgaacaagagatggacgaagagaaacatacccttttgaagagtcatcaattgcaaaaataggagtaacgtcg  237300   xxxxxxxxxxxxxxxx>smallRNA(i) --------DEAR3(2)                                                                          <--------- -------DEAR3(1)                    <---------ATHB12         --------->HSFB2a(2)           --------->MYB52(1) ---NtERF2--------->YAB1        <---------AHL20(2)           <---------HSFB2a(2)    --------->TOE2(3) ----DEAR3(1)                   --------->AHL20(2)        <----------DOF2           --------->TOE1(3) xxxxx>smallRNA(fl3)       ------>ZmHOX2a(2)      --------->YAB1             --------->TOE1(3)   ---- xxxsmallRNA(se3)      <---------YAB1           <-----------HVH21            --------->TOE2(3)-------   tcggtgttgttatcagactcggactctgatcgatttaaatcaatagactctgtcataagtctttcagaaattgacaaaacctaaaaccctaaataacagc  237400                                   ------>ZmHOX2a(1)                                  --------->TOE2(3)                                 ------>ZmHOX2a(2)    --------->MYB52(1)          <------ZmHOX2a(2)   ------->GAMYB               <---------ARR14(2)  <---------MYB52(2)           --------->AGP1  <---------MYB46(2)           --------->ARR11(3)  --------->MYB46(3)           <---------ARR11(3)            --------->AHL20(2)  <---------MYB55(2)           --------->ARR14(2)  --------->TOE2(3)                           ------ --GT1                        --------->GLK1(1)    --------->YAB1                             ------- ----->TOE2(3)           --------->MYB52(1)<---------MYB59  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) >GAMYB    --------->GLK1(2)  <---------GLK1(1)  <---------ARR11(3)                <-----------GT1   ctcaactaacgagaatatagaagaaaacaacgagatcctaaactacataactatcttaaactataaattgaacggacaagagttttttcaatcgcaaaaa  237500                                                                             --------->RAP2.6(3)                                                                            --------->MYB52(1) <-----                                                                         <---------ANAC55(2)<--------                                                                     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                              <---------ARR14(2)           --------->RVE1(1)                                               <------ZmHOX2a(1)   ---------->ID1 *TSS     --------->CCA1(1)                                         ---------->DOF2      --------->ARR14(2)  --------->GLK1(1)                                   --------->ETT(2)          <------ZmHOX2a(1)<------------MYB.PH3(1) --->DAG2           <xxxxxxxxxxxxxxxxsmallRNA(i)         ---------->DOF2 --------->ANAC55(2)--------- --->DOF2     ---------->DOF2      <---------ETT(2)     xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)---------   gttctaatctatgagagaaagacttgaaatcgctctgtcgagagaaagaggagagactgaaaaggatttgtcgttcagtaacggctatccaaaaaatctt  237600                                                        <-----------GT1                                                        <---------AHL20(2)                                                    --------->AHL20(2)                                                    <---------AHL20(2)                                                   --------->AHL20(2)                                                <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                               <---------TOE2(3)                                              <---------AHL20(2)                                              --------->AHL20(2)                                            --------->AHL20(2)                                            <---------YAB1                                            <---------AHL20(2)                                           --------->TOE2(3)        ---------->DOF2                  --------->AHL20(1)                                      ---- -----DOF2                    <-----------GT1 --------->YAB1      <---------ANAC58              <---- -ARR11(3)     --------->GLK1(2)         <---------AHL20(1)       <---------ANAC58            <------ >GLK1(2)     <---------GLK1(2)          <---------AHL20(2)<----------DOF2                    <------ >ARR11(3)    --------->ARR14(2)         --------->AHL20(2)<---------DAG2           <-----------RAV1(1)   tttttatgcataaagagattctctagtccatttttctctctaaaatattaatatttaattactttttttcttggtaaatgttttttttgtgggattaaga  237700                                                               <---------YAB1                                                              <----------DOF2                                                            <---------RVE1(1)                                                            <------ZmHOX2a(2)                                                           <---------ARR11(3)                                                           --------->ARR14(3)                                                           <---------ARR14(2)                    --------->YAB1                         --------->ARR14(2)                 --------->YAB1                            --------->ARR11(3)      <-----------GT1                                      <---------ARR14(3)      <---------ARR11(3)                                   --------->AGP1      --------->ARR11(3)                                   <---------AGP1    <---------AHL20(2)                               <-----------GT1 ----->GLK1(2)  <---------YAB1                      <-------TEIL -----GLK1(2) --------->YAB1  --------->AHL20(1)   --------->CCA1(2)       --------->DAG2 ---YAB1 <----------DOF2      <---------AHL20(1)  <---------GLK1(2)       ---------->DOF2       ----- ---TOE2(3)  <---------YAB1  --------->YAB1   ---------->DOF2------>ZmHOX2a(2)                  <----   ttctatattatctttttgataataaaaacaaaaatattagcaaaatagaaaagattcacaagatctttattagaagaaaagtgaatggtatgcataaata  237800                                                                                           ----------         ----------->GT1     <------ZmHOX2a(1)                                             ==========        --------->DAG2      --------->ANAC58                                       --------->CCA1(2)       ---------->DOF2      --------->ANAC46                                      --------->ARR11(1)    --------->AtLEC2        --------->ANAC58           <<<<<<<<<MYB98             <---------ARR14(2)  --------------->AGL15--------->ZAT18               ----------->GT1            ----------->ARR10  =================================================================================================== ---->AHL20(2)      ---------->DOF2                 <---------TOE2(2)       --------->WOX13(1) -----AHL20(2)    <---------YAB1          --------->YAB1            <---------YAB1--------->ARR11(3)   aaatccatgaaaagtaaaccattaatgcacaggacacgagttactcatagttcatatgttaaatggttttcttattagcaattagatatggctctaatat  237900                                                           <----------DOF2                                                           ==========================================                                                           <---------------AGL15                                                           --------------->AGL15                                                          <-----------------AGL2                                                          <-----------------AGL3                  <--                                                       <---------GLK1(2)                          ---                             --------->ARR14(2)      <---------YAB1                               <--                 <---------ZAT18                 <---------GLK1(2)                                ---        ----------->RAV1(1)  <---------ARR14(2) <---------At4g35610                               === ----->AGL15     <----------ID1          <---------------AtSPL3                    --------->AHL20(2) ==========================================================================MADS_MADS<---------AHL20(2) ======MADS_MADS --------->ZAT18         <---------------AtSPL8        --------->YAB1  <---------YAB1   gagcaattggccacataagtggacaaatgcgaattcgaaatgatatgtacagcttctgattcttttaatggaatcatatactaaattttataattcagac  238000                                             <---------YAB1                                            --------->TOE2(3)     <---------YAB1                        --------->YAB1   <---------bZIP60(1)        --------->ARR11(3)   --------->bZIP60(1)        <---------ARR11(3)             <---------ZAT2 =======bZIP_DOF              <-----------ARR10  <---------ICU4 -------O2                    --------->GLK1(2) --------->ICU4 ------>O2              ----------->GT1    <---------ICU4    <---------At4g35610 -------TGA1a    <---------HSFB2a(2)    --------->YAB1    ---------->DOF2<---------YAB1        <----- ------>TGA1a    --------->HSFB2a(2) <----------DOF2     --------->AtMYB61--------->ATHB12   -------- ===============================================bZIP_DOF--------->ANAC46 --------->ICU4  >>>>>>>>>EIN3   tcgtgtcatcatacatgttccacaagatgaaaaatctaactttcatcatcaatattacaccaaagctgctatagaatgattcagatagtatacattgatt  238100  Previous    Next  AGI:  At4g00540.1    Description:  ATMYB3R2/MYB3R-2/PC-MYB2 (MYB DOMAIN PROTEIN 3R2, PUTATIVE C-MYB-LIKE TRANSCRIPTION FACTOR); DNA binding / transcription factor. similar to PC-MYB1 (myb domain protein 3R1), DNA binding / transcription coactivator/ transcription factor [Arabidopsis thaliana] (TAIR:AT4G32730.1); similar to PC-MYB1 (myb domain protein 3R1), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT4G32730.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO44062.1); contains InterPro domain Myb transcription factor (InterPro:IPR015495); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain SANT, DNA-bind Range:  from: 234597    to: 237582    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g00550.1    Description:  DGD2 (digalactosyldiacylglycerol synthase 2); digalactosyldiacylglycerol synthase / transferase, transferring glycosyl groups. Identical to Digalactosyldiacylglycerol synthase 2, chloroplast (DGD2) [Arabidopsis Thaliana] (GB:Q8W1S1;GB:O65264;GB:Q56ZV5;GB:Q8W1S0); similar to DGD1 (DIGALACTOSYL DIACYLGLYCEROL DEFICIENT 1), galactolipid galactosyltransferase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT3G11670.1); similar to Digalactosyldiacylglycerol synthase 2, chloroplast (GB:Q6DW73); contains InterPro domain Glycosyl transferase, group 1; (InterPro:IPR001296) Range:  from: 237967    to: 240500    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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