Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                <---------ICU4                              --------->ATHB12                             --------->ICU4                           --------->YAB1                           <---------ICU4                          <---------YAB1                        <---------ICU4                     --------->YAB1                    <---------YAB1         <---------ZAT6<---------YAB1       --------->ICU4         ----------->GT1--------->YAB1    --------->YAB1          <---------ALFIN1--------->YAB1 ---------YAB1    --------->YAB1         <---------YAB1  --------->ZAT6         --------->ANAC58 ------>YAB1      <---------ICU4     <---------GLK1(2)  >>>>>>>>>>AtWER         --------->ANAC58 >bZIP60(1)      --------->ICU4    <---------TOE2(3)   --------->MYB52(1)   ------>ZmHOX2a(1)       < -bZIP60(1)----------->HVH21 <---------YAB1 <---------YAB1      >>>>>>>>>>>>>>>>>LFY         --------   tcatacttgtactgtgacaattatcatcatcatcattgagattatcatgagtagtactaacagtagtaccactgtctccttcaagcatagacaaataaag  219300              <---------DAG2              <----------DOF2             <---------ANAC58     --------->HSFB2a(1)     <---------ZAT2     <---------HSFB2a(1)                                                >>>>>>>>>>>>>>>>>LFY     <---------At4g35610                                             --------->ARR11(3)     <---------HSFC1(2)            --------->YAB1                    <---------ARR14(2)         -----     --------->HSFC1(2)--------->ANAC58     --------->YAB1           --------->ARR14(2)         -----  --------->LBD16      --------->ANAC58    <-------TEIL              <---------ARR11(3)       <------ ---------HSFB2a(2)<-----------GT1<---------YAB1                    <---------CCA1(2)  ------>ZmHOX2a(1) -->DOF2     <---------ANAC58   --------->YAB1             ------>ZmHOX2a(1)    <-----------GT1 -----   tttccgaagctccttgcttttttgcaacccatatttataatgagattcataactcttcttcctcttcttcatatctccattgtaacatccttctccccac  219400                                                                                           ------>ZmHOX2a(2)                                                                                          <------ZmHOX2a(2)                                                                                          --------->CCA1(2)                                                                                         --------->ARR14(3)      <---------------AGL15                    <---------AHL20(2)                        --------->AGP1     --------->TOE2(3)           --------->ANAC58                                        --------->ARR14(2)     --------->TOE1(3)           --------->ANAC46                                        <---------ARR14(2) ---->ANAC58                     --------->ANAC58---------->DOF2                         <---------AGP1 ---->ANAC58                     --------->ANAC55(2)                     --------->ICU4  <---------ARR14(3) ---ALFIN1                   --------->YAB1  --------->CCA1(2)         ---------->DOF2   <---------ARR11(3) ---->ANAC46          --------------->AtSPL8<---------ARR11(3)      --------->AtLEC2     --------->ARR11(3)   tccaaaaccctaaattagtagaacatagtactcataagtaacccaagatttaaaagaagagaaaatggaaatgcaaagatgagaacaacaagatctgata  219500                                                                                 --------->ZAT6                                                                      <---------At4g35610                                                                      --------->At4g35610                                  <---------TOE1(2)               <---------ANAC55(2)            ----                                  <---------TOE2(2)               <---------ANAC58               ----              ------->TEIL       <-----------RAV1(2)              <---------ANAC58             ------           <---------YAB1     -------->P                          --------->ANAC55(2)       ---------     <-------TEIL        <---------YAB1                           <---------ANAC46          <-------- --------->MYB59         <-----------GT1                         <-----------------------TaNAC69(2)   attttggtacatgatgaatattagattatacttacccaggttgagtaagtgaagacgaccagaagattgcgtagctccattgaacacttcttacagctaa  219600                                                        --------->REM1(1)                                                        --------->ANAC46                                                 --------->At4g35610                                                 <---------ZAT2                                           <---------ZAT2                                  <---------ANAC58                                           --------->At4g35610                             <---------ANAC58                                           --------->ZAT2                                  <---------ANAC46                                <-----------GT1  <---------At4g35610                   --------->ARR11(3) ----->ANAC58                <----------DOF2  <---------At4g35610        ---------->DOF2<---------GLK1(1) ----->ANAC58         <---------MYB52(1)   <---------At4g35610        <-----------HVH21<---------ARR11(3) ---->DOF2--------->TOE2(3)---------->ID1 <-----------RAV1(1)  --------->ANAC46  --------->ARR11(3) >At4g35610       <---------At4g35610     ------>ZmHOX2a(1) <-----------HVH21    <---------ARR14(2) -At4g35610       --------->At4g35610   ----------->RAV1(2)--------->AtMYB61    <---------CCA1(2) <--   agcaagttgttttcttaataagctgttttgtcttttacttcttcctgctgcagcttctacaccatcagccattgtcaaagacatatctagatatcgtgaa  219700                                                             <---------AHL20(1)                                                             --------->AHL20(1)                                                     ----------->GT1                                                    --------->DAG2            <------MYB83                                                   ---------->DOF2           --------->MYB111(1)                                                ------->GAMYB--------->AHL20(2)                                              --------->ANAC58               --------->MYB59                                  ---------->DOF2 ---------->DOF2            <---------AtMYB61                      ---------->DOF2   <------ZmHOX2a(1)    <---------AHL20(2)         ---------->DOF2       --------->YAB1 --------->ANAC58  <---------YAB1<------MYB46(1) <------       <---------AHL20(2)    <---------WOX13(1) --------->AtMYB61  <---------TOE2(3)     <----------DOF2      --------->AHL20(2)   --------->ATHB12*TSS--------->MYB46(3) ---------->DOF2<------------CBF <-- -------ARR14(2)    --------->MYB46(3)------------------------>ANAC81        --------->MYB46(2)<-----   gaactgaatttaaaagtatggaaccaaagtgattgataaagaggagacaaccaaaaggcaaaatttattaaagaagggtttggtattgaagctttatttc  219800                   <----------DOF2       --------->ICU4                        <---------ZAT14                  <---------ANAC58  <------MYB83                               --------->ZAT14              <------------CBF  --------->At4g35610                         <---------ANAC58       <----------DOF2   <----------DOF2 ------>ZmHOX2a(1)            <---------TOE1(3)   <----------DOF2<---------ANAC58  <------MYB46(1)                   <---------TOE2(3)       <------ -----GT1    --------->ATHB12   <---------At4g35610                  ---------->DOF2        <-------- --------DOF2<---------ICU4     <---------ZAT2          ---------->DOF2     <---------ANAC58--------- ------GT1 <----------DOF2      --------->ZAT2 ---------->DOF2    <----------DOF2          --------->ICU4   cttttctttctttctttattgctttctctttctcagcttggtcctgatggaaagtcttaaaagagtgtctttaaagttgagtactgtgtctgaattatga  219900                      --------->ARR11(3)                    <---------YAB1           <---------ANAC58           <---------ANAC58                        <-----------GT1     <---------MYB46(3)                        <----------DOF2                        <------MYB83---    <---------AtMYB61 <---------ARR11(3)     <---------YAB1                           <------MYB46(1)    --------->ALFIN1--------->ICU4       <---------ANAC58                    <---------GLK1(2)   <--- ---YAB1 <---------WRKY18(1)        <---------ANAC58                   <---------ZAT6 ----------->GT1 -ICU4  --------->WRKY12------>ZmHOX2a(2)<---------ANAC58              <-----------RAV1(1)   >>>>>>>> >YAB1 <---------WOX13(1)           <---------ANAC58           ----------->GT1   <---------------AGL15   gagagagtggttgacttgggtcatgatcttggtttttggagtgacttatctttatacaatacatatggtaatagtgttggattctatttggtgaaaacca  220000                                   <---------AHL20(1)    --------->ARR11(3)       ----------->GT1    <---------AHL20(1)     --------->At4g35610    --------->AHL20(1)     <---------At4g35610    <---------ARR11(3) --------->ICU4       ---------->DOF2                                         - -------->GT1        --------->YAB1--------->ARR11(3)                          ------>ZmHOX2a(1)    < ------TOE2(3)      <---------ZAT6 --------->AHL20(1)                       ------>ZmHOX2a(1)       < >MYB2<---------GLK1(2)<---------YAB1  ----------->GT1<-------TEIL      <-----------GT1      --------   aggtaaaatattctctaaattagtgatgatgctgaaaaatattgcaaaaagaaagattcaatatagtttttttgtttcctcctattcatttagtcaaaag  220100                                                                            <-----------GT1                                                                       <----------DOF2                                               <---------YAB1         ------>ZmHOX2a(2)             --------->ZAT14                 --------->CCA1(2)       <------ZmHOX2a(2)      <-----------GT1                <---------YAB1 --------->YAB1  --------->ARR11(3)     <---------YAB1     <---------WOX13(1)  --------->ARR14(2)      --------->ARR14(2) ---------->GT1       <---------MYB46(3)    <---------ARR14(2)      <---------ARR11(3) ------MYB46(1)       --------->ATHB12 <---------AtLEC2    --------->AHL20(2)    <----------DOF2 ------MYB83 <---------ZAT14  ----------->RAV1(1) ------->TEIL      <---------ARR14(2)  <---------GLK1(1) -->DOF2    <---------------AGL15    --------->AtLEC2  --------->AHL20(2)  <-----------GT1  <--------   cttggttattactactatactaggtgattggccaacatcatgcatggatatgaatcataaatttaagaccgatctttttaactcttttggatttgtgttg  220200  Previous    Next  AGI:  At4g00480.1    Description:  ATMYC1 (Arabidopsis thaliana myc-related transcription factor 1); DNA binding / transcription factor. similar to EGL3 (ENHANCER OF GLABRA3), DNA binding [Arabidopsis thaliana] (TAIR:AT1G63650.2); similar to EGL3 (ENHANCER OF GLABRA3), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G63650.1); similar to bHLH33 [Malus x domestica] (GB:ABB84474.1); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) Range:  from: 216944    to: 219743    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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