Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                      --------->AtMYB61                            ----                                                 --------->ANAC46                                ----                                <---------ARR14(2)------>MYB46(1)                               -----                          --------->DAG2        --------->MYB46(3)                              ----- --->MYB52(1)            ---------->DOF2       --------->DEAR3(2)           ----------->GT1     <---- >ANAC55(2)  --------->MYB52(1) --------->ARR14(2)------>MYB83             ----------->GT1      <----   tggttttcagaaacaaaacagagcaaataaagcagaaccaaaacagagaacccaccaaaacagagattacagaaaaatgggaaaatcgagagaaggttac  187200                                                                                            <--------                                                                                            ---------                                                                                            ---------                                                                                         <---------ANAC58             --------->ZAT14              --------->AtMYB61                              <------MYB46(1)             <---------ZAT14            ------>NtERF2                                    <---------ANAC58        --------->At4g35610         --------->ANAC58                                    <---------AtMYB61        <---------At4g35610         --------->ANAC58                                    --------->MYB111(2)      <---------HSFB2a(2)        <------ZmHOX2a(2)                                      --------->MYB46(2) ----->TOE2(3)                  --------->ARR11(3)                                      --------->MYB111(1) ----->TOE1(3)                  <---------ARR11(3)                                   --------->ATHB12 ------>RAV1(2)                --------->YAB1       --------->ANAC46               <-------MYC3 ---->At4g35610               --------->ICU4        --------->ANAC58     ------->GAMYB  <---------MYB46(3) -----ANAC46 <---------ZAT18---------->DOF2 ---------->DOF2 --------->TOE1(2)      ------->MYC3 -----ANAC55(2)   <---------ETT(2)  --------->ANAC46--------->ANAC58  ----------->RAV1(1)<------MYB83   ctgaaattccagcagtacagtagacaagagcaaagatcatgccaccaaaagcccaagcgataccttggattccaacagaagcacacatgtttggtgctct  187300                                                                                                   --                                                                                                   --                                                                            ---------->DOF2      <---                                                                    --------->ARR14(2)      ---------                                                                    <---------ARR14(2)      <--------                                                                  --------->LBD16           <--------                                                                  ------>NtERF2             ---------                                        ---------->DOF2          <---------RAP2.6(2)   <---------At4g35610                                      --------->ANAC58          <---------LBD16        <---------ZAT2 -ZAT18                               --------->ANAC58    --------->At4g35610          --------->ZAT2 >ZAT18                   <---------REM1(1)               <---------At4g35610   --------->ARR11(3)--- >ZAT14   --------->ZAT14 <---------ANAC46     ----------->GT1  --------->RAP2.6(3)    --------->At4g35610   cttaactcccattacagtcaaaacagtgatgtagagaaacaagaaagtagcgataaactcagctattccggctctgtagaaagaccatgagctgagctcg  187400                         <------NtERF2         --------->ZAT14                       --------->ALFIN1        <---------ZAT14                   --------->HSFB2a(2)                      --------->ATERF1(1)    <-------GAMYB                       --------->LBD16                     <---------bZIP60(2)    <---------DEAR3(2)                  <---------LBD16                    --------->ALFIN1       --------->ETT(1)                    <---------LBD16                    <---------AtMYB61      <---------DEAR3(1)             ----------------->AGL1 ------->LBD16     <------ZmHOX2a(1)       <---------DREB2C(2)         <--------P<---------HSFB2a(2) ---->NtERF2    <------NtERF2              <---------DEAR4(1)         <---------ANAC58 ------LBD16    <-----------RAV1(2)        <---------At1g77200        <---------ANAC58 >ZAT2        <---------ANAC58           <-----------HVH21          <---------MYB46(3)            <-- -At4g35610   <---------ANAC58         ------>ZmHOX2a(1)          <---------MYB52(1)           ------ -ZAT2        <---------ANAC46        <---------ANAC58      <---------SPL7<xxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) >At4g35610--------->ALFIN1  <----------DOF2<---------MYB46(3)------->TEIL<---------ANAC58   <------- ------>DEAR3(1)--------->ATERF1(1)   <---------ANAC58<---------At4g35610 <---------ANAC58   --------   ccgggctcgaacagtggcgcaggaggtggctctttgtagtccttgtcggtggactgagccgatgtaccgatgggttgcctctccgggaacttgttagctc  187500                                                                         <---------TOE2(3)                                                                         <---------TOE1(3)       <---                                                                        ---------->DOF2        <-----       <---------ARR11(3)                                               <---------DOF5.7(2)    <-----       --------->ARR11(3)                                           ----------->GT1       <----------DOF2 -------ALFIN1                                                 --------->LBD16      <----------DOF2 --->PCF2           <---------ANAC58                          --------->HSFB2a(2)   <---------DAG2 -- --At4g35610        <---------ANAC58              ---------->ID1 ---------->DOF2<---------ZAT18<----- ->At4g35610    <----------DOF2              <----------DOF2  <---------HSFB2a(2) <---------At4g35610   ccactcgtacatcttcttctttgccttccatttctctccctctccctcttttgttcttctctctccagaaaggttaaagttgtgagctttttctttctcg  187600                                                                  <---------MYB59                                                                  <---------MYB46(2)                                                                 <---------ANAC58                                                                 <---------ANAC58                                                             <------------CBF                                                           <---------AHL20(2)                                                          --------->AHL20(2)      -------->P                                          <---------AHL20(2)   <---------At4g35610                                    <---------AHL20(1)   --------->At4g35610                                 --------->YAB1<---------TOE2(3)        ------- ------ANAC46                                         <---------AHL20(2)                      <------ ----ANAC58                *TSS                       <---------YAB1--------->MYB52(1)<---------YAB1 ----ANAC46   --------->ALFIN1                       <---------AHL20(1)             <---------AHL20(2) ------->ALFIN1 <---------AtMYB61                    --------->AHL20(1)             --------->AHL20(2) ----ANAC58 --------->ALFIN1  <-----------TBP        --------->AHL20(2)        <---------ATHB12<-----   tgtgtagctaccaagtgtgtggtcgagacttcatttatagagaacaacgatagaatataataaaattgcctaacgtttccaaacatttatttttagttat  187700                                                                             ------>MYB46(1)                                                                             ------>MYB83                     <---------ANAC55(2)                                   <---------MYB111(1)                     <---------ANAC46                                      <---------MYB59         <---------AHL20(2)                                               --------->ANAC46         --------->AHL20(2)                                               --------->ANAC55(2)    --------->AHL20(2)                                           <---------ATHB12 -->ATHB12          <---------TOE2(3)                        --------->MYB46(3) ---ICU4 --------->AHL20(1)        <----------DOF2       <---------KAN4(2)<---------ANAC55(2) -------CBF   ----------->GT1   <-----------GT1         --------->YAB1    --------->ANAC55(1)   tgctaagaaaataaaatagtataacgtatagttttttctttatttcaaatttcaactagaataaccaatagttaacacctaatttcaaggcttaggcaaa  187800                                     --------->TOE2(3)       <---------MYB59                    -----                                     <---------MYB59      --------->ARR14(2)   <---------AHL20(2)                         ------>MYB46(1)             --------->MYB52(1)        --------->AHL20(2)   -                         ------>MYB83--------->TOE1(3)    <---------ARR14(2)  --------->AHL20(2)<----   taaactgagagtcaaataaactgaaccaaatgtactaaacctaaatgaaaaaaaaaaacagaaccgaattgaatcaacaatttaaaaattgttgaataga  187900                                                  --------->AHL20(2)                                                  --------->AHL20(1)                                                  <---------AHL20(1)                                                <---------AHL20(1)                  --------->AHL20(2)                                         ------>MYB46(1)                            <---------AHL20(2)                                         ------>MYB83                               <---------AHL20(1)             --------->YAB1              --------->MYB52(1)                         --------->AHL20(1)          --------->YAB1               <---------MYB111(2)                         --------->AHL20(2)         <---------YAB1                <---------MYB46(2)                          <---------AHL20(2)      <---------AHL20(2)               <---------MYB59                         <---------YAB1     --------->AHL20(2)                <---------MYB111(1)                     <---------AHL20(2) <---------AHL20(2)                   <---------ANAC55(2)     ------>ZmHOX2a(2)--------->AHL20(2) --------->AHL20(2)              <---------ICU4 <---------AHL20(2)  --------->CCA1(1) <---------AHL20(1)              --------------->AtSPL8     --------->ARR11(3)--------->AHL20(1) ---->ARR11(3)                   <---------------AtSPL8     <---------ARR11(3)<---------AHL20(1)<---- -------->AHL20(2)               <---------------AtSPL3 <---------At4g35610   --------->AHL20(2)----- -----ARR11(3)               --------->AHL20(2) --------->AHL20(1)  --------->RVE1(1)          ------   tattaaattttataatcaaaataaccaaaaatgaattagtacctaactaaaatattttagatgatctaaaatatccaaaatataattttattttcaaaaa  188000                                                                                             <-------                                                                                         --------->AHL20(2)                                        <---------AHL20(1)                       --------->ATHB51                                        --------->AHL20(1)                       --------->ATHB12                                       --------->AHL20(2)                        <--------ATHB1                                     --------->AHL20(2)                          -------->HAHB4                             --------->AHL20(2)                                  <---------ICU4                            --------->ARR11(3)                                  <---------AHL20(2)                            <---------AHL20(1)        <-----------GT1           <---------ATHB51                            --------->AHL20(1) <---------AHL20(2)               <---------YAB1          --------------->AGL15  --------->AHL20(2)----------->GT1              --------->ICU4       <-----------GT1      <---------ARR11(3)--------->AHL20(2)                --------->AHL20(2)--- -----AHL20(1)         --------->AHL20(2) --------->AHL20(1)                  --------->YAB1 -------- ---->AHL20(1)         <---------AHL20(2) <---------AHL20(1)                --------->AHL20(2)    <-- --->YAB1 <---------------AGL15  <---------AHL20(2)--------->YAB1 --------->AHL20(2)     --------->ICU4   tattagttatttctatacttagtaattaaaaatatttaaaaatatatattaaatagtaacaatattcaaaaaatatcaaaaaataattgaaatatttaaa  188100  Previous    Next  AGI:  At4g00430.1    Description:  TMP-C (PLASMA MEMBRANE INTRINSIC PROTEIN 1;4); water channel. Identical to Probable aquaporin PIP1-4 (PIP1.4) [Arabidopsis Thaliana] (GB:Q39196;GB:O23059;GB:O23829); similar to PIP1C (PLASMA MEMBRANE INTRINSIC PROTEIN 1,3), water channel [Arabidopsis thaliana] (TAIR:AT1G01620.1); similar to trans-membrane water channel protein [Brassica juncea] (GB:ABO71659.2); contains InterPro domain Aquaporin; (InterPro:IPR012269); contains InterPro domain Major intrinsic protein; (InterPro:IPR000425) Range:  from: 185450    to: 187627    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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