Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                          <---------DAG2         <-----      <---------At4g35610        <---------ALFIN1                       <----------DOF2        ------ --------GT1                    --------->ZAT14                --------->ALFIN1              -------- >AHL20(2)                      <---------ZAT14              <---------ANAC46             <---------ANAC58 >AHL20(1)                      <---------ZAT18           --------->DEAR3(1)              <---------ANAC46 -AHL20(2)  ------>ZmHOX2a(1) --------->ANAC46         <---------WRKY38(1)                <---------ANAC58   aactcttcatcttcctcactcactctctctctactccactcttcatcaagcgttgagtcatcgccgtgttgttccttttccttccctctctagcgtaagc  167600                                                                                       <----------DOF2                                                                              <----------DOF2   <---------GLK1(1)                                                     <---------ANAC58   --------->GLK1(1)                                                     <---------ANAC46  <---------GLK1(2)                                                      --------->ANAC55(2) ----At4g35610                                       <-----------GT1     <---------ANAC58 --->At4g35610             --------->At5g28300  ------->TEIL             <---------ANAC55(2) ->SPL7                 <---------At5g28300 <---------TOE2(3)        ------->TEIL<-----------GT1   tccagatttcttctattctctgttttcacagtgaaatctctcgtttaatgaattttttcgattcccctatgcatttcgtgatttaacgcctttactcact  167700                                                <-----------TGA1              <---------AHL20(2)                <-----------HVH21            <---------AHL20(2)                 <---------ANAC58           <---------AHL20(2)              <---------ANAC58           --------->AHL20(2)              <---------ANAC58           --------->AHL20(1)            --------->AtLEC2           <---------AHL20(1)         <---------YAB1           --------->ARR11(3)      ------>ZmHOX2a(1)          ------------>CBF                 <-----           <---------ARR11(3)     <---------ANAC58            <---------------AGL15        <---------CCA1(2)          --------->AHL20(2)      <---------ANAC58          --------->At4g35610            ----------        --------->AHL20(2)   <------MYB83<---------YAB1     <---------At4g35610          <---------ANAC58  --------->ANAC55(2)        <------MYB46(1)   --------->ANAC46                          <---------ANAC58  <---------ANAC55(2)     <---------MYB52(1)   <---------ANAC58                       <----------DOF2   tgttacttaaaaatatatttttgatttcgctaggttccttatcatgcatgcgtcactctcttagctcaattttgtaaatgctgtatcactttcgtctctt  167800                                                                       <---------HSFB2a(2)                                                                       --------->HSFB2a(2)                                           --------->STY1(1)         <---------ANAC46                                         <---------ANAC58         --------->GLK1(1)                                         <---------ANAC46     <---------TOE1(2)            ------------>CBF             <---------ANAC58   ------->PIF5 <----------DOF2                    <---------MYB46(3)      <-------PIF5 <---------DAG2                     <-----------RAV1(1)  <---------ANAC58 -----DOF2<---------ZAT6    <XXXXXXXXXXXXXXXXXXXMIR773B* <---------ANAC58   <------------CBF  <------ >ID1>>>>>>>>>>>>>>>>>LFY   <---------MYB46(3)  <---------GLK1(1)<------------CBF     <----------DOF2   ttgctttatccagtgtcaattttgttttgtttgttaagttgttgcctagggtttctcttgctcgtgggattgcctagaaattgagtctcttttgggcctt  167900                                                    <-------TEIL                                                    --------->SPL7                                            --------->DAG2                         <------ZmHOX2a(2)                                           ---------->DOF2                         ==================       <<<<<<<<<TBF1                   --------->LBD16             <---------At4g35610   ---------->ID1             <----------DOF2     <---------ARR14(2)              --------->ARR11(3) ----DOF2              <-----------GT1<-----------RAV1(2)          --------->At4g35610    <----------   attttgttcttcttctctgtttttgtaacattctttttctccaggtaaagcaggtacgatggacatttctgatgaagagtctgagatcagcgagtcagag  168000                                                                                    <----------DOF2                            <----------DOF2                                        <---------DAG2                        <---------ALFIN1                                    <---------At4g35610                       --------->MYB46(3)                                   --------->At4g35610                      ------>MYB46(1)                                 <---------DEAR3(2)                      -------->P --------->ANAC46                     <---------ATERF1(1)                  --------->ANAC58                                   <---------RAP2.6(2)                  --------->ANAC46                                   <---------DEAR3(1)   <------ZmHOX2a(1)  ------>MYB83                                  --------->RAP2.6(3) <---------TOE2(3)--------->ANAC58                                  <---------ORA47(1)       -------- =========HOX2a_HOX2a --------->SPL7                            <---------------AtSPL3 <---------ANAC46 -HVH21<---------ARR14(2)  <---------DAG2              --------->ALFIN1   <-----------RAV1(2)--------   attgaggagtattctaaaacaccctaccaccttttacgcagtgagacttactacaaggtgaaggtgaatggacggctcagatgccccttttgtgtaggca  168100                                     --------->ANAC58                                    <-------MYC2                                    ------->MYC2                                    <-------PIF5                                    ------->PIF5                                    <-------MYC4                                    ------->PIF4                                    ------->MYC3                                    <-------MYC3                                    <-------PIF4                                  ------->TEIL                               --------->AtLEC2                                                     <                             <---------AtLEC2                    ----------->RAV1(1)        ---------   --------->ANAC58          <---------ANAC58                    ------>NtERF2              <--------   --------->ANAC58          <---------ANAC46             <---------ARR14(2)    <---------HSFB2a(2)<- ->ANAC58                    <---------ANAC58             --------->ARR14(2)    --------->HSFB2a(2)<- ->ANAC58            --------->ANAC46--------->ANAC58   --------->HSFB2a(1) <----------DOF2<---------ATHB12   agaagaagcaagattacaagtacaaggagttgcatgcacatgctactggtgtttccaaaggttctgccaccagaagtgctttacagaagtctaatcatct  168200                                                               <---------MYB46(3)                                                              <--------P                                                             <-------GAMYB                                                        <---------SPL7                               <---------MYB46(3)      --------->DEAR3(1)                             <---------ANAC58        ------>NtERF2    <---------At4g35610      <---------ANAC58       --------->ANAC46    --------->At4g35610      <---------ANAC46       --------->ANAC58 ----------DOF2          ------>ZmHOX2a(2)          --------->ANAC58    ------>ZmHOX2a(1)      ------ >YAB1                 <---------ARR11(3)         <---------ALFIN1   ------>ZmHOX2a(1)         <----- -ICU4                 --------->ARR11(3)--------->ARR14(2)  <---------MYB52(1)  --------->ANAC46  -- --------ANAC58       --------->YAB1     <---------ARR14(2) --------->LBD16 <---------MYB52(1)------>MYB46(1) --------ANAC58     <---------KAN4(2)    <---------GLK1(2)<---------LBD16  <-----------HVH21  ------>MYB83   tgctttagctaagtttttagagaatgatcttgctggttatgcagaacctcttccacgccctccggttgttcctcctctgttagacgagactgaaccaaat  168300                                                                                                   --                                                                                               ------                                                                    --------->HSFC1(2)         <-----                                                                    <---------HSFC1(2)         ------                                                     --------->MYB52(1)                        <-----                                                ---------->DOF2     <---------HSFB2a(1)        <----- --->ARR14(2)                               <----------DOF2         --------->HSFB2a(1)     --------- ----ARR14(2)                          <-----------GT1     ----------->HVH21--------------->AGL15  <- ---->ZmHOX2a(1)                <---------MYB46(3)  --------->ARR11(1)   <XXXXXXXXXXXXXXXXXXXXMIR862-3P   cctcataacgtctatgtctggccatggatggggattgttgttaaccctttgaaagaaacggatgacaaggagcttctacttgattcagtatattggctgc  168400                                                                                                    -   <----------DOF2                                        <-----------RAV1(1)                   <---- ------->ARR14(2)                                         <---------MYB46(3)                  ------- --->At4g35610                                       <-------TEIL<-------GAMYB              <-------- ----ZAT14                                          --------->ARR14(1)                      <-------- --->ZAT14                                          --------->CCA1(2)                       <-------- ----At4g35610                                     --------->ARR11(1)                     <---------ZAT14 -NtERF2       --------->ANAC58                    --------->ARR14(2)                     --------->ZAT14 >At4g35610    --------->ANAC58    <----------DOF2 <---------GLK1(2)                --------->At5g28300 --------ARR14(2)   <-------GAMYB <---------DAG2   <---------ARR14(2)          ----------->HVH21<----   agaccctttccaaattcaagcctgttgaagtgaatgccttttgggtcgaacaagattcgattgttggggttattgctaagtttgacagtgactggagtgg  168500  Previous    Next  AGI:  At4g00380.1    Description:  XH/XS domain-containing protein / XS zinc finger domain-containing protein. similar to XH/XS domain-containing protein / XS zinc finger domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G80790.1); similar to XH/XS domain-containing protein / XS zinc finger domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G15910.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64047.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83544.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64044.1); contains InterPro domain Region of unknown function XH (InterPro:IPR005379); contains InterPro domain Region of Range:  from: 167959    to: 170974    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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