Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                            <-------TEIL                                                         --------->ARR14(1)                                                        --------->ARR11(1)                            --------->ZAT6              <---------GLK1(2)                         <------ZmHOX2a(1)            ----------->ARR10                 <------ZmHOX2a(1)                    --------->ATHB12                XXXXXXXXXXXXXXXXXXXX>MIR860   --------->GLK1(2)             --------->ANAC58                   --------->ANAC58                  --------->ARR11(3)             --------->ANAC58                   --------->ANAC46                  <XXXXXXXXXXXXXXXXXX  --------->ANAC46 <---------YAB1               --------->ANAC58               <---------ANAC55(2)   caacacaaaaccggcaagaacatcataggaacactcatttgaaaaaacccaaggaatagattcgactatgtaaacacaaacaagtatctaggaaaatcaa  139500                                                                                               ------                                                                   --------->ARR14(2)        --------                                                     <---------ZAT18                       --------->ARR14(2)                                                     --------->ZAT14                       <---------ARR14(2)                             ---------->DOF2       <---------At4g35610                   --------->LBD16    --------->ANAC55(2)  --------->TOE2(3)         --------->At4g35610                --------->SPL7    --------->ANAC58     --------->TOE1(3)--------->ARR11(3)       <---------GLK1(2)----------->HVH21    --------->ANAC58  <-----------GT1     <---------GLK1(2)      --------->LBD16--------->ARR14(2) XXMIR781       --------->GLK1(2)         <---------ARR11(3)   <---------LBD16  <---------ARR14(2)   aaacataagtaatagaagaatatgttaccttcaaagaagaacgagattttctcagcgctctcaaacccgggttctcaaacccgaaccggaccggaaccgg  139600                                                             <---------ZAT18                                                         --------->DAG2                                                   ---------->DOF2                                             <---------ICU4  --------->ZAT18                --------->MYB52(1)           <---------AHL20(2)       <---------DAG2 --->LBD16 <-----------GT1   ---------->DOF2 --------->AHL20(2)       <----------DOF2           <---- ------->AtSPL3----------->HVH21  --------->DEAR3(1)    ---------->DOF2  ---------->ID1       ------>ZmHOX2a(1)   accattacccatttaacccgacggtttacccataagccgagccctaattttttcaaagaaaagggccctaaacttttcgtcttctcgcttcccttcctct  139700                                                              --------->bZIP60(1)                                                              <---------bZIP60(1)                                                            --------->YAB1                                                           <---------ATHB12        <---------ANAC55(2)                                                           --------->ICU4      --------->YAB1                                                       ------------>CBF      <---------WOX13(1)                    --------->ZAT6              <------MYB83<---------ICU4  <------------CBF -----CCA1(2)    <---------MYB52(1)             <------MYB46(1)            --------->ATHB12      <---   atctcgtcttctcgcttcccttactctatcccatagaaaaaccctgaatttggtttggccaatgatgtcaaaactcttcattgatacttaagaaagtttt  139800                                                                                               <-----                                 <--------P                    <---------ZAT14           <---------ANAC55(2)                               <------MYB83                    <---------ZAT18           --------->ANAC55(2) <------------CBF              <------MYB46(1)                 --------->ZAT18         <-----------GT1 --------GT1           <-----------------AG               <---------ANAC46          <---------ICU4   ctccattgttcttcttatggtctcattcacatttggtaagtctcttcaacgattttggttttgtgagcacttacttcttcttacaagaattacatgtctt  139900                                                                                                   --                                                                                                   <-                                                                                              -------                                                                   --------->HSFC1(1)         -------                 <---------AGP1                                    <---------HSFC1(1)         -------         <-----------GT1                                           <---------HSFB2a(2)        -------  <---------TOE1(3)                                                >>>>>>>ZML2     <---------MYB46(3)  <---------TOE2(3)------>ZmHOX2a(2)                               --------->HSFB2a(2) <-----------GT1 <-----------RAV1(2)       <-----------HVH21              <---------YAB1         <---------At4g35610< -----DOF2 <------------AtMYB77               ---------->DOF2 <---------MYB46(3) --------->At4g35610-   tgttcaggttgtaactgttgatctgtttctgtcacaaaatgggttcgaaaaagaagtgttttgatggttctagagatggaatcagcggtttaccagacgc  140000                                                       <---------ANAC58                                                       <---------ANAC58                                                     <---------MYB52(1)                                                ------->GAMYB                                                --------->MYB55(1)         <---------ANAC55(2)                   <---------MYB111(2)         --------->ANAC55(2)                   <---------MYB52(2)     <-----------HVH21                         --------->MYB46(3) ------->ICU4                               --------->REM1(1) ---------->DOF2 --------ATHB12                           <----------DOF2   --------------->AGL15   <----------DOF2 -->ANAC58                              --------->At4g35610 <---------------AGL15  <---------ANAC58 -->ANAC46                           <---------At4g35610   ----------------->AG    <---------ANAC46 > -->ANAC58       <---------ICU4      --------->At4g35610   ----------------->AGL1  <---------ANAC58 < -->RAP2.6(2)  <-----------GT1  <---------TOE2(3)--------->MYB52(1)            <---------ANAC58  ---- --------ATHB1--------->YAB1 <---------MYB52(2)<---------MYB55(2)              <---------ANAC58  ---- -------->ATHB12<---------YAB1 ---------->DOF2 <---------MYB46(2)          <----------DOF2    <------   aatgatttgtcacatattatcatttcttccaactaaagtagctgcttcaactaccgttcttgccaaaagatggaagcctttgcttgcttttatgccaaac  140100                             ------>ZmHOX2a(1)                          ===============================HOX2a_HOX2a                          <------ZmHOX2a(2)                                     <---------ANAC46                         --------->ARR14(2)                                <---------ANAC58   <----------DOF2<---------ANAC58   <---------ANAC46           ---------->DOF2 <---------ANAC58 >>>>>>>>WRKY18   <---------ANAC58   <---------ANAC58         --------->HSFB2a(2) ---------WRKY18(1) <---------MYB52(1)                        <---------YAB1    <---------ANAC58  <-- ----->TOE1(3) ------>ZmHOX2a(1)     <---------ANAC58         <---------HSFB2a(2)    <---------ARR14(2) ----->TOE2(3) ==================HOX2a_HOX2a         ---------->DOF2       <---------ANAC58      <--- ---ALFIN1 ------->TEIL  <---------ARR14(2)       <------ZmHOX2a(1)      <---------YAB1          <---   cttgactttgatgaatccttccgtttcgatcctcgaatgacttgtgaagagaggagaaagggttctgaaagttttatgcttgtcgtggatagtgtattgg  140200                                                                                      ---------->DOF2                                                                                    <---------MYB59                                                                                   <---------ANAC55(2)                                                                           <---------AtLEC2         -                                                    --------->ALFIN1    <----------DOF2            --                                          <---------ANAC55(1)          <---------ANAC58            <-                                          <---------ANAC46             <---------ANAC46           <-- --------DOF2                          <---------MYB52(1)              <---------ANAC58--------->DAG2 ------ANAC58                         --------->TOE2(3)               <---------MYB46(3)  --------->ALFIN1 ------ANAC58        <---------ANAC46 --------->TOE1(3)           <---------DEAR3(1)--------->TOE2(3)   ctttgcaagcggaagcgaatgctacgttgaacaaattctacgttaagtgtgaaggtgttgagcaaaactcggtgcttgaatggatacctaaagtgttgaa  140300                                                                                                 ----                                                                                               ------                                                                                     <----------DOF2                           ------>ZmHOX2a(2)                                        ------>ZmHOX2a(2)                          <------ZmHOX2a(2)                                        <------ZmHOX2a(2)     --------->ALFIN1    --------->ARR11(3)                                       --------->AGP1 <---   <---------ANAC58      <---------ARR14(2)                          =====================HOX2a_HOX2a   <---------ANAC58      --------->ARR14(2)                          ======================HOX2a_HOX2a   <---------ANAC46      <---------ARR11(3)                          ------>ZmHOX2a(1)         ------ -------->ALFIN1        <---------At4g35610                      <-----------GT1  <---------ARR11(3) ----->MYC3        ------>ZmHOX2a(2)      <---------ARR14(2)    <-----------GT1   --------->ARR11(3) ------MYC3<---------ARR11(3)             --------->ARR14(2)<---------DAG2       --------->GLK1(1) -------O2 --------->ARR11(3)         <---------LBD16       <----------DOF2      <---------GLK1(1)   acgtggtgtgttagatattgatctacagatcccttcgtctcgcggttttggttccaactcgactttttatcctctaccttcagagatctttgtgagcaag  140400  Previous    Next  AGI:  At4g00320.1    Description:  F-box family protein. Identical to Putative F-box/LRR-repeat protein At4g00320 [Arabidopsis Thaliana] (GB:P0C2G6;GB:O23070); similar to F-box family protein-related [Arabidopsis thaliana] (TAIR:AT5G41830.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63564.1); contains InterPro domain Leucine-rich repeat 2 (InterPro:IPR013101); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain FBD-like (InterPro:IPR006566) Range:  from: 139939    to: 141643    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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