Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                           --------->YAB1                                                                         <--------HAHB4                                                                         --------->ATHB12                                                                        <---------YAB1                                                                        --------->ICU4                                                                        <---------ATHB12                                                                      --------->YAB1                                                                 <---------At5g28300                                                                <-----------GT1               --------->AHL20(2)           --------->ANAC58 <---------ICU4<---------YAB1 <---------ANAC58               --------->YAB1               --------->ANAC46<---------AHL20(2)            <---------ANAC46           --------->REM1(1)                --------->ANAC58--------->AHL20(2)<---------TOE2(3) ---------ARR14(2)                 <---------ANAC46        <---------YAB1<---------ICU4   <---------ANAC58 -------->ARR14(2)         <---------WOX13(1)           <---------MYB52(1)--------->TOE2(3)   caaatacttggctacaataaaaaaaactgatagatttgtgtgaaaaacgctattttcagttattaattactgtaatcattaatgttgaaatgtcgttttc  126100                                                        <---------AHL20(2)                                                        <---------AHL20(1)                                                        --------->AHL20(2)                                                 --------->ZAT6                                              --------->WRKY38(1)                                  --------->HSFB2a(2)   --------->AHL20(1)                                  <---------HSFB2a(2)--------->YAB1                                 ======================================MADS_MADS                                 ----------------->AGL3<---------------AGL15        <----------DOF2                                 ----------------->AGL2--------->AHL20(2)       <---------GLK1(1)            <---------YAB1  <---------TOE2(3) --------->WRKY45                  --------->GLK1(1)   -    <---------TOE1(3)     <---------AHL20(2)<----------DOF2             ---------->DOF2             <   catcttatggttttattcttgtggagaattaatgttccaaaaacagctttgactctaataaattgggaaatataaaaaggagatttctttctaaatccaa  126200                                                                                                    -                                                                                                    <                                                                                              -------                                                                                              <------                                             <---------ANAC58                        <---------HSFB2a(2)                                             <---------ANAC58                        --------->HSFB2a(2)                                           <---------ARR11(3)                        <---------LBD16<                <---------YAB1             --------->ARR11(3)                 --------->AHL20(2)    <                <---------TOE2(3)         <---------CCA1(2)                   <---------AHL20(2)    <          --------->AHL20(2)             <---------AHL20(1)                   <---------AHL20(1)    -       <-----------GT1                   --------->AHL20(1)                   --------->AHL20(1)   <- <---------AHL20(2)                      --------->ARR11(3)                  <---------AHL20(2)    -- -------->AHL20(2)                 --------->YAB1    <---------AHL20(2)      --------->AHL20(2)  ---- ---------AHL20(2)    <---------YAB1     <---------ARR11(3)              --------->ICU4     ---------   aattttttttaactaaataagattattttagacatcatcaaaatatatcttgtcttaaatttgagttaagttgtcttaattaaatttctcggagtagtgt  126300 -------->YAB1 ---------ICU4 ---->GT1                                                                            <---------AHL20(2) ---ZAT6                                                                             --------->AHL20(2) --------ATHB1                                                                   <---------YAB1 ---------AHL20(2)                                                             ----------->GT1 ---------AHL20(1)                                                             --------->YAB1 -------->AHL20(2)      ----------->HVH21                                    <------------CBF --------ATHB51       <------------CBF                                     <---------YAB1 ------->ICU4      ------------>CBF              <----------DOF2          <---------AHL20(2) ----->YAB1       <-----------GT1                <---------DAG2          --------->YAB1 -->GT1   ----------->GT1                       <---------DAG2         <---------GLK1(2)   --------->AHL20(2)   aataattttcatatgtaaattaacaattgacagcatcgagacaaaccttgcctttttggcattagataatacagattataattgtaattaaaaaaaaata  126400                                              --------->AtMYB61                                              <---------ALFIN1                                             --------->MYB46(3)                                           --------->AtMYB61                                        <---------ALFIN1                                        --------->ANAC46                                       ------>MYB46(1)                           ------------>CBF<---------ALFIN1                    ---------->DOF2    ------>MYB83             --------->ANAC58                  <---------AHL20(2)   -------->P <-----------HVH21                               ---                  --------->YAB1      ----------->RAV1(1)       --------->ANAC58                 <---                  --------->AHL20(2) --------->AtMYB61        ---------->DOF2                  ------            --------->TOE2(3)       --------->MYB46(3)    ------->GAMYB                      --------   aacttggtttcatttcttaataaaaagccttcaatctcaccaacaccaccactgtcacaactcacaaagcaaaaaaaaaactagtcttcttctatgtcaa  126500                           <---------ANAC58                           <---------ANAC58            <---------ARR11(3) ------>YAB1--------->ARR11(3)                                      --------->At4g35610 ------ATHB12           <----------DOF2                    <<<<<<<<<TBF1 --->WOX13(1)<------ZmHOX2a(2) <----------ID1     <----------DOF2   <---------At4g35610 ---->CBF  --------->GLK1(1)  --------->SPL7 <-----------GT1  <<<<<<<<<TBF1     <-----------HVH21   tcagagccatgggagatcaaaaaacactttcttacgacaaatctaataaacccttttattcttcttcttcatctccatgttccttcacagccatcgtcgt  126600                                                                                                  <--                 <---------ARR11(3)                                                        <---------SPL7                 --------->ARR11(3)                                                       --------->TOE1(1)                <---------CCA1(2)            <----------DOF2            --------->ARR14(2)--------->TOE2(1)      ------>ZmHOX2a(2)                  <---------CCA1(2)    <-----------GT1            ------>ZmHOX2a(1)    --------->ARR11(3)                <-------TEIL         --------->ARR14(2) <---------ALFIN1   <---    <---------ARR11(3)       XXXXXXXXXXXXXXXXXXXXX>MIR777  <---------ARR14(2)--------->LBD16    -----   cttcttgatcttcgtctcatatctcttatactcattcagtttcatctcttttctaaacccatattcaccttctaaatcccccaattctctcctcgtaccc  126700                                                                                         --------->HSFC1(2)                                                                                         <---------HSFC1(2)                                                                               --------->ARR11(3)                                                                               <---------ARR11(3)                                         <---------ZAT2                        --------->AGP1                                         --------->At4g35610                   --------->ARR14(2)                        --------->At4g35610                                    <---------ARR14(2)                 --------->WRKY18(1)     <---------At4g35610         --------->LBD16     --------->HSFB2a(1)               ----------->GT1           --------->GLK1(1)           ------>NtERF2       <---------HSFB2a(1)              <---------MYB46(3)     --------->ANAC46                <------NtERF2      --------->ANAC58           <-----------HVH21       --------->MYB52(1)               --------->DEAR3(1)  --------->ANAC58    <-----------HVH21   ----------->RAV1(2)                        <---------LBD16-------------------   --------->ANAC46   <---------ALFIN1   --------->ZAT2       <---------GLK1(2)<---------AGP1 -------MYB52(1)<-----------HVH21--------->MYB46(3)           <---------ARR14(2) ------>ZmHOX2a(2) --------HVH21<---------DEAR3(2) <---------MYB52(2)           --------->ARR14(2)<------ZmHOX2a(2) ---->ANAC46 --------->ETT(1) <------ZmHOX2a(1)           <---------LBD16     <---------CCA1(2)   gttatccgtctcgggtcgggtcaaacacctgaggaacaaacggagctcaaacacatagtcttcggaatcgccgcgtcttcagatctatggaagcatcgta  126800                                                <---------MYB52(1)                                               <---------SPL7                                              <---------ANAC46                                             --------->RAP2.3(1)                                             --------->DEAR4(2)                                             <------NtERF2                                             --------->ATERF1(1)                                            <---------RAP2.3(1)                                            <---------ATERF1(1)                                            --------->ABI4(2)    <---------ANAC55(2)                    --------->DEAR3(1)    --------->ANAC55(2)                   --------->ATERF1(1)    ----------->GT1                     <---------DEAR3(1)                     <---------ARR14(2)    <---------ANAC55(1)             <---------YAB1                             --------->ARR14(2)    <---------ANAC46         ------->GAMYB--------->RAP2.3(1)                 <---------MYB52(1)    <---------ANAC58       >>>>>>>>>MYB98 <---------ABI4(2)               ------>NtERF2    <---------ANAC58      ------>MYB83--------->MYB52(1)                 <---------ALFIN1     <------ <---------ARR14(2)       --------->MYB52(1)------>NtERF2              ------->GAMYB          ======= --------->GLK1(2)        ------>MYB46(1)<---------ATERF1(1)          --------->ANAC46      --------- --------->ARR14(2)      --------->MYB55(1)<---------DEAR3(1)         --------->MYB46(3) <---------At4g35610 -->WRI1                <---------MYB59------->TEIL               <---------ATHB12 <<<<<<<<<TBF1   gagaatacgtgaaaacatggtggaaacctaacggagtcatgaacggcgccgtttggctcgacaaacccatcaacgacaccgtttcttcttcatcagcttt  126900                       ==========================MYC_MYB                       --------->bZIP60(2)                       --------->TGA1a                       ==========================MYC_MYB                       --------->ANAC58              <-----------HVH21                       <---------O2                 ------->GAMYB                       --------->ANAC46          --------->MYB52(1)       <------ZmHOX2a(2)                     <---------ALFIN1         --------->TOE2(3)           ===========================                  <---------ETT(1)            --------->TOE1(3)          <---------ARR11(3)                  ----------->HVH21          ----------------->AG        --------->ARR11(3)    <-----          <-----------ARR10                  ----------------->AGL1     <------ZmHOX2a(1)   ---------          --------->GLK1(2)                 <---------DOF5.7(2)      --------->YAB1 <---------ANAC58     <------ZmHOX2a(2) --------->ANAC58     <---------At5g28300 --------->At4g35610 <---------ANAC58   <---------At4g35610 --------->O2         <-----------------AGL1  <------ZmHOX2a(2)  <-----------HVH21   --------->At4g35610 <---------TGA1a    --------->DOF5.7(2)<------ZmHOX2a(2)    --------->GLK1(2) ----DOF2<---------GLK1(2)                <---------MYB52(1) ==================HOX2a_HOX2a <---------HSFB2a(2) ================================bZIP_DOF<-------GAMYB      <---------ARR14(2)    <---------ARR14(2) >At4g35610       --------->ANAC46<---------------AtSPL3    --------->ARR14(2)   <---------GLK1(2)---   gcctcagatcagaatctcttccgacacgtcgagtttcaagtaccgttaccgtaacggtcacagatcagcgatcaggatcacgagaatcgtgtccgagacg  127000  Previous    Next  AGI:  At4g00300.1    Description:  fringe-related protein. similar to fringe-related protein [Arabidopsis thaliana] (TAIR:AT1G01570.1); similar to hypothetical protein [Trifolium pratense] (GB:BAE71200.1); contains InterPro domain Protein of unknown function DUF604 (InterPro:IPR006740) Range:  from: 126509    to: 130331    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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