Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                           <---------HSFB2a(2)                                                                         --------->HSFB2a(2)                                               ----------->RAV1(2)       <---------------------WRI1                                            -------->P          --------->GLK1(2)--------->YAB1                                          ------->GAMYB         --------->ARR11(3)                <-- <---------ATHB12                        --------->MYB46(3)     <---------ARR11(3)              ----- ------->WOX13(1)    ------>ZmHOX2a(1)   <---------MYB46(2)     <---------ARR14(2)              ----- >TEIL           <---------ARR14(2)      <---------MYB52(2)     --------->ARR14(2)    --------->AtLEC2   ccaatcaattttgggattgaatcctgtcttagctctgtaatcaactaacccctgagcaatttcgaaaatctggttttagaaaatcacaatgcaaaaccaa  118200                                                                                ------->GAMYB                                                                             --------->MYB52(1)                                                                            <---------WRKY12                                                                    <---------HSFB2a(2)                                                                   ------>ZmHOX2a(2)                                                                   <---------LBD16                                                                  --------->ARR14(1)                                                                  --------->CCA1(2)                                                                  <------ZmHOX2a(2)                                                                 --------->AGP1<---------DEAR3(1)                                                                 --------->ARR14(2)                                                                 <---------GLK1(2)                                                                 --------->ARR11(3)                                                              <---------HSFB2a(2)                                                              --------->HSFB2a(2)<---------LBD16                                                             ----------------->AGL1                                                             <-----------------AGL1    ------>ZmHOX2a(2)                                                         --------->TOE1(1)  <---------WRKY38(1)                                                        =====================================HOX2a_HOX2a      <---------YAB1                         <---------At4g35610 <---------ARR11(3)<---------ATERF1(1)    <---------------AGL15                    --------->At4g35610 <---------ARR14(2)<---------MYB46(3)    --------------->AGL15       <----------DOF2         ==========================HOX2a_HOX2a   <<<<<   <-----------------AGL3      --------->TOE2(3)        ------>ZmHOX2a(1)  <------ZmHOX2a(2)<--------   <-----------------AGL2    <---------ARR11(3)   <---------At4g35610  --------->SPL7 <------ZmHOX2a(2) -------ATHB12     <------ZmHOX2a(2)   --------->CCA1(2)=================HOX2a_HOX2a --------->ARR14(2) ->MYB46(1)       <---------ARR11(3)<---------TOE2(3)   ==================HOX2a_HOX2a<---------ARR14(2) ->MYB83          --------->ARR11(3)<---------YAB1--------->At4g35610--------->LBD16<------NtERF2  <<   atcaaactataaatggagaagatcaatacaatacctttaagatagagagctcatcttcctcgttccagatccggacgatcaacggcggatccaatttctt  118300                                                                                        ------>ZmHOX2a(2)                                                                                       <------ZmHOX2a(2)                                                                                      --------->ARR14(2)                                                                                      <---------ARR14(2)                                                                                      <---------ARR11(3)                                                                                      --------->AGP1                                                                                      --------->ARR14(3)                                                                                      <---------ARR14(3)                                                                                      --------->ARR11(3)                                                                                     <---------GLK1(1)                                                                                 --------->ALFIN1                                                                                <---------LBD16                                                                                --------->LBD16                                                                               <---------ANAC58                                                                               <---------ANAC46                                                                               <---------ANAC58                                                                           --------->KAN4(2)                                                                          --------->HSFB2a(1)                                                          --------->ANAC58<---------HSFC1(2)                                                          --------->ANAC58--------->HSFC1(2)                                                         <---------ZAT18  <---------KAN4(1)                                                        <---------ALFIN1  --------->KAN4(1)                                                       --------->At4g35610<---------HSFB2a(1)                                                       --------->ZAT2     <----------TaMYB80                                                    <---------At4g35610  ---------->TaMYB80                                                    --------->At4g35610  <---------KAN4(2)                                               --------->ANAC58       ----------->GT1--------->GLK1(1)     <<<<<<<<<TBF1                             --------->ANAC58    ============================HOX2a_HOX2a  <<<<<<<<<TBF1                               <---------LBD16      ===========================HOX2a_HOX2a <<<<TBF1                                   ----------->HVH21      <------ZmHOX2a(1)----------->ARR10 -ARR11(3)                              ----------->RAV1(2)      <---------TOE2(3)--------->REM1(2) <<<<<<<TBF1           <<<<<<<<<TBF1    <---------At4g35610  <----------DOF2   <---------ANAC55(1)   cttcttcttcttcatcttcatcttcttcttcatagtctcttcttctgcgacggaagcagcacgctttgaggaaggaatattccgtggagatcttcgatgg  118400                                 =====================HOX2a_HOX2a                            <---------ALFIN1                                  <----------DOF2                           ------>MYB46(1)       --------->At4g35610         <---------ANAC58         <---------MYB52(1)------>MYB83        ------>ZmHOX2a(2)         <---------ANAC58        <-------GAMYB     ----------->RAV1(1)<---------ARR14(2)          <---------ANAC58   <---------SPL7    --------->At4g35610--------->GLK1(1)  <-----------GT1   <---------ANAC58   --------->ZAT18 --------->YAB1<------ZmHOX2a(1)  <---------LBD16      <---------ANAC46          -- <---------------AtSPL3  --------->AtMYB61   --------->ARR14(2)    <---------YAB1                  <-   gagagggtaccgttggagttatcagcaccaacacaggaagagaaatcgatctgcttcggagtcaccatgcttattgcttgctttagacttgctgattcta  118500                                   <----------DOF2                              --------->ANAC46                              --------->ANAC58                    --------->ANAC58                              --------->ANAC58                    ----------->GT1                        <---------ATHB12                          --------->ANAC58          <---------ZAT14<---------ICU4             --------->LBD16          *TSS          --------->ZAT14--------->YAB1 ---------->DOF2          --------->DAG2      --------->ZAT6 ------->ZAT18         --------->ARR14(2) ----------->GT1       ---------->DOF2 ----------->GT1 --------ZAT18         <---------ARR14(2)--------->DAG2    ---------->DOF2  <------ZmHOX2a(1)     <--   gggcgcatgcagagcagtgattcccaatcttcacgacctttaaaaagtgaaacccgagagaaaaagaaaagcaaaataggatgagtaacacttggccata  118600                                                                                               <-----                                                                                             --------                                                                                            <--------                                                                   ------------>CBF       --------->WOX13(1)           --------->YAB1               <-----------GT1  --------->YAB1                --------->GLK1(2)          <-------TEIL             <----------DOF2      <-------TEIL                   <---------ARR11(3) --------DOF2               <----------DOF2<-----------GT1 ------------>CBF            --------->ARR11(3)   cttttctcaacattcataacaaaacaaacactttcatctttttttctactgtttaatattcatcaatagtacaattttgctcttgcaaaaatctatcatt  118700                                <----------DOF2                               <---------DAG2                             -------->P                             ------->TEIL                            <-----------GT1       --------->AHL20(2)                    --------->AHL20(1)            <---------AHL20(2)                    --------->AHL20(2)       <---------AHL20(1)                           <---------ARR11(3)                    <---------AHL20(1)       --------->AHL20(2)                           --------->ARR11(3)                  <---------AHL20(1)         <---------AHL20(2)                           --------->AHL20(1)                  --------->AHL20(1)         --------->AHL20(1)                      <---------ANAC46    --------->ANAC55(2)  --------------->AtSPL8  --------->AHL20(2)             --------->ATHB12    <---------ANAC55(2)<---------AHL20(2) --------->YAB1                   <---------TOE2(3)        - ----YAB1         <---------AHL20(2)     <---------AHL20(2)                <---------YAB1 <---------AHL20(1) ->YAB1        --------->AHL20(2)    --------->AHL20(2)                    <---------TOE1(3)      --- -ATHB12  ----------->GT1<-----------GT1--------->AHL20(2)     <-----------GT1 <-------TEIL    <-----   ttagtcacttaatagtataaaatattttatctaccttttttatataataaattaaaatttagttttttctacattttaagattcattgctgatatatttt  118800                <---------AHL20(1)                --------->AHL20(1)         <---------AHL20(1)         --------->AHL20(1)         --------->AHL20(2)         <---------AHL20(2)        --------->YAB1                               <---------AHL20(2)        --------->AHL20(2)                          --------->AHL20(2)        <---------AHL20(2)                          <---------AHL20(2)       <---------YAB1                        <---------AHL20(2)                                     <     --------->YAB1                       <---------AHL20(2)                                        -     <---------ICU4                       --------->AHL20(2)                                       <-    <---------AHL20(2)                 --------->AHL20(1)                                          --    --------->ICU4                     <---------ARR11(3)            <---------ARR11(3)         -----    <---------ATHB51                   <---------AHL20(1)            --------->ARR11(3)     ---------    --------->AHL20(2)        <---------YAB1 <---------YAB1--------->ARR11(3)               --------- -------->AHL20(2)   <-----------GT1   --------->ARR11(3)  <---------ARR11(3)               --------- -------->GT1 <---------AHL20(2) <---------WOX13(1)<---------YAB1---------->DOF2        <-----------GT1 ----AHL20(2)--------->AHL20(2)--------->ATHB12 <---------YAB1  <---------AHL20(2)  --------->AHL20(1)   aagtaaataattatattatatattatccatttctgattgaatatttttttattattaaatagatattaaaaggtatttgaacaaaacatattacacgata  118900     xxxxxxxxxxxxxxxx>smallRNA(s)    <---------AHL20(1)    --------->AHL20(2)    --------->AHL20(1)    <---------AHL20(2)                                                    <---------AHL20(2) ---------AHL20(2)                                                     <---------AHL20(1) -------->AHL20(2)      <---------LBD16      --------->TOE2(3)         --------->AHL20(1) --------AHL20(2)     --------->ARR14(2)    ----------------->AG  --------->ARR11(3) ------->AHL20(2)     <---------ARR14(2)    ----------------->AGL1<---------ARR11(3) ---->AHL20(2)<---------DEAR3(2)           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) >ANAC58     <---------DREB2C(2)     --------->ICU4             <---------TOE2(3) >ANAC58    ---------->ID1--------->LBD16 <-----------GT1 --------->ARR11(3)                        < >ANAC46  <-----------RAV1(1)   ----------->GT1           <---------ARR11(3)      <---------GLK1(1) -   aattaataaattttgtcggtctcaaatcggggtaatgtaaaaattaaccaaaatcgataagataataagataatattttttttgaaatccctatgtaaaa  119000                              --------->YAB1                           <---------ICU4                           --------->YAB1                          --------->ICU4                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                        --------->YAB1                   --------->AHL20(2)                   <---------AHL20(2)                                                    --------->ATHB12                  --------->AHL20(2)  <----------DOF2                                    --------->ATHB51               --------->YAB1<---------YAB1                                             --------->ICU4              <---------YAB1 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                       <---------YAB1             --------->ARR11(3)    --------->ARR11(3)                     <----------DOF2<---------ICU4             <---------ARR11(3)    <---------ARR11(3)                  ------->TEIL   --------->YAB1       --------->ANAC46<---------AHL20(2)                      <---------AHL20(2)  --------->ANAC58 ---------------AtSPL8 --------->AHL20(2)                     <---------AHL20(2)   --------->ANAC46 -------------->AtSPL8--------->AHL20(2)      <-------TEIL    --------->AHL20(2)   --------->ANAC58 <   atatggtaccagtaatatcataaaattaataatcataaatctttagcatacattcaaagactaattttatatgaaacttttgttcaagtcataattgcaa  119100  Previous    Next  AGI:  At4g00270.1    Description:  DNA-binding storekeeper protein-related. similar to DNA-binding storekeeper protein-related [Arabidopsis thaliana] (TAIR:AT2G25650.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39806.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO38810.1); contains InterPro domain Protein of unknown function DUF573 (InterPro:IPR007592) Range:  from: 117152    to: 118577    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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