Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        --------->AHL20(1)                                                           --------->AHL20(2)                                                           <---------AHL20(2)                                                         --------->AHL20(2)                                                       --------->AHL20(2)                                                       <---------AHL20(2)                                                     --------->AHL20(2)                                                     <---------AHL20(2)<---------AHL20(2)                                               <---------AHL20(2)<---------AHL20(2)                                               --------->AHL20(2)--------->AHL20(2)              ------>NtERF2                  <---------AHL20(2)--------->AHL20(2)             --------->ANAC46                --------->AHL20(2)<---------AHL20(2)             --------->DREB2C(2)           --------->AHL20(2)<---------AHL20(2)             --------->DEAR3(1)            <---------AHL20(2)--------->AHL20(2)     --------->AHL20(2)     --------->AHL20(2)       <---------AHL20(2)   <---------AHL20(2) <---------AHL20(1)     <---------AHL20(2)       --------->AHL20(2)   --------->AHL20(2)<---------AHL20(2)  --------------------->WRI1  --------->AHL20(1) --------->AHL20(2)--------->AHL20(2)         <------  --------->TOE2(3)     ----------->GT1--------->AHL20(2)<---------AHL20(2)   <---------At4g35610 >DOF2     <---------At5g28300<---------AHL20(1) <---------AHL20(2)<---------AHL20(2)         -------   atcacattaaaatcaccgccaaaaattagtaattaattagattatatatatatatatatatatatatatatatatatttaagctcattttatacatttat  89600           <---------AHL20(2)                            <----------TaMYB80          <---------AHL20(1)                            ---------->TaMYB80          --------->AHL20(1)                    <---------YAB1                                    <--          --------->AHL20(2)                  <-----------GT1                 <---------MYB46(3)  ---          <---------AHL20(2)              <---------AHL20(1)               <---------ANAC58      ----         --------->AHL20(2)               --------->AHL20(2)               <---------ANAC58      <---  ----------->GT1      <---------ZAT6     --------->AHL20(1)               <-----------RAV1(1)   <--- ---AHL20(2)      --------->YAB1         <---------CCA1(2) <-----------GT1 <---------ANAC46      ---- -->AHL20(2)     <---------YAB1       <-------TEIL   ----------->GT1--------->ARR11(3)        -------   ttgtttgtaaaattaatttctcatagtattagattgaatgttcatatattacaattggtatataccataagatagttgtgtggttcgatgtaacaaaaat  89700       <---------------AGL15       --------------->AGL15                                                                        -      ----------------->AGL2                                                        <---------ARR11(3)  --------->AHL20(2)                                                    <---------ANAC58            - -------AHL20(2)                                                        <---------ANAC58   --------->ZAT6 ------>AHL20(2)                                         --------->ARR11(3)         --------->ARR11(3) ----->AHL20(1)                ----------->GT1           --------->ARR14(2)     ---------->DOF2    <- ------AHL20(1)             ---------->DOF2              <---------ARR14(2)  --------->ANAC58      <- ------AHL20(2)    --------->DAG2                        <---------ARR11(3)  --------->ANAC46-------- ----->AHL20(2)   ---------->DOF2    --------->YAB1      --------->ARR11(1)  --------->ANAC58-------- -->YAB1   ------------------------>ANAC81<---------ATHB12--------->CCA1(2)  --------->AtLEC2--------   aaaattaaaccagaagtagaaaaagtgaaggaaagggaataacaatgaagaagttgaaagatatggaatgttttgcttcacgcaaagagcttaacacgag  89800      --------->ANAC46    --------->ANAC58    --------->ANAC58   <---------ZAT18   --------->ZAT14  <----------DOF2   --------->ZAT18 <---------ANAC46 -------->ANAC58   <---------ANAC58 -------->ANAC58   <---------ANAC58 --------------AtSPL8                     <<<<<<<<<TBF1 --------------AtSPL3                  <<<<<<<<<TBF1                <---------AHL20(2)              - ->ANAC58     <---------ANAC58     <-----------GT1       <-----------GT1<---------AHL20(2)          < ->ANAC46     <---------ANAC58  <------------------------ANAC81    <---------AHL20(2)   --------->YAB1 ->ANAC58<---------ALFIN1    <----------DOF2 <<<<<<<<<TBF1     <----------DOF2          <-----------GT1   acaagtacgctccatcgcgttgctttgaagtcttttttttcttcttcttcttcttgtcttaacctcttttttattttttagtcttggtaataacaagact  89900                <----------DOF2                <---------DAG2              --------->TOE2(3)                --------------->AGL15    ------>MYB83             <-----------GT1           ------->GAMYB              ==============HOX2a_HOX2a          <---------YAB1               <---------MYB59            ------>ZmHOX2a(2)         <---------AHL20(2)           --------->MYB46(3)         ===============HOX2a_HOX2a       <---------YAB1                --------->ANAC58            <------ZmHOX2a(2)     --------->YAB1                  --------->ANAC58            <---------GLK1(1)     <---------ICU4                 ------->GAMYB                --------->GLK1(1)     -------->ATHB1                <---------MYB55(2)           --------->ARR14(2)    <---------AHL20(2)             <---------MYB111(1)          <---------ARR14(2)    --------->AHL20(2)             <---------MYB111(2)       --------->SPL7    <---------ATHB51              ------>MYB46(1)          <---------SPL7    --------->ICU4                ------>MYB83            <---------ANAC58 --------->AHL20(2)              --------->ANAC46         <---------ANAC58 --------->AHL20(1)            --------->MYB46(3)     <---------ANAC58 <---------AHL20(2)           -------->P ------>MYB46(1) --------->SPL7         <----------DOF2  <--- -------->AHL20(2)   <---------AHL20(2)--------->AtMYB61<---------TGA2(2)------>ZmHOX2a(1)       ---- ---------AHL20(2)   <---------YAB1--------->MYB46(3) <---------ANAC58------>ZmHOX2a(1) ---------->ARF1   aattaaattattattttactttttttattatctaccaacaaccaaaccctagttttgcttacgtccgatctcctccttctctcttttcttctctcccaaa  90000                                    *TSS                                                    ---------                                  --------->DAG2                                      <---------ALFIN1                                 ---------->DOF2                                   <---------ICU4                            ------->TEIL                                           <-----------GT1                         --------->ANAC46                                         <---------ATHB12        <----------DOF2  --------->ANAC58  <---------ICU4                    --------->TOE2(3) ------    <----------DOF2      --------->ANAC58  <---------GLK1(2)       ------->TEIL   --------->MYB46(3) ------HSFB2a(1)       --------->YAB1   --------->YAB1            <---------CCA1(2)--------->YAB1  -- ----->HSFB2a(1)      <---------ATHB12 <---------YAB1----------->GT1         --------->TOE1(3)-------   cgttccctttcttttttttctctaatcacgaaccaaaaagcatcataatctcgatgagttaaatccatgtatctcaaaaccctaatcaccacttagctag  90100                                                                                                   <-                                                                                                  ---                                                                                                  ---                                                                                                  <--                                                                                    --------->ALFIN1-                                                                               <---------MYB46(3)<---                                                                          --------->At4g35610    <---                                                                       --------->At4g35610       <---                                                                       <---------At4g35610       <---                                                                       <---------ZAT2           <----                                                                       --------->ZAT2 <------ZmHOX2a(1)                             ----------->GT1              --------->GLK1(1)   <---------AtMYB61 <----                             <---------ANAC46             <---------GLK1(1)   --------->ALFIN1  <----                            <---------AtMYB61            --------->ARR14(2) <---------MYB46(3) <-----       ----------->GT1    <---------ANAC58               <---------ARR14(2)<---------DEAR3(1)  ------      ----------->GT1     <-----------RAV1(1)         <---------ANAC46----------->RAV1(1)   <--------    ---------->DOF2       <---------ANAC58           --------->At4g35610  <---------At4g35610 ------- >STY1(2)                 <---------ANAC46     --------->At4g35610  --------->ZAT2 <------ZmHOX2a(1)- ----->GT1   --------->AHL20(2)           --------->At4g35610       <---------At4g35610     <-------- -------->DOF2      <------ZmHOX2a(1)     <---------At4g35610     XXXXXXXXXXXXXXXXXXXX>MIR834<------- -------->AGL15 ---------->DOF2    ---------->DOF2   <---------LBD16--------->At4g35610  <------ZmHOX2a(1)   taaaaggaaaggaaaataaaaaggacttgtgtggtagaaaaggaagatgagcagtagcggaaaccctagcagcagcagcggtggaggaggaggaccgtgc  90200  <-------MYC2  <-------PIF5  ------->PIF5  <-------PIF4  ------->MYC2  ------->MYC3                                                                           <---------DEAR3(2)  <-------MYC3                                                                         <------NtERF2  ------->PIF4                                                                       <---------RAP2.6(2) <---------ANAC58                                                            <---------ZAT18 <---------ANAC58                                                            --------->ZAT14 <---------ANAC46                                                            --------->ZAT18 <------NtERF2                                                               ------>NtERF2<-------GAMYB --------ANAC46                                                              <---------ZAT14 ------>ATERF1(1)                                                           --------->DEAR3(1) --->NtERF2                                                                --------->RAP2.3(1) ----NtERF2                                                                --------->ATERF1(1) ----->NtERF2                                                              <------NtERF2<---------DEAR3(1) ------ATERF1(1)                                                          <---------RAP2.3(1) ------DEAR4(2)                                                           <---------ATERF1(1) ------RAP2.3(1)                                                          <---------DEAR4(2) ------ORA47(2)                                                           <---------ORA47(2) -----DEAR3(1)                         ------->TEIL                      <---------RAP2.3(2) -----RAP2.3(2)                      <------NtERF2                       --------->ATERF1(1) -----RAP2.3(3)                  ------>NtERF2                           <---------DEAR3(1) ----ABI4(1)                     <---------ATERF1(1)                     --------->ALFIN1<---------MYB46(3) --->SPL7                      --------->ATERF1(1)               <---------ZAT2      <---------DEAR3(1) -ANAC58                  <-----------RAV1(1)                    --------->ZAT2      <---------RAP2.3(2) -->ALFIN1                --------->ALFIN1                      --------->ANAC46    <---------LBD16 -------->ABI4(2)       --------->ALFIN1                       --------->LBD16<---------ALFIN1 -ANAC58 <---------ARR11(3)   <---------At4g35610     <----------DOF2   --------->At4g35610 <-------TEIL --SPL7  --------->ARR11(3)<-----------HVH21      ------>ZmHOX2a(1)    --------->ALFIN1------>NtERF2-   ggcgcgtgcaagttcttgagaaggaagtgtgtcgctggctgcatcttcgctccttactttgactccgagcaaggagcggcgcacttcgcggcggttcaca  90300                                                                    <---------DEAR3(2)                                                                  <------NtERF2                                                                  <---------MYB52(1)                                                                 <-----------HVH21                                                                 ------>NtERF2                                                                --------->DEAR3(1)                                                               <------NtERF2                                                               --------->ATERF1(1)                                                               --------->RAP2.3(1)                                                              <---------ATERF1(1)                                                              ------>NtERF2                 <-----------TGA1           --------->LBD16 --------->SPL7                --------->O2               --------->LBD16----------->HVH21           --------->ANAC58               <---------HSFB2a(2)--------->ANAC58           --------->ANAC58               --------->HSFB2a(2)--------->ANAC58          --------->ZAT18       <---------ALFIN1     --------->MYB46(3)  --------->WOX13(1) -------->ALFIN1<---------O2  ------>ZmHOX2a(1)--------->YAB1--------->ANAC46   <----------DOF2   aggtgttcggagcgagcaacgtctccaaactcctccaccatgttcccgagcataaacgaccagacgccgtcgtttcaatctgctttgaggctcaagctcg  90400                       <---------CCA1(2)                       <----------DOF2                     <---------ANAC46                       <---------YAB1                     <---------ANAC58                     <---------AHL20(2)            <---------ICU4                    <------NtERF2                         <---------ICU4                -------------                   <---------ATERF1(1)                    -------->HAHB4             --------->ATHB12                  <---------DEAR3(1)                     <---------YAB1         --------->AHL20(2)                 --------->At4g35610                     <---------ATHB51       <---------AHL20(2)                 <---------At4g35610                     --------->ICU4         --------->YAB1               --------->ANAC46                    ----------->GT1          <---------AHL20(2)              <---------LBD16                    <-----------RAV1(2)        --------->AHL20(2)          --------->ARR14(2)                   ----------->RAV1(1)       --------->TOE2(3)          <          <---------ARR14(2)                 --------->At4g35610        ----------->GT1<---------YAB1    --------->GLK1(1)<---------ANAC58        <---------At4g35610   --------->YAB1   <---------YAB1---   tctcagagaccctatctacggctgcgtctctcacatcgtctctcttcagcaacaggttaattattcttttcataacgtttaattatatgattagtactat  90500  Previous    Next  AGI:  At4g00220.1    Description:  JLO/LBD30 (JAGGED LATERAL ORGANS). Identical to LOB domain-containing protein 30 (LBD30) [Arabidopsis Thaliana] (GB:O81323;GB:A0MF43;GB:Q1PED1); similar to LBD18 (LOB DOMAIN-CONTAINING PROTEIN 18) [Arabidopsis thaliana] (TAIR:AT2G45420.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24488.1); contains InterPro domain Lateral organ boundaries, LOB (InterPro:IPR004883) Range:  from: 90036    to: 92237    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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