Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                               ----------->GT1                                       <-                                   --------->ANAC58                                                <-                                   ----------->GT1                                                 <-                                   --------->ANAC58              <---------ANAC58                <---                                   <---------ANAC55(2)           <---------ANAC58              ------           ------>ZmHOX2a(1)--------->AHL20(2)      -------->ATHB1   <---------ARR11(3)       <------ -------MYB52(1)--------->AHL20(2) --------->ANAC55(2)         <---------YAB1             --------->GLK1(2)   gttttgttccatcctctaaaaaatacaaaaaaaaatcaagtaacaacgagtgaattattcaaaacatgcttgatatttaagatggttttgagaattttga  81600          <---------TOE2(3)         <---------ICU4         --------->YAB1      --------->YAB1   ----------->GT1 <--------P --------MYB46(3)                                                               --------->O2 -----MYB83          -------->P                                                 <---------O2 -----MYB46(1)    <---------At4g35610                                        <----------ID1 ------WOX13(1)   --------->At4g35610                   --------->YAB1--------->ANAC46 --->ATHB12<---------YAB1                        <---------bZIP60(1)  --------->ANAC58 ---YAB1--------->ICU4                           --------->bZIP60(1)  --------->ANAC58         ------   ttggttagtaataatgttagagctaccttgttgatggccaaggtgttaatgacatcaatggtaatgctctccaaggaatgagacgagacaccgagttctg  81700                                      ==========================MYC_MYB                                      <----------CDC5                                     <---------ZAT2                                     --------->At4g35610                                     <---------At4g35610                                    --------->ALFIN1                                  <---------ANAC46                                  <---------ANAC58                                  <---------ANAC58                                 <---------DEAR3(1)                                --------->ZAT18                                --------->ZAT14                                <---------ZAT14                        <---------AtMYB61                        --------->MYB111(1)                        --------->MYB111(2)                        --------->MYB46(2)                        <---------MYB46(3)                        --------->MYB55(2)                        <---------DEAR3(1)                       <--------P<-----------------------TaNAC69(2)                       <---------MYB55(1)             <---------TGA1a              ------->MYC3     --------->ALFIN1       --------->ANAC46              <-------MYC3   <---------ANAC58         --------->ANAC58                    --------->ANAC58             <---------O2    <---------ANAC58         --------->ANAC58                    --------->ANAC58           <---------TGA1a  <---------MYB46(3)  <---------ANAC58                          --------->ANAC46           ======================================MYC_MYB  ----------->HVH21          --------->ANAC46          <<<<<<<GRF7  =========================================MYC_MYB            --------->ANAC58        ----------->HVH21<------MYB46(1)        <---------ANAC58                   --------->ANAC58        ------>ZmHOX2a(1)<---------MYB46(3)   <---------YAB1            --------->HSFB2a(1)        -- ----->HVH21 --------->O2<------MYB83--------->ZAT2   --------->TGA1a --------->MYB52(1)<---------ALFIN1   acatctcttcctgacatgtgtctaggttggtgagtgcggtgctgagccatgcttgcacgtctgacctagagcaaacgttcttgggacacaacacgctctc  81800                                                                                 <---------ANAC55(1)                                                                                 <---------ANAC58                                                                                 <---------ANAC55(2)                             <-------TEIL           <----------DOF2              <---------ANAC58                            ===================HOX2a_HOX2a                       --------->ANAC55(2)                            <------ZmHOX2a(2)      <---------ANAC58             <-------TEIL                           --------->AGP1          <---------ANAC58           --------->ARR14(2)                 <---------At4g35610           <---------ANAC58          --------->ANAC58                 <---------ZAT2                <---------ANAC58 <-----------RAV1(1) <-----------HVH21               <---------ZAT18          ------>ZmHOX2a(1)  <---------MYB59 --------->AHL20(2)     ----------->GT1       --------->ARR14(2) --------->ZAT2 ------>MYB46(1)  <---------ARR14(2)  --- ------->WRKY38(1)         <---------ARR14(2) <---------ZAT2 ------>MYB83--------->ANAC58       <----   gttgagcctgtgaatagtctgctcgtacagatccatacattcctcccaagcttgctttgaaccaaattgtggctcaagaaaatacgtgtcactcttggct  81900                          ----------->HVH21                         --------->ANAC58                         --------->ANAC58                         --------->ANAC46    --------->REM1(2)                  <---------MYB46(3)         --------->ZAT14                                        -       <---------ALFIN1 --------->LBD16      <---------ZAT14                                      <--   --------->At4g35610  <---------LBD16<---------ARR14(2)                     --------->ZAT14     --- -------->HVH21   --------->MYB52(2)   --------->ARR14(2)                 <---------ICU4        ----- ------DOF2   <---------ZAT6          <------ZmHOX2a(1)               <---------AHL20(2)      <------   ttgacagccccatctagtgttcgttccacggacacttggaggaactgtgtagtgcttcttatgggtttgtgtttaatcagtagagtcttgcattcacccg  82000    <---------ANAC58    <---------ANAC58    <---------ANAC46   <------NtERF2   ------>NtERF2  <---------RAP2.3(1)  --------->LBD16 <---------RAP2.6(2)                                                                      ------->MYC3 <---------RAP2.3(2)                                                                      <-------MYC3 <---------DEAR3(1)                                                                      --------->O2 -------->ATERF1(1)                                    --------->YAB1                    --------->ANAC46 -------ARR14(2)                                      <---------YAB1                   <---------ALFIN1 ------>ARR14(2)                         <------ZmHOX2a(1)                    <---------YAB1 ---->LBD16                 --------->LBD16   --------->TOE2(3)              ------------>CBF ---LBD16      <---------TOE1(2)       <---------TOE2(3)                    <-----------GT1   gatgcggcgtttcatcgcacatttcatttccgaaaaccattgaggaaacatcagttatcagaaataacatgaaacattttacaattactccacgtttcat  82100                                                                                                <----                                                                                          <----------                                                                                    <------MYB83-----                                                                                    ----------->GT1                                          <---------YAB1                    <------------CBF <-------               ----------->GT1    --------->YAB1                       <-----------GT1   <-----------GT1              <---------TOE1(3)   <---------ICU4                --------->CCA1(2)   <------MYB46(1)              <---------TOE2(3) ------->TEIL                   <---------AHL20(1)  <---------AtMYB61         --------->ZAT6      <---------YAB1                    --------->AHL20(1) <---------WOX13(1)   <---------TOE2(3)   --------->AHL20(2)<-----------TBP    --------->AHL20(2)   <------------CBF   cgtttgatgtttcactaaggtaacatataatatgaatcatggtttttatagacattttcccataatatataagttacaaattggattggttttaactttt  82200             ------->TEIL                                                                     <------             <---------TOE2(2)                                                              ---------          --------->ANAC58                                                                  ---------          --------->ANAC58                                                                  <--------      --------->MYB46(3)                                                                   --------->AHL20(2)   --------->ZAT18                                                                     --------->ICU4 -----AHL20(2)                                                                      ------>ZmHOX2a(1) -GT1 <---------MYB52(2)                                                  <---------ICU4   <---------AHL20(2) ---->AHL20(2)<-----------RAV1(1)                                      <---------GLK1(2)<---------ICU4 ---DOF2--------->MYB52(1)                <-----------RAV1(1)<-----------GT1 <---------WRKY18(1)    <   aaatgtgaactaacgcatgttgcagtttttttttttgctaagacatgttgcagttctaacttctaacctcatggaatcttgacctcctactaattaaatt  82300                              ---------->DOF2                           <----------DOF2                          ------>ZmHOX2a(2)                         <---------RVE1(1)      <------MYB46(1)    <------ZmHOX2a(2)      <------MYB83      <---------ARR14(2)             <-------TEIL     <---------TOE1(2)  --------->ARR14(3)         --------------->AtSPL8          <---------ZAT6 ------CBF              <---------ARR14(3)         <---------------AtSPL8          ----------->GT1 >AHL20(2)              --------->ARR11(3)    <---------AHL20(2)                 ----------->GT1<---- >AHL20(1)              <---------ARR11(3)   --------->YAB1 --------->YAB1  --------------->AGL15 -AHL20(2)              --------->ARR14(2)   --------->AHL20(2)             ========================= ----------DOF2     ---------->DOF2         <---------YAB1 <-------TEIL     <---------------AGL15----   gtctttgtaggttttgttccatcaaagatctttaaagtcccatactattatatagagtacattcataacttatgtatactaaatagtgtaaaatatcaat  82400                                              <------ZmHOX2a(1)                                     --------------->AGL15                 --------->ANAC58                                   --------->LBD16                         --------->ANAC55(2)                                   ------>NtERF2                           <---------ANAC55(2)                                  --------->ANAC46                         --------->ANAC58         -           ---------->DOF2        --------->ANAC58    --------->TOE2(3)    ----------->GT1    ------- -----ATHB12                      --------->ANAC58 <-----------GT1     ----------->GT1        <------ ====================================================MADS_MADS --------->ANAC58          --------->ANAC58 ------>DOF2        ----------->RAV1(1)   ---------->DOF2      --------->ANAC58          --------->ANAC58   aaagaaaacaactaaaagggaacaacacagattaatccgccattaaaaggattaaacctcagtactagcaatatagtaagtaacaagaggcaagtcatca  82500  Previous    Next  AGI:  At4g00190.1    Description:  pectinesterase family protein. similar to pectinesterase family protein [Arabidopsis thaliana] (TAIR:AT2G45220.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24514.1); contains InterPro domain Pectin lyase fold (InterPro:IPR012334); contains InterPro domain Pectinesterase, catalytic; (InterPro:IPR000070); contains InterPro domain Pectin lyase fold/virulence factor (InterPro:IPR011050); contains InterPro domain Pectinesterase inhibitor; (InterPro:IPR006501) Range:  from: 80433    to: 82040    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g00200.1    Description:  DNA binding. similar to DNA-binding family protein [Arabidopsis thaliana] (TAIR:AT4G12080.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN62363.1); contains InterPro domain Protein of unknown function DUF296 (InterPro:IPR005175); contains InterPro domain HMG-I and HMG-Y, DNA-binding (InterPro:IPR000637) Range:  from: 82445    to: 84694    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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