Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                               --------->ANAC58                                                                             --------->ANAC58            ------>MYB83                  ---------->DOF2            <---------AtLEC2               <            --------->ANAC58     --------->LBD16                 --------->CCA1(2)                  -            --------->ANAC58    --------->LBD16                 <---------ARR14(2)       ---------->DOF2            ------>MYB46(1)     <---------LBD16                 --------->ARR14(2)     --------->LBD16          --------->TOE1(2)    <-----------RAV1(2)              <---------GLK1(2)     <---------HSFB2a(2)        ------->TEIL           <---------LBD16<----------ID1 <---------HSFB2a(2)  --------->ANAC58  - -->HSFB2a(2)      ----------->GT1    ---------->DOF2        --------->HSFB2a(2)  --------->ANAC58 <-   aatacgaatgaacctagcaactagaaaatttatccaggggaaaagaaaggaacaaaactatttctagatttgcataaacaagacaagtcccgaaagcagt  23469000      <---------ARR14(2)      --------->ARR14(2) <------MYB46(1) <------MYB83--------->ANAC58 ----------->GT1--------->DAG2                                                           <------ZmHOX2a(1) ---------TOE1(2)               <---------At4g35610                                --------->ANAC58 -------->MYB111(1)         <-----------HVH21---------->DOF2                       --------->ANAC58 -------->MYB59---------->DOF2  --------->At4g35610                        ---------->DOF2        <-- -------P    --------->ANAC58 <-----------RAV1(2)      <---------------------WRI1<-----------RAV1(2)   agtaggtatatatgcaagaaagtggattagggtcagatgtgaatgaacaaagagacagactaagcatacaaagaattgaaagcgcagggaaggagaggca  23469100                           --------->ALFIN1                                --------->ZAT14                           <---------ANAC58                                <---------ZAT14                           <---------ANAC58                             --------->At4g35610                          --------->MYB55(2)                        --------->ARR11(3)                          <---------MYB46(3)             <---------HSFB2a(2)                        <-----------HVH21 --------->ANAC58          <---------ARR11(3)                        --------->At5g28300 <------NtERF2--------->HSFB2a(2)<---------ALFIN1                      <---------DEAR3(1)  --------->ANAC58         <---------CCA1(2)      <---------ATHB12  <-------TEIL       <---------At4g35610 --------->RAP2.6(3)   <------ZmHOX2a(1)--------->LBD16 -----TEIL       --------->ALFIN1        --------->ATERF1(1) <---------TOE1(2) --------->DEAR3(1) ---   tacatacattcgaagagagttggagcggtgagtggcaattggagacggcaagggagagtctcgaaggatatatcttctgcaccgcaaaacaaatcaagaa  23469200                                                                          <------ZmHOX2a(1)                                                                        --------->ALFIN1         ---------->DOF2                                               <------ZmHOX2a(1)           <-    ----------->GT1                                <---------ANAC58  --------->ALFIN1           -----  ---------->DOF2                                  <---------ANAC58 <------ZmHOX2a(1)           ----- ------->DOF2<------ZmHOX2a(1)          ---------->DOF2       <---------ZAT6 <------ZmHOX2a(1)<------   gaaagaaagaaaaaaggactgaaattgaaaacagtgagagaagaaagagacttacttgagattagtggaaggaggaggaggagaagggcatttcgaccaa  23469300                                     <---------ETT(2)                                   <---------ZAT14                              <---------ZAT18                        <---------ANAC46                       <---------LBD16                   --------->ALFIN1--------->ZAT14                --------->DAG2--------->ZAT14               <------ZmHOX2a(1)     <------ZmHOX2a(1)<---------ANAC46                <---------At4g35610 ------TEIL    --------->DAG2 <---------ZAT14         --------->At4g35610 ->MYB46(1)   ---------->DOF2 --------->ZAT18       <------ZmHOX2a(1)       ---------->DOF2       --- ->MYB83 --------->ANAC58  --------->SPL7         --------->ALFIN1      ---------->DOF2          <--- ---MYB59--------->ANAC58--------->LBD16     --------->CCA1(2)     ----------->GT1     ---------->DOF2   attcataggacaaggaaaaaggtgatgcggagggcactgtagacgagagacggaggagcagaggagagagagagaaaagaaagagagaagaaagagagag  23469400                                                                                            ---------                                                                                           <---------ARR11(3)                                                                                           --------->ARR11(3)                                                                                           --------->ARR11(1)                                                                                       ---------->DOF2                                                                                   <------NtERF2                                                                                  ------>NtERF2                                                                                  --------->LBD16                                                                                  <---------RAP2.6(3)                                                                                  ----------->GT1                                                                                 --------->RAP2.6(2)                           <-----------HVH21                                     <---------ATERF1(2)      <---------ANAC46    <---------O2                                           --------->ATERF1(2)      --------->ALFIN1    --------->O2                                          --------->RAP2.6(3)    --------->ALFIN1 --------->MYB52(1)                          --------->DAG2 <---------LBD16 ------->DOF2  <----------ID1                                    XXXXXXXXXXXXXXXXXXXX>MIR2937 ---ZmHOX2a(1)<------ZmHOX2a(1)   *TSS                          ---------->DOF2 --------->ATERF1(1) <   gaaagagtgtgtggaaggagacaaaacgacgtcgaaggaagggaagggaagggaagggggaagagaaaaagccgttgaagaagccggcaaaaagatatgt  23469500                     ------>MYB46(1)                     ------>MYB83                   <---------MYB111(1)                   --------->MYB46(3)                   <---------MYB55(2)                   --------->DEAR3(1)                                                            ----                   <---------MYB111(2)                                                           <---                  --------->ANAC58                                                             ------                  --------->DEAR3(2)                                                           <-----                 ------->TEIL                                     <---------ZAT2           <---------ANAC58                 --------->PCF2                                   --------->ZAT2       --------->ARR14(1)              --------->ANAC58                                    <---------ZAT14      --------->CCA1(2)              --------->ANAC58                                    --------->ZAT14     <---------ARR11(3)             --------------->AtSPL3                             --------->LBD16       --------->ARR14(2)             <-----------------------TaNAC69(2)                <---------ANAC46       <---------ARR14(2)      --------->ALFIN1        --------->ANAC46--------->REM1(1)<---------ANAC58       <---------GLK1(2)    --------->ALFIN1<---------ALFIN1      ------->GAMYB        <---------ANAC55(2)    --------->ARR11(1)  <---------ANAC46--------->ANAC58 <---------At4g35610         --------->ANAC55(2)    --------->ARR11(3) >CCA1(2)   <---------ATERF1(1)<-----------HVH21<---------At4g35610         --------->LBD16<---------ANAC58 ---------ZAT14 <---------ALFIN1   --------->At4g35610         <---------ANAC58     ----------->ARR10   ggttcagtgtggggagacgcacccacccttacatgtcatctcaaccctacatctgtcttcaagtcccgtgctcagacccagagacaaagatttgcttctt  23469600                                                                                           <---------        <----------DOF2      ---------->DOF2                              <---------AHL20(2)    ---------->ID1     <---------AHL20(2)                           --------->ANAC55(2)  <---------At4g35610   <-----------GT1     --------->AHL20(2)                    <---------WOX13(1)  ---------->DOF2 ----->AHL20(2)    --------->AHL20(2)                    <---------WOX13(1)    --------->YAB1 ------AHL20(2)   --------->AHL20(2)                   --------->ATHB12   --------->AHL20(2)    ----- --->TOE2(3)    <----------DOF2              <---------ARR14(2)     <---------ANAC55(2)  --------->At4g35610 -----DOF2     --------->TOE2(3)             --------->ARR14(2)  <------ZmHOX2a(2)    <-------TEIL   taatttttctctttcttcctttaaattaaaaaaaaggaatgagagagtatttgttcttcattgatggatcacatatttaaatcaaaagtacagctttcgg  23469700                                                     ------>MYB46(1)                                                     ------>MYB83                                      <---------------AGL15                                      ----------->RAV1(1)                                      --------------->AGL15                                     <-----------------AGL3                         <---------ZAT14                                     ----------------->AGL1                         --------->At4g35610                                     ----------------->AGL2                         --------->ZAT14                                     ----------------->AGL3                         <---------At4g35610                                     <-----------------AGL1                    <---------YAB1                                     <-----------------AG                    <-----------GT1                         <----------DOF2         <---------HSFC1(2)         <---------YAB1               --------->AtMYB61     ----------------->AG                <---------YAB1    <---------GLK1(2)   <---------ANAC58         --------->HSFC1(2)      --------->AHL20(2) -DOF2  <---------YAB1  <---------ANAC46        <---------GLK1(1)        <---------AHL20(2)       --- ->NtERF2--------->YAB1 <---------ANAC58  ---------->DOF2             <----------DOF2         <------   ccttgagattatcaaaaccacaacttgcttgtctgttttcccacaaaaggaaacctcccttccatgcttcttctttttattactactgcagactagcttt  23469800        <----------DOF2                                          <---------AHL20(2)     <-----------GT1     <-------TEIL                        ----------->GT1 ------->ID1    <---------ARR11(3)                          <---------TOE1(3)                    ---- ----DOF2      <---------CCA1(2)                ------->TEIL<---------TOE2(3)                   -----   gtttttttttcttttctaaatcttatattcatacattttgtgtctctacgaatttttagtttagggtttaatttgtagagcatagctgtgctagtataaa  23469900  Previous    Next  AGI:  At3g63530.1    Description:  BB (BIG BROTHER); protein binding / zinc ion binding. similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT3G19910.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40855.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 23467132    to: 23469434    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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