Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                          --------->TOE1(3)                                                                        --------->TOE2(3)                                                                       <---------ANAC58                                                                       <---------ANAC55(2)                                                                       --------->ANAC55(2)                                                                       <---------ANAC58                                                                    <---------MYB52(1)                                                               ------------>MYB.PH3(1)                        <---------LBD16                   --------->ZAT18<---------MYB52(1)                       ------>ZmHOX2a(2)            <---------GLK1(2)  <---------ANAC46               --------->At4g35610             <------NtERF2   ------------>AtMYB77               <---------At4g35610             ------>NtERF2  --------->DEAR3(1)               ----------->RAV1(2)           <---------RAP2.6(2)    <---------ARR14(2)               <---------ZAT2    <----------DOF2<---------ANAC46    --------->ARR14(2)               --------->ZAT2<---------CCA1(2)--------->DEAR3(1)   <-------GAMYB          ------>ZmHOX2a(1)        --------->AtMYB61   ------->TEIL    <---------LBD16  --------->DEAR3(2)      ------>ZmHOX2a(1)   agcacagacaccatctctgctgggatcgcgcatctctttagagcttcgcggcctgaatcgcgcacagacggttacgttagacatctcctctccttatcgg  23454800             ----------->GT1           --------->ZAT14           <---------ZAT14         <---------ZAT14            <---------At4g35610                            <---------At4g35610         --------->ETT(2)           --------->At4g35610                            --------->ZAT2         <---------ETT(2)           <---------ZAT2                                 --------->At4g35610         --------->ZAT14          <-----------RAV1(2)                              <---------ZAT2  <---------ZAT2      --------->ANAC58                                   <------ZmHOX2a(1)  --------->ZAT2      --------->ANAC46                 <---------LBD16  --------->ANAC58  --------->At4g35610 --------->ANAC58      <---------YAB1              --------->ANAC58    ---------   aacgagctcagtctacagtgaaacacccaaaatgagtcagcagaagatgaatgaaattggggaaatagtagcacaggaaatttgaagctgagagaaaagg  23454900                                                        <------NtERF2                                                       --------->LBD16                        <---------ZAT14               <---------ANAC46                     <---------ANAC46             <---------ANAC58        -------->P   <---------ANAC58             <---------ANAC58   <-----------ARR10 <---------ANAC58             <---------ANAC46               *TSS    ---------->DOF2 ->DOF2<-----------GT1 --------->ALFIN1  <---------GLK1(1)---------->DOF2<---------GLK1(1)   aatcggaacttacctctcaaatggagtggagagtcagagtagggtttctcttacgggcgggaaagaagaaactcgaaatctgatttttgagaaaagagaa  23455000                                                 <-------GAMYB                                                <---------MYB46(3)                                                ----------->GT1                                               ===========================================MYC_MYB                                               <--------P                                  <------ZmHOX2a(1)                                              <-------GAMYB                        <-----------HVH21                                              <---------ANAC58                   ------->MYC4                                              <---------ANAC58                   -------->ABF1                                       <---------ANAC58                          ------->MYC3                                       <---------ANAC58   --------->CCA1(2)      <-------MYC2                                     <---------ANAC55(2)  <------ZmHOX2a(2)      <-------MYC4                                   --------->CCA1(2)     <---------AGP1          <-------MYC3                                   --------->ARR14(1)    --------->ARR11(3)      ------->MYC2                                  --------->ARR11(1)     <---------ARR11(3)     <---------TGA1a                                  --------->ARR14(2)    --------->RVE1(1)       <--------ABF1                                 <------ZmHOX2a(1)   =====================================bZIP_DOF                                 =================================HOX2a_HOX2a   =====================                                 ================================HOX2a_HOX2a    --------->TGA1a -----                                ----------->ARR10=========================================MYC_MYB                             --------->O2     ============================================MYC_MYB ---                          ----------->HVH21   <---------ANAC46                  --------->O2    -----           <------ZmHOX2a(1) <---------O2--------->ALFIN1--------->AGP1         <---------ANAC55(2)     >>>>>>>>>TBF1       <-----------HVH21 --------->ALFIN1------>ZmHOX2a(2)    --------->ANAC55(2)<-  >>>>>>>>>TBF1  <------ZmHOX2a(1)<---------ARR14(2) ---------->DOF2            <---------O2    -----   ggaagaagaagaaggagaaggagaagaggtcacgaggatacgcgtgtgggttgttaaaagatctaatggtccataagaagacacgtgtcactaggaacac  23455100                 --------->ANAC58                 --------->ANAC46                 --------->AtLEC2                ------>NtERF2               <---------ALFIN1             ------>NtERF2             <-----------HVH21             <------NtERF2          --------->ATERF1(1)                                                 *TSS     <---------TOE2(3)                                                      --------->ZAT18     --------->DAG2                                                      <---------ANAC58     <---------TOE1(3)                                                   <---------ANAC46 --------->At4g35610                                                     <---------ANAC58 <---------At4g35610       --------->YAB1                              <---------ZAT14 =======MYC_MYB--------->DEAR3(1)                                     <------NtERF2 ---->ANAC58--------->ANAC46                                   --------->STY1(1) ------>At5g28300--------->ANAC58                  <-------GAMYB      --------->ALFIN1 ---->ANAC58--------->ANAC58                      --------->ALFIN1  <---------ANAC46        <-------- -------P<---------ATERF1(1)                    <---------ANAC58    <---------ANAC58      --------->ANAC58 ---->ANAC46--------->ANAC58                    <---------ANAC58    <---------ANAC58      --------->ANAC58   ggtagctaaggtgcccgccacgcagagaataatagcttagaaagaatagggggtgttgttatccccttgggcgtggagtggattagggagactcgcactc  23455200                                                                                             <-------                                                                                            ---------                                                                                          <---------ARR14(2)                                                                                          --------->ARR14(2)                                                                                        <------NtERF2                                                                                        ------>NtERF2                                                                                        <---------ATERF1(1)                                                                                       --------->RAP2.6(2)                                                                                       --------->DEAR3(1)                                                                                       --------->RRTF1(2)                                                                                       --------->RAP2.3(2)                                                                                      --------->DEAR4(2)                                                                                      <------NtERF2                                                                                      --------->RAP2.3(1)                                                                                      --------->RRTF1(1)                                                                                      --------->ATERF1(1)                                                                                     ------>NtERF2                                                                                     <---------ATERF1(1)                                                                                    <---------DEAR3(1)                                                                                    --------->RAP2.3(3)                                                                                    --------->DEAR3(1)                                                                                    --------->RAP2.3(2)                                               <---------ANAC58                     --------->ANAC46                                               <---------ANAC46                    --------->ERF1                                               <---------ANAC58                    --------->RAP2.3(1)                                               ----------------------->TaNAC69(2)  --------->RAP2.6(1)                                              <---------ZAT2                       --------->ORA47(2)                                              --------->ZAT2                       --------->ATERF1(1)                                              --------->At4g35610                 <---------RAP2.3(1)                                              <---------At4g35610                 <---------ATERF1(1)                               --------->GLK1(1)                                 --------->ANAC46                               --------->At4g35610                               --------->ANAC58    <<<<<<<<<TBF1   ---------->DOF2 ----------->RAV1(1)                         --------->SPL7 <<<<<<<<<TBF1------->TEIL     <---------At4g35610                     <---------YAB1--------->ABI4(1) -ALFIN1 <----------DOF2---------->DOF2     <---------RAP2.6(2) ------>ZmHOX2a(1)--------->ANAC58   ttcttcttcttctttgtacccagaaagaaagagagctccaacaatggctgcttgcgctactcactcctctctcatgctagcatacgccgccgcatccact  23455300                                                        <---------MYB55(2)                                                        --------->MYB46(3)                                                       ------>MYB83                                                       -------->P                                                      ------>MYB46(1)                                                      ------>MYB83                                                    --------->MYB46(3)                 <---------ALFIN1                   <---------MYB59       <---------ARR11(3)                          --------->ANAC58                                 -       <-----------ARR10                           --------->ANAC58                            ------      <------ZmHOX2a(1)                        --------->HSFB2a(2)                           --------    <---------TOE1(2)                          <---------HSFB2a(2)                          <--------    --------->LBD16                        <---------At4g35610                              <--------   <---------HSFB2a(2)                     --------->At4g35610  --------->At4g35610      <---------ARR14(2)   <---------LBD16 --------->ANAC46        <---------ZAT2       <---------At4g35610      --------->ARR14(2)   --------->HSFB2a(2)             <----------DOF2 --------->ANAC46                  <---------ANAC46 --ALFIN1<---------MYB59    <----------DOF2--------->ZAT2<---------ALFIN1<----------DOF2--------->GLK1(1) >MYB46(3)  -------->P  <---------CCA1(2) ------>NtERF2------>MYB46(1)--------->ANAC46 <---------MYB46(3)   cgttcccaggaccttacccctactccatctcttttctcttttgccagctccagacccaaccacttgagcttcccgcttcttctccttgggggttccaggg  23455400                                                            <----------CDC5                                                           ----------->RAV1(2)                                                           <---------At4g35610                                                           <------NtERF2                                                           --------->At4g35610                                                         <---------RAP2.6(2)                                                      --------->ALFIN1                                                      --------->ATERF1(1)                                                      ----------->HVH21                                                     <-----------HVH21                                                    <---------ANAC46                                                    ===================MYC_MYB                                                    --------->DEAR3(1)                                                    <---------O2                                                    --------->O2                        ----------->RAV1(2)                                --------->AtMYB61   --------->TGA1a                    --------->ARR14(2)                                ==============================MYC_MYB              <------ZmHOX2a(1)-                                ------->GAMYB       <---------TGA1a           --------->ANAC58      -                               --------->MYB46(3) --------->LBD16             --------->ANAC58      -        <---------At4g35610    <---------MYB55(2) ------>NtERF2               --------->ANAC46      - -------->LBD16               ------>MYB83       --------->DEAR3(1)          <---------LBD16   ------ ----->HVH21                  ================================MYC_MYB      <---------REM1(2)  ------- ->LBD16--------->At4g35610   -------->P         --------->ANAC46        --------->ANAC46     <------ -HSFB2a(2)     ----------->HVH21               <---------LBD16  <---------At4g35610   <---------ARR14(2) -LBD16--------->ALFIN1       ------>MYB46(1)   --------->ATERF1(1)----------->HVH21  <------ZmHOX2a(1)   accggagatgtgctgctattgacagagcttccaaccacaagtttattgtctccgccgtggccgctgaggctgacctcgacacggaggaggacctggagca  23455500          --------->ORA47(1)          <---------RAP2.6(3)          ------>NtERF2         --------->DEAR3(1)         --------->RAP2.6(2)         --------->RAP2.3(2)        --------->RAP2.3(1)       ------>NtERF2       --------->ABI4(1)      --------->DREB2C(2)      <---------ALFIN1      ------->GAMYB      --------->DEAR3(1)     <------NtERF2     --------->ATERF1(1)     --------->DEAR3(2)     --------->DEAR4(2)     --------->MYB46(3)    --------->ABI4(1)    ------>NtERF2    <---------ATERF1(1)   --------->AtMYB61   <---------ALFIN1       --------->ANAC58   --------->DEAR3(1)     --------->ANAC58 <---------ATERF1(1)  --------->ANAC46 -------->ANAC58     ------>NtERF2                                                   ------>MYB46(1) -------->RAP2.6(2)  --------->LBD16                                                 ------>MYB83 -------->ANAC58    --------->DEAR3(1)          <----------DOF2                    <---------MYB46(2) -------->ANAC46   ------>ZmHOX2a(2)         --------->RAP2.6(2)                   <---------MYB111(1) --->ATERF1(1)   --------->ARR14(2)      --------->DAG2                            <---------MYB59 -->At4g35610    <---------ARR14(2)     ---------->DOF2                       <---------DAG2 ---At4g35610 ------>ZmHOX2a(1)   ---------->DOF2 <---------AtMYB61           <----------DOF2   gaccgccaccgccgtccttgatccgcccaagcctaagaaaggaaaagccgctttggttctcaagagagatagagtatgtgctttacctacttcaatttcg  23455600               <---------ICU4   -------->P                                     --------->MYB52(1)               --------->YAB1<---------ANAC58                            ---------->DOF2  <----------DOF2            <---------ANAC58    <---------ARR11(3)--------->GLK1(1)        --------- --------->TOE2(3)   <----------DOF2  ----------->HVH21            <---------GLK1(1)       ----------   cttcctttactcgtgaatcatcactttgtttgcttacccattgacagacaaggtctaagaggtttttggaaatccaaaagctaagggaaaccaaaaagga  23455700  Previous    Next  AGI:  At3g63480.1    Description:  kinesin heavy chain, putative. similar to PAKRP1 (PHRAGMOPLAST-ASSOCIATED KINESIN-RELATED PROTEIN 1), microtubule motor/ plus-end-directed microtubule motor [Arabidopsis thaliana] (TAIR:AT4G14150.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17660.1); contains InterPro domain Kinesin, motor region; (InterPro:IPR001752) Range:  from: 23451862    to: 23454981    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g63490.1    Description:  ribosomal protein L1 family protein. Identical to 50S ribosomal protein L1, chloroplast precursor (RPL1) [Arabidopsis Thaliana] (GB:Q9LY66;GB:Q9LWB4); similar to ribosomal protein L1 family protein [Arabidopsis thaliana] (TAIR:AT2G42710.1); similar to unknown [Populus trichocarpa x Populus deltoides] (GB:ABK96759.1); contains InterPro domain Ribosomal protein L1, bacterial-type; (InterPro:IPR005878); contains InterPro domain Ribosomal protein L1, 2-layer alpha/beta-sandwich; (InterPro:IPR016094); contains InterPro domain Ribosomal protein L1; (InterPro:IPR002143) Range:  from: 23455178    to: 23457330    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version