Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                  -----                                                                                               ------                                                                                               ------                                                                                              -------            --------->ZAT6                                                         ---------->DOF2  =        <---------MYB59       <---------YAB1                                      ===================       --------->ANAC55(2)  ----------->GT1                                       <------ZmHOX2a(1) <       --------->YAB1 <---------LBD16                                  --------->ANAC58    --------->ANAC58       --------->ANAC46 --------->LBD16                                --------->ANAC58    --------->ANAC58      <-------TEIL ---------->DOF2         ----------->GT1           ---------->DOF2    --------->ARR14(2) -------GLK1(1)  <---------YAB1       --------->MYB52(1)           --------->At4g35610  <---------ARR14(2)   ataccacatacataactctattaatgcggattataaaaaaaaacagagtgaaaatggcgattcaatagcagcaaagcaaggcgaggaaaggaaacgcacc  23447900                                                  <---------------------WRI1                                                  <------NtERF2                                                 --------->ANAC58                                                 ------>NtERF2                                                --------->RAP2.6(2)                                                --------->ATERF1(2)                                                --------->RAP2.3(2)                                                --------->RAP2.3(3)                                                <---------ATERF1(2)                                                --------->DEAR3(1)                                                --------->DREB2C(2)                                                --------->RRTF1(2)                                               <------NtERF2                                               <---------LBD16                            <----------                                               --------->ORA47(2)                     <-------TEIL                                               --------->RAP2.3(1)                   <------ZmHOX2a(2)                                               --------->ATERF1(1)                  --------->AGP1                                               --------->RRTF1(1)                   <---------ARR11(3)                                               --------->ERF1                       <---------GLK1(2)                                              --------->At4g35610                   <---------ARR14(2)                                              ------>NtERF2                         --------->ARR14(2)                                              <---------At4g35610               ------>ZmHOX2a(2)                                              <---------RAP2.3(1)             --------->ARR14(2)                        ------>ZmHOX2a(2)     <---------ATERF1(1)             <---------ARR14(2)             <---------ARR14(2)               <------NtERF2                --------->TOE1(1)             --------->ARR14(2)       <---------REM1(2)                    --------->TOE2(1)<--------            <------ZmHOX2a(1)     --------->LBD16--------->LBD16          ===================HOX2a_HOX2a  ---------->DOF2      <------ZmHOX2a(2)     <---------DEAR3(1)           =============HOX2a_HOX2a ---->MYB46(3)        --------->ARR11(3)     --------->DEAR3(1)           <---------LBD16 --------->ARR14(2) --->ANAC58 ===================HOX2a_HOX2a  <---------RAP2.6(2)           ==================HOX2a_HOX2a --->ANAC58 ==================HOX2a_HOX2a--------->ANAC58                 ------>ZmHOX2a(1) <-------- >TEIL---------->DOF2 <---------AGP1<---------ETT(2)                      --------->LBD16 <---------ARR14(2) ==================HOX2a_HOX2a   <---------ANAC46--------->ANAC58    --------->GLK1(1)------>ZmHOX2a(2) ======HOX2a_HOX2a    --------->AGP1--------->ETT(2)   --------->YAB1<---------ARR14(2)  <---------MYB52(1) ------ZmHOX2a(2)     <---------ARR11(3) --------->ANAC58    --------->MYB52(1)<------ZmHOX2a(2)  <--   cgatcaaagaaagaggattccatagatctatatttccgtcgacaaggccgccggcaataagaccaagggcgaattcctcggatccagatccgtttcttcc  23448000                                         <---------TGA1a                                         =======================================bZIP_DOF                                         =======================================bZIP_DOF                                         --------->O2                                         --------->TGA1a                                       ------>NtERF2                                      --------->LBD16                                <---------GLK1(1)                                --------->GLK1(1)                                                 <--                                <----------TaMYB80                                           --------                               ---------->TaMYB80                                      ------>ZmHOX2a(2)                               <---------ARR14(2)                                     <------ZmHOX2a(2)                           <---------LBD16                                           <---------ARR14(2)                          --------->ALFIN1                                           --------->ARR14(2)                        --------->ZAT2----------->HVH21                              <---------AGP1 <  <---------ANAC58      <---------At4g35610   --------->ANAC58                       --------->ARR14(3)  <---------ANAC58      --------->At4g35610   --------->ANAC58                       <---------ARR14(3) -ARR10                 <---------ZAT2--------->ANAC46               ---------->DOF2 <---------ARR11(3) -ANAC58       --------->MYB46(3)     --------->DEAR3(1)    <-----------HVH21        --------->ARR11(3) -ANAC58     <-----------GT1   --------->ARR14(2)          ------>ZmHOX2a(2)        --------->RVE1(1) ---------RAV1(2)      <---------ARR14(2)<---------O2     <------ZmHOX2a(2)      ---------->DOF2 <---   ccaggcgagtctattgaaccgctcggagctggggatttccccgacgagaggcaagtcgcgatcgtcagactgaaagtcgagcttaaagatctcgagattg  23448100                                         <---------RAP2.3(1)                              ------>NtERF2                             ------>NtERF2   <------NtERF2                                     ------                             --------->LBD16------>NtERF2                                      <-----                            --------->DEAR3(1)                                                <------                           --------->ATERF1(1)   --------->AtLEC2                       <-----------TCP11(1)                           <---------LBD16  --------->RAP2.6(2)                        ------>ZmHOX2a(2)                           <------NtERF2 ------>NtERF2                               --------->ARR14(2)                          ------>NtERF2<---------LBD16                               <---------ARR14(2)                         --------->ARR14(2)--------->DEAR3(1)                        <-----------ARR10                         <---------ARR14(2)<---------DEAR3(1)                       <------NtERF2                       <---------DEAR3(2)--------->LBD16                         --------->ATERF1(1)                       <---------ATERF1(1) --------->ATERF1(2)                   <------NtERF2-------        ---------->DOF2------>NtERF2 --------->ARR14(2)                         <---------ATERF1(1)        --------->MYB52(1)<---------ATERF1(1)------>NtERF2                     <---------DEAR3(1)     --------->At4g35610--------->ATERF1(1)<---------ATERF1(2)            --------->MYB52(1)  ------- -------ANAC46         <---------RAP2.3(1)--------->ATERF1(1)            <---------WRKY12   <-------- ->ARR14(2)           <---------RAP2.3(2)<---------ATERF1(1)       --------->ATERF1(1)<------ZmHOX2a(2) ------NtERF2         <---------DEAR3(1)<---------RAP2.6(2)  <---------LBD16 ------->GAMYB --------->MYB46(3) ------LBD16      <------ZmHOX2a(2)  <---------ARR14(2)<------ZmHOX2a(1) <---------WRKY38(1)<--------   gcggaagagctaaaggagagatcgacggctccggccatggttccggcggccatgtaaggagcatcgggagccagggcaacggaggcggatcggcccaccc  23448200       --------->ANAC58                                                       =======================       --------->ANAC46                          --------->ALFIN1             =======================HOX2a_HOX2a       --------->ANAC58                          <---------ANAC46             ------>ZmHOX2a(2) --->DEAR3(1)                                  <---------ANAC46              ======================== ----ALFIN1                                    --------->ALFIN1              <------ZmHOX2a(2) ---ALFIN1                                   <---------ANAC58                ========================HOX2a_HOX2a -->ANAC58                         <---------AHL20(2)                       --------->ARR11(3)      - -->ANAC58                         --------->AHL20(2)                       --------->ARR14(2)     <- -ALFIN1                          --------->AHL20(2)                        <---------ARR14(2)<------ZmHOX2a(1) -ATERF1(1)               <---------ARR14(2) <---------ANAC58    ----------->GT1       ---------->DOF2   ccttgatgcaagccatattggaatcggagattgggatttaatttttagggtgtgtgaagttgaattcttgtaaattgggatctggagaacaaaggaggag  23448300                                                                              --------------->AGL15                                                                       <----------DOF2                                                                     ------->TEIL             <---------YAB1                                        --------->ZAT14   <-----------GT1                                    <-----------RAV1(2)     <---------------AGL15 =====HOX2a_HOX2a                                  --------->ETT(2)<---------ZAT14 =====HOX2a_HOX2a                     <---------AHL20(2)         --------------->AtSPL8 ---------->GT1                      <---------AHL20(2)        --------->ARR14(2)       --------->MYB52(1) -----ZmHOX2a(1)   *TSS--------->ATHB12   <---------AHL20(2)   <---------ARR14(2)---------->DOF2   --   aggagttacttcaccattatagatttgattagaatgttttttattttcttatttcgacaggggcgaaactgtactttcaactcaaaagagtaagggtaat  23448400                                             <---------WRKY12                                           <-----------HVH21                                          --------->ANAC58                                          --------->ANAC55(1)                                          --------->ANAC58                                          --------->bZIP60(2)                                          <---------ANAC55(2)                                          --------->O2             <---------TOE1(3)            --------->ANAC46             <---------TOE2(3)            --------->TGA1a           --------->STY1(1)              <---------O2     --------->ANAC58                     <---------TGA1a     --------->ANAC58                ----------->HVH21   <---------ALFIN1                --------->YAB1                ----------->HVH21 ------->TOE1(1)--------->GLK1(2)  <---------ICU4           ------>NtERF2           <---------ANAC46   ctcggacactcccctaaggttctgagagccattctaaacatgacacgtcaactaatctctgaggcctatgacccatcttatttgggccttggaacaatat  23448500                                                                        --------->ICU4                                                                  ------->MYC3                                                                  <-------MYC2                                                                  ------->MYC2                                                                  <-------MYC3                            --------->ANAC58                     <---------O2  --------->YAB1                            --------->ANAC58                     --------->O2 <---------YAB1      ---                     <----------DOF2           --------->YAB1    --------->ANAC55(2)              <--                  ------>MYB83                <---------ATHB51   --------->ANAC46                <---                  ------>MYB46(1)             <---------ATHB12   ----------->GT1              <------                <---------MYB59  --------->MYB46(3)              <---------ANAC55(2)          -------                --------->MYB46(3)<------------ATHB5             <---------TGA1a             <-------               --------->ANAC46----------->RAV1(1)               --------->TGA1a             --------   gctggataaatctcattacccaactttgaatcgcaacaattgggcccaataatgtgttttcaaaaacacgtgaaatttttatcatcaaatttgaaattat  23448600                                                                ------>ZmHOX2a(2)                 <--          <---------WRKY38(1)                                  <------ZmHOX2a(2)            <--------          <---------WRKY12                                    <---------AGP1                ---------  <---------AHL20(2)                                          <---------ARR14(2)        --------->ANAC58 ------>AHL20(2)                                              <-----------ARR10         --------->ANAC58 -------AHL20(2)                                              --------->ARR14(2)     --------->ZAT18 ------AHL20(2)                                  <---------At4g35610       <---------PCF2 ---------->DOF2 ---AHL20(2)            <---------YAB1           --------->At4g35610    --------->ALFIN1--------->ANAC46 -->AHL20(2)  --------->YAB1             --------->ANAC58    <---------CCA1(2)       --------->ZAT14 --AHL20(2)--------->WOX13(1)            --------->ANAC58    <---------ARR14(1)      <---------ZAT14 ->ICU4  --------->WRKY18(1) --------->YAB1  <---------KAN4(2)--------->ARR11(3)     <---------ZAT18   ttatttaagtggtcaatgagattgttatgaataataaactgggaaggaatgtgctgaaacatcggatctggccagtggggctactagtacacgaaagtcc  23448700          <---------CCA1(2)     <---------At4g35610   <---------DEAR3(1)                 --------->LBD16 -------TOE1(2)                      <---------HSFB2a(2) -HSFB2a(1)                          --------->HSFB2a(2)         ----------->GT1 >HSFB2a(1) <---------YAB1   <-----------GT1               <<<<<<<<<<<<<<<<<LFY              --------   catgttcggctcatatcattgtcttacattttttctgttccagatttatagaattcgtattaaacaatggtagaaaataagctaatatttgtttgcagtt  23448800  Previous    Next  AGI:  At3g63460.1    Description:  WD-40 repeat family protein. similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT1G18830.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN82123.1); similar to hypothetical protein OsI_026226 [Oryza sativa (indica cultivar-group)] (GB:EAZ04994.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40745.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943); contains InterPro domain WD40 repeat (InterPro:IPR001680) Range:  from: 23441619    to: 23448319    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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