Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                          --------->ERF1                                                        --------->RAP2.3(1)                                                        --------->ORA47(2)                                                        --------->ATERF1(1)                                                       ------>NtERF2                                                       <---------ATERF1(1)                                                      --------->ANAC58                                                      --------->O2                                              ------>NtERF2                                             <---------ALFIN1                                            --------->ATERF1(1)                                            <------NtERF2 ------>NtERF2                                           <---------ATERF1(1)                                           ------>NtERF2--------->DEAR4(2)                                          ----------->HVH21                                          --------->DEAR3(1)               <-----------RAV1(1)       --------->RAP2.3(1)             <---------MYB52(1)          <------NtERF2--------->ANAC58             <----------DOF2            <---------ATERF1(1)  ---------->CDC5          ===========================HOX2a_HOX2a      --------->ANAC46          ------>ZmHOX2a(2)             <---------DEAR4(2)--------->ABI4(1)         ============================HOX2a_HOX2a    <---------ALFIN1                    -------->P  =         <------ZmHOX2a(2)              <---------RAP2.3(1)<------NtERF2              ------>ZmHOX2a(1)        --------->ARR14(2)     --------->MYB52(1)  <---------REM1(2)           <--------P           -        <---------ARR14(2)    ------>ZmHOX2a(1)  --------->ANAC46  <----------DOF2    ===============    --------->LBD16    <--------P      <---------DEAR3(1)--------->RAP2.6(2)  <---------MYB52(1)   --   <---------ANAC46   <-------GAMYB   --------->ATERF1(1)--------->RAP2.3(2)  --------->At5g28300 ---  <---------LBD16   <------NtERF2     --------->At4g35610--------->DEAR3(1)<---------LBD16        <-- ------>KAN4(2)<---------AtMYB61      <---------At4g35610--------->RAP2.3(3)--------->LBD16   -------   cattcccgtggatccctttggtggggttagtcctaagggaagcggcgacaccctccacgccgcccagcgcttggatgcccggtaagtccttacccttcat  23420900                                                                        <---------ZAT18                                                                      <---------At4g35610                                                                      --------->At4g35610                                                                      <---------LBD16                                                                     --------->MYB52(1)                                                                    <---------ALFIN1                                                                   ----------->HVH21 ===================================HOX2a_HOX2a                   <-----------HVH21 ----->ZmHOX2a(2)                                         <----------DOF2 ======HOX2a_HOX2a               --------->TOE1(2)       ------>ZmHOX2a(2)                 <------ZmHOX2a(1) ------->GLK1(1)                --------->ANAC58         <---------ICU4 --------->LBD16--------->REM1(2) ------>ARR11(3)                --------->ANAC58       --------->ARR11(3)             --------->ALFIN1 -------ARR11(3)             <------ZmHOX2a(1)         <---------ARR11(3)           <---------ANAC46 -->YAB1                     ===================================HOX2a_HOX2a        <---------DEAR3(1)   gatctccacaagttgttcttgatcaatggcaggaacgtaagagagaggcatagagttgatctttgctccctcaccggactcgagggctgtgtaggagaga  23421000                                   --------->LBD16                                  <---------ANAC46                                                 --                          --------->WOX13(1)                                                       --                        ===============================HOX2a_HOX2a                                 --                        <------ZmHOX2a(2)                                                   ---------                <---------ARR14(2)<---------ANAC58                                          ---------             <---------TOE1(3)    <---------ANAC58                                       <---------SPL7             <---------TOE2(3)   <---------LBD16                                        <---------ANAC46         <---------At4g35610  <---------ANAC58  ------>ZmHOX2a(1)                      <------NtERF2         ----------->RAV1(2)  <---------ANAC58 --------->TOE1(3)                       <---------At4g35610         --------->At4g35610 <---------ICU4    --------->TOE2(3)                       --------->At4g35610   gagagagaggcatctgaggttttgggatcaatccttgcgggaactatctccttaacaagagagagcatagccctcatagagtagatggcagcgtaggcaa  23421100     <---------ALFIN1     --------->ANAC58     --------->ANAC46     --------->ANAC58                 <---------AtMYB61   <---------ATERF1(1)                <---------TOE1(3)     --------->YAB1   ------>NtERF2                      <---------TOE2(3)   --------->ZAT14  --------->DEAR3(1)                  --------->DAG2 <---------ZAT14 ------->ANAC46                     <--------P       --------->ZAT14 ------->ANAC58                  --------->ALFIN1    --------->ZAT18         --------->PCF2 ------->ANAC58            --------->ALFIN1          <---------ZAT18  <---------ANAC58             -- >ANAC58               <---------TOE2(3)         --------->DAG2       <---------ANAC58 <----------DOF2 >ANAC58 ----------->RAV1(2)  <---------AtMYB61 ---------->DOF2--------->YAB1--------->PCF5    <-----   aacgccaacgcctctgggccttgttgaggctggaggtggtaaggttgagcaaaagtgcactgtaatcatattccttgaggtccctcatgctttatttgtg  23421200                                                            <---------ANAC46                                                            <---------ANAC58                                                            <---------ANAC55(1)             <--------                                                            <---------ANAC58              --------->ATHB12                                                           --------->MYB52(2)            --------->ICU4                           <---------GLK1(2)           ----------->GT1             ---------->DOF2   ---------->DOF2     ---------->DOF2                 <---------ZAT6           --------->ANAC58 -------->DOF2 --------->HSFB2a(2)                   <---------ANAC46           --------->ANAC58 ----ANAC46    <---------HSFB2a(2)                  --------->ALFIN1        --------->ZAT6<---------ICU4   tgaaagaaagagagtttttagaaggaaaagagtctcgctctctctcaactaaatgtggtgttacttgtaagacacttaagactcgcaaagaatgatttct  23421300                                                       <------------CBF                                                      --------->ATHB12                                                     <---------YAB1                                                  <----------DOF2                                                <------NtERF2                             <---------ANAC58                                               <------NtERF2                              <---------ANAC46                                               <---------RAP2.6(3)                        <---------ANAC58                                               ------>NtERF2                          <---------ARR11(3)                                              --------->DEAR3(1)                     --------->RVE1(1)                                              --------->RAP2.6(2)                 <---------AHL20(2)                                        <---------ARR14(2)                   --------->AHL20(1)                                        <------------CBF                     <---------AHL20(1)                               <---------AHL20(2)<----------DOF2             <---------AHL20(2)                     --------------->AtSPL8  <---------RAP2.6(2)             --------->AHL20(2)  ----                   <---------ANAC46  <---------ANAC55(2)               <----------DOF2--------->ARR11(3)                  <-------TEIL --------->AHL20(2)<---------DAG2   <---------At4g35610--------->CCA1(1)               --------->HSFC1(2)    --------->ANAC55(2)<---------WOX13(1)--------->AHL20(2)   ------ -GLK1(1)      <---------HSFC1(2)  *TSS --------->ARR14(2)       <-----------GT1 --------->AHL20(2) <   ctctctctaataccctaagcttcgtggtactatttaaatccgtattggccgccttttgattgctatttatctgctttaaaatattaaatatctcgtgtaa  23421400                                   --------->MYB46(3)                                 <---------ARR14(2)                              --------->ALFIN1                             <-------GAMYB                             <------NtERF2                                             <------NtERF2                            <---------ORA47(2)                                        --------->DEAR3(1)                            <---------MYB46(3)                                        --------->RAP2.6(2)                           --------->ALFIN1                            <------ZmHOX2a(2)                       <-----------RAV1(2)                             ==============================                  <---------ARR11(3)                                   =============HOX2a_HOX2a<-----         ------>ZmHOX2a(1) <---------DREB2C(2)                       --------->WOX13(1)<---------At4g35610  <---------ANAC58--------->ARR11(3)                                <---------ETT(2) --------------->AtSPL3  <---------ANAC58<---------AHL20(1)                               --------->DDF1    --------->PCF2 ------->GT1      <---------ICU4 --------->ARR14(2)      --------->ANAC46            --------->ATERF1(1) ---->DOF2<---------TOE1(2)<---------DEAR3(1)            --------->ANAC58    <------ZmHOX2a(1) ------ -----------GT1   --------->AHL20(1)                     --------->ANAC58---------->DOF2<---------ALFIN1   agtaacttgtcctagtttaatattttcaggcggtggaaccactcagaaacgttgtaaacacgaagtcatgtcgatcaaaggacatgggccgcacatcctt  23421500                                                      ----------------->AGL1                                      <---------MYB52(1)  ---------->DOF2                            <---------ANAC58        --------->ZAT18            --------->GLK1(2)                            <---------ANAC46        <---------ZAT18           <---------ARR11(3) =HOX2a_HOX2a               <---------ANAC58  <---------ALFIN1                --------->ARR11(3) -----DOF2            <---------MYB52(1)     --------->MYB46(3)   ----------->GT1               ----- >ZmHOX2a(1)        <-----------RAV1(1)     >>>>>>>>>>>>>>>>>LFY  <---------ZAT6      ----------->GT1   ttgtacttgtgttttgacttatctgttgtctcgtgtttcggtttggaaccactgtgccctaaaagagagagttaatctgagattttggtagtaatttcta  23421600                                                                     ------>MYB46(1)                                <------NtERF2                        ------>MYB83                                <---------MYB52(1)                   -------->P      --------->ANAC58                               <-----------HVH21             --------------->AtSPL8  --------->ANAC58                               <---------RAP2.6(3)          <---------ANAC58        --------->SPL7                              --------->RAP2.6(2)           <---------ANAC46        --------->SPL1(2)                           --------->ANAC58                 <---------ANAC58      <------NtERF2                           --------->ANAC58                <-------TEIL         --------->ZAT18                   <---------ANAC46                       --------->ALFIN1      <---------ZAT18                   <---------ANAC58                     <---------ANAC58   --------------------->WRI1       --------->SPL7 --------->ZAT18                   <---------ANAC46  <---------ANAC58     <---------SPL7<---------ANAC58                     <---------ANAC58  <---------ANAC58  --------->At4g35610--------->ALFIN1             <------ZmHOX2a(1)<---------MYB59<---------SPL7 ----->DOF2        --------->ALFIN1            <------ZmHOX2a(1)   <---------MYB111(1)          -----   aagcagccgtatgatgtaatggtgtggacaagccgtcattgtagaatgaggaggaatagcgtgcgtgtaccaacttgcttagtccgcacggacaaatgaa  23421700                                                                                  --------->WOX13(1)                                                                       <---------ANAC46                                                                       ----------->GT1                                                                       <------MYB46(1)                                                                      --------->MYB111(1)                                                                      --------->MYB46(2)                                                                      <---------AtMYB61                                                                      --------->MYB59  ----------->GT1                 --------->DAG2            <<<<<<<<<RAP2.2    ------>MYB83     <---------ARR11(3)         --------->ARR14(2)               <---------YAB1 --------->ANAC46      --------->ARR11(3)         <---------ARR14(2)----------->GT1<---------TOE2(3)   ------>MYB46(1) --------->CCA1(1)   <--      <---------ANAC46---------->DOF2<------ZmHOX2a(1) <---------ALFIN1<------MYB83    <---------ANAC55(2) ----->DOF2     ---------->DOF2  ---------->DOF2 ------->TEIL -------->P    --------->YAB1        ---   aagaaatggcgaatatagtaaagcgaaagaagaaaaaaaggatttagattgaatcttccacaccaacttggtttggtataatatctatcaagtgaaattt  23421800  Previous    Next  AGI:  At3g63380.1    Description:  calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA12). Identical to Putative calcium-transporting ATPase 12, plasma membrane-type (ACA12) [Arabidopsis Thaliana] (GB:Q9LY77); similar to ACA10 (autoinhibited Ca2+ -ATPase 10), calcium-transporting ATPase/ calmodulin binding [Arabidopsis thaliana] (TAIR:AT4G29900.1); similar to calcium-transporting ATPase, plasma membrane-type, putative / Ca(2+)-ATPase, putative (ACA13) [Arabidopsis thaliana] (TAIR:AT3G22910.1); similar to ACA8 (AUTOINHIBITED CA2+ -ATPASE, ISOFORM 8), calmodulin binding [Arabidopsis thaliana] (TAIR:AT5G57110.2); similar to type IIB calcium Range:  from: 23417586    to: 23421335    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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