Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                       <---------SPL7                     ----------->HVH21                     --------->LBD16                            <------ZmHOX2a(1)                   <---------LBD16                            --------->ANAC55(2)                 <-----------GT1                              <---------TOE2(3)           <---------YAB1   ------>NtERF2                     <---------TOE1(3)                    --       <---------ANAC58  <---------ATERF1(1)                  <---------ANAC55(2)               ----- >LBD16<---------ANAC58--------->SPL7                   <---------TOE2(3)                     -------   aacaagttagcttgtgattttgccggacgacgacaattgaatcaaatcaaatcaaatcgaggttaaggaacaacaagagcaaggagagaacaaggtttta  23370200                                                                <---------YAB1                                                              --------->YAB1                                   <-----------GT1        <---------ICU4                               --------->ARR11(3)        <---------YAB1        --------->DEAR3(2)         --------->bZIP60(2)   <---------ARR11(3)      --------->YAB1         --------->MYB52(1)        <-------TEIL  <---------TOE2(3)                <---------ICU4         --------->SPL7     <---------HSFC1(2) --------->TOE2(3)             --------->ICU4        <---------SPL7     --------->HSFC1(2)<---------ANAC46             --------->YAB1         --------->ANAC46 -------->DOF2<------NtERF2  <---------YAB1        <---------YAB1         --------->LBD16 ---->YAB1   *TSS    <-----------GT1            <---------AHL20(2)       <-----------------AGL1    <- -->AHL20(2)<---------DEAR3(1)--------->YAB1   --------->AHL20(2) <---------GLK1(2)  <----------DOF2   ataaagaagctacgtcgtcgtttttacgtttatgatattactaaaccgattttataatcatcatttatgattctcccccgtaccggcctttttatgtttt  23370300            <----------DOF2       --------->At4g35610       <---------At4g35610                                   <-----------HVH21      <---------MYB46(3)                                    <---------TGA1a     <--------P   --------->ANAC58                          --------->TGA1a    <---------ANAC58                                       ------->MYC3    <---------ANAC58--------->ANAC46                       <-------MYC3    <-------GAMYB --------->ANAC46      <----------DOF2<-------TEIL                 --------->HSFB2a(2) ---------DOF2    --------->ANAC58      ==============================bZIP_DOF      <---------HSFB2a(2)   tctttgggttgctgctttccacacaaaatatcaaaacgttttcttttcatcaacacatacacatgtgagagaaattgacaccaagtctagaagaatacaa  23370400                              <---------CCA1(2)                           ------>ZmHOX2a(1)                         ------>ZmHOX2a(2)               --------->KAN4(2)              <----------TaMYB80                                                     <----------DOF2              <---------GLK1(1)   <-----------------AGL1                       <---------YAB1--------             <---------ARR14(2)<---------ARR11(3)                             <-----------GT1--------             --------->ARR14(2)--------->ARR11(3)                      ----------->GT1    <----------   acttatgtcgatttggatattctctgatcctaatatctctattttggcaacttcatcaaatttttaaacaaaaatgttattttcattcttttttacctca  23370500                           <---------AHL20(2)                       <---------YAB1                      --------->AHL20(1)                      <---------AHL20(2)                     --------->YAB1                     --------->AHL20(2)                    <---------YAB1       <-----------GT1<---------AHL20(1)         ------>ZmHOX2a(2)            ------------>CBF ->TOE1(3)  --------->ARR14(2) --------->ARR11(3)--------->YAB1     <---------YAB1     <---------GLK1(1) ->TOE2(3)  <---------ARR14(2) <---------ARR11(3)----------->GT1  --------->YAB1       --------->GLK1(1) -GT1  <---------AHL20(2)  --------->AHL20(2)<---------YAB1      <---------YAB1      --------->LBD16   aaatcgtatttacatatatgctattatatttaaaatctttgtgagttttgatcgtaacatgaaaacgattataaaacgattacaatccgaaatccctctc  23370600                                                                                                    <                                                                                                -----                                                                                                <----                                                                                                -----                                                                                               <-----                                                                                               <-----                                                                                              <------                         --------->ANAC46                                                 <---------ANAC58                       <---------ANAC58                                                   <---------ANAC58                  <--------ATHB1                                                         <------MYB46(1)                  -------->HAHB4                                            <------MYB46(1)   <------                  --------->ATHB12                          <---------HSFC1(2)           <---------MYB46(3)                  <---------ICU4                            --------->HSFC1(2)           <------MYB83                 <---------YAB1                             --------->HSFB2a(1)        <---------WOX13(1)                 --------->ICU4                            --------->ANAC58 <------MYB83<---------AtMYB61               --------->YAB1                          <---------------------WRI1     --------->ARR14(2)              <---------AHL20(2)                <---------GLK1(2)           --------->HSFB2a(1)------             --------->AHL20(2)                --------->HSFC1(2)          <---------TOE2(2)  <------             <---------AHL20(1)                <---------HSFC1(2)       <---------ANAC55(2)   -------             --------->AHL20(1)               --------->ANAC58         <-------TEIL   <---------ARR14(2)        <---------ANAC46--------->LBD16       --------->ANAC58    ---------->DOF2 <---------LBD16<---      ----------->GT1 <-----------------------TaNAC69(2)   --------->ANAC58<---------TOE1(2)  <------     <---------DEAR3(1)<---------ANAC58     <---------ALFIN1<---------HSFB2a(1)<-------TEIL  <-------   tcaagggatggcgaatataatgattccgagcaagagaccgcgagccccaagcttctctgagaagcatccaaagtacgtaggttcttcggattggttgccg  23370700     <----------ID1   ---------->DOF2                                                           <---------ANAC46 ------NtERF2                                                                <---------bZIP60(2) ->NtERF2                                                              --------->TGA2(2) -----RAP2.6(3)                                                       <-----------HVH21 ---->LBD16                                                           <-----------TGA1 ----ATERF1(2)                                                       --------->ANAC58 ----RAP2.6(2)                                                       --------->ANAC46 ---ANAC58               --------->ZAT14                          --------->TOE2(2) ---ANAC58               <---------ZAT18                    --------->YAB1----------->HVH21 --->ATERF1(2)         --------->At4g35610         --------->ARR14(2)--------->bZIP60(2) ---ANAC46             <---------At4g35610         <---------ARR14(2)--------->ANAC58 -->RAP2.6(3)          <---------ZAT2           <---------ANAC58--------->GLK1(2)             ------- ---NtERF2--------->ANAC58          <---------ANAC58  --------->HSFB2a(2) ----------->TGA1    <------ ---LBD16 --------->ANAC58          <---------ANAC58  <---------HSFB2a(2) --------->ICU4  <---------- --ATERF1(1)           --------->ZAT2           <---------ANAC58<-----------ARR10<------ZmHOX2a(1)<--   gcagagaaagacaaggctcaagttcagctcactaacttccttgagctatgtcgtttctgcaagaagaatctacgtcatgacgaggacgttttcatgtacg  23370800                                                               ----------->GT1                                                               <---------ZAT6                         --------->At4g35610            <---------ANAC46                         <---------At4g35610            <---------ANAC58 >TEIL    <---------ANAC58          <---------YAB1      <---------ANAC58 ---LBD16 <---------ANAC58      --------->CCA1(2)   <----------DOF2                         <-------- -----AtSPL3  <----------DOF2  --------->ARR11(3)--------->GLK1(2)     <---------TOE2(3)    <-------- ---------HVH21     ------>ZmHOX2a(1)           <---------GLK1(2)   <---------YAB1          <--------   ggtcagttttttgcttcttttcctctctgcttagatatatcattgttagggattctttgtgtgtattgttactatggttttcatttgtgaaattccttgt  23370900                                                                       <----------DOF2                                                                   --------->TGA1a                                                                   <---------ANAC46                                                                   <---------TGA1a                       <------NtERF2                               --------->O2             <---------GLK1(2)                                     --------->bZIP60(2)     ----------->RAV1(2)                                           <---------O2               -------     --------->At4g35610                                           ===============bZIP_DOF    -------   ------->GAMYB      ------>NtERF2                                ===============bZIP_DOF  ---------  --------->MYB46(3)<---------ANAC46                            ----------->HVH21  --------->HSFB2a(2) -ANAC46     --------->ARR14(2)                        --------->At4g35610         <---------HSFB2a(2) -ANAC58     <---------ARR14(2)           <---------ZAT14   <---------ANAC58   --------->GLK1(1) -ANAC58    <---------At4g35610           --------->ZAT14   <---------ANAC58   <---------GLK1(1)   tgcaaccatctggcagatacttgggggcattctgttcaaaacaatgcagagcaaaacagatggcatgcgacgtctttagagatttctcgagacagaaagc  23371000                                                                          <---------ICU4                                                                       --------->YAB1                                                  --------->YAB1       <---------ICU4                                                  <---------ICU4      <---------YAB1                                             ------>ZmHOX2a(2)      <---------ICU4                                            --------->GLK1(1)       --------->YAB1                                            <------ZmHOX2a(2)      <---------YAB1                                            <---------GLK1(1)    <---------ICU4                                           --------->ARR14(2)    --------->YAB1      --------->AHL20(2)                                           <---------ARR14(2)   <---------YAB1    <----------DOF2                                           <---------ARR11(3) <---------ICU4   <---------YAB1                                           --------->ARR11(3) --------->YAB1 <---------ICU4 -->ANAC58                                 <---------AGP1  <---------ICU4 --------->YAB1 -->ANAC58                                 <-----------ARR10 <---------YAB1 <---------YAB1   -------- ->DOF2               ---------->DOF2     <------ZmHOX2a(1)--------->YAB1<---------YAB1    <---------YAB1   aaatgttaagaagggaagaacatccaaagatgagggattagataggatctcatcatcaccatcatcatcatcatcatcatcatgcttttatatatgattt  23371100  Previous    Next  AGI:  At3g63220.1    Description:  kelch repeat-containing F-box family protein. Identical to F-box/Kelch-repeat protein At3g63220 [Arabidopsis Thaliana] (GB:Q9M1W7;GB:Q3EAF6); similar to kelch repeat-containing F-box family protein [Arabidopsis thaliana] (TAIR:AT1G16250.1); similar to unknown [Populus trichocarpa] (GB:ABK93324.1); contains InterPro domain Kelch repeat type 1 (InterPro:IPR006652); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain Kelch related (InterPro:IPR013089); contains InterPro domain Galactose oxidase, beta-propeller (InterPro:IPR015916); contains InterPro domain Galactose oxidase/kelch, beta-propeller (InterPro:IP Range:  from: 23368367    to: 23370213    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g63230.1    Description:  senescence-associated protein-related. contains InterPro domain Protein of unknown function DUF581 (InterPro:IPR007650) Range:  from: 23370608    to: 23371097    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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