Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                              <---------DAG2                   <---------WOX13(1)                                       <----------DOF2                 <---------ICU4                                            <---------ANAC46                 --------->ATHB12                                          <---------ANAC58                <---------YAB1                                             <---------ANAC58             <---------YAB1                                           <---------DEAR3(2)             --------->ICU4                                           <------MYB46(1)    <-----------ARR10                                                <---------DEAR3(1)    <---------ARR14(2)                  --------->LBD16              <---------DREB2C(2)    --------->ARR14(2)            ------>ZmHOX2a(2)                  <---------MYB46(3)    <---------ARR11(3)           <------ZmHOX2a(2)      <-----------HVH21 <------NtERF2    --------->ARR11(3)           --------->GLK1(1)     ================================bZIP_DOF    --------->GLK1(2)            <---------GLK1(1)     <---------ANAC58  ------>NtERF2   <---------GLK1(2)            <---------ARR11(3)     <---------ANAC46<-------GAMYB               -- -------->YAB1  --------->ICU4  --------->ARR11(3)     <---------ANAC58<---------MYB52(1)         <-- ------>AtLEC2--------->YAB1   --------->GLK1(1)       ========================MYC_MYB            <-- ------>ANAC46<---------ICU4   <---------GLK1(1)       <---------O2  --------->MYB55(2)<---------MYB52(1) --ARR14(2)--------->YAB1--------->MYB52(1)            <---------TGA1a<------MYB83  <---------ATHB12   aagcagaatcttgtcatcatgattgagtaacagagatctctccagagaagaagagaggcgtgagagaacagtcggtggctttttcaatcgtttgccctca  23334800                                               <---------MYB46(3)                                            --------->ARR14(2)                       --------->YAB1           ----------->RAV1(2)              <---------ARR14(2)                      <---------ATHB12          -------->P                   <---------ZAT2                               --------->ICU4        ------>ZmHOX2a(1)              --------->At4g35610                  ------->TEIL       <---------MYB59              ---------->DOF2                         --------->GLK1(2)  <---------ICU4                   --------->YAB1   <---------ANAC58        --------->ARR14(2) ------->YAB1                     <---------ATHB12  <---------ANAC58        <---------ARR14(2)     <- -------ATHB12                <---------ATHB12------>ZmHOX2a(2)          <---------ATHB12       <---- -------ATHB51  <---------ANAC46--------->WOX13(1)  <---------ANAC46     --------->MYB46(3)  <-------   ataataagtcctaacctgaggtatacatccgaatcaatgaaagctggatcggttgcgagagagtccatttctccaacgaatctgcaatgaagatgatgat  23334900                                                                                          --------->TOE1(3)                                                                                          <---------MYB59                                                                                          --------->TOE2(3)                                                                               ------>ZmHOX2a(1)         ----------->GT1                                                      <---------------AGL15    --------->AHL20(2)                            <---------ZAT6    --------->ZAT18     ------->TEIL    <---------AHL20(2)                            ----------->GT1--------->At4g35610   <---------ARR11(3) ------TEIL                                 ------->TEIL       <-----------RAV1(2)<---------ATHB12 -----ANAC46   <----------DOF2           <---------ANAC55(2) --------->ANAC46----------------->AGL1 --YAB1  --------->YAB1                 <-----------------------TaNAC69(2)   ----------------->AG   gtgcataaaaatggtaactttgaatagggttttgaaatagaagacgtatgtagagtaaatttcaagcaggtgaactaattcctaatcaagaacctaaacc  23335000                   -------->P                   ------>MYB46(1)                   ------>MYB83                  --------->MYB55(1)                 <---------MYB55(2)                 <---------MYB46(2)                 <---------MYB59                                      --------->HSFC1(2)                 --------->MYB46(3)                                   <---------HSFC1(2)            <                 <---------MYB111(1)                          --------->ALFIN1                   <---                 <---------MYB111(2)                       --------->DAG2             --------->ALFIN1               -------->P        --------->GLK1(2)        ---------->DOF2          --------->DAG2<---               ------>MYB46(1)   --------->ARR11(3)   <------ZmHOX2a(1)           ---------->DOF2<---               ------>MYB83     <---------GLK1(2)   --------->MYB59   --------->At4g35610        <---   ctctctatatgtctccctacctaccaagtaccaagaatcttgagagtcaagaattaggaataaagtggaagaagcttacgagaataaagtggaagaagtt  23335100                                                    --------->ABI4(2)                                                    ------>NtERF2                                                   <---------DEAR3(1)                                                 <---------ATERF1(1)                                                 --------->LBD16                                                 ------>NtERF2                <---------ARR14(2)              <---------DEAR3(1)                --------->ARR14(2)              --------->ANAC46               --------->HSFB2a(1)       ------>ZmHOX2a(2)    <---------ZAT18                     <------ZmHOX2a(2)    --------->ZAT18                    <---------AGP1 <---------ANAC58   --------->LBD16    <---------ARR14(2) <---------ANAC58 <---------LBD16      --------->AGP1 <---------ANAC46 <-------TEIL         --------->ARR14(2)                        ----------->HVH21 -------TEIL   --------->HSFC1(2)      <-----------ARR10                     <---------ZAT14 ---MYB83     ----------->ARR10 ---------->DOF2<---------LBD16               <---------At4g35610 ------MYB46(3)<---------HSFB2a(1)     --------->ARR11(3)                 <---------At4g35610 ------DEAR3(2)<---------HSFC1(2)      <---------ARR11(3)                <-----------GT1         ---- ---MYB46(1)  <---------------AtSPL8  <---------CCA1(2)                  <-----------RAV1(1) --------   ggttcgtgaactagagaaggtccggagaatggaagaaagcagatctatctccggcgcttctccattgttttttttttgctgctctgaagcttagaagcta  23335200                                                                       <---------AHL20(2)                                                                    --------->AHL20(2)                                                                    <---------ICU4                                                                    --------->ATHB51                                                                    <--------ATHB1                                                                    <---------AHL20(2)                                               <----------DOF2     --------->ICU4                                           <-----------GT1       --------->YAB1                                         <------------CBF       <---------AHL20(2)                                        -------->ATHB1          --------->AHL20(2)                                        <---------ICU4     --------->AHL20(2)                                        --------->ATHB12   <---------AHL20(2)      ------>NtERF2                     --------->ATHB51   <---------AHL20(1)      --------->LBD16                  <---------YAB1 <---------AHL20(2)                            -     --------->RAP2.6(2)               --------->ICU4 <---------AHL20(1)  <---------TOE1(3)         < ------>DOF2          >>>>>>>>>TBF1 ------------>ATHB5--------->AHL20(2)  <---------TOE2(3)       --- ->At4g35610          *TSS   ---------->DOF2  <---------DAG2   --------->AHL20(2)        <---------AHL20(2)   aaagaagccgcgaagaattgtgaagaagaaggaaagtttccattattgccttttattttattttatttaataatttaagggtttttgattttaaaatgaa  23335300                                                                                                   --                                                                                                   <-                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                                <----                                                                                             <-------                                                                                            <--------                                                                                            ---------                                                                                          --------->MYB55(2)                                                                                          <---------MYB46(3)                                                                                         <---------AtMYB61                                                                                        <---------ABI4(1)                                                                                        <-------GAMYB                                                                                       <---------MYB46(3)                                                                                   ----------->HVH21                                                                                 <---------At4g35610                                                                                 --------->At4g35610                                                                                 <---------ZAT2<-----       <---------AHL20(2)                                                        --------->ZAT2------       <---------ICU4                                                   <------NtERF2 <---------DEAR3(1)      --------->AHL20(2)                                               ------>NtERF2  <---------ANAC46    --------->YAB1                                                     <---------DEAR3(2)--------->ALFIN1   --------->ICU4                              <---------ANAC46       <---------At1g77200<---------DEAR3(1)   <---------YAB1                             <---------AtMYB61       <---------DEAR3(1)<------NtERF2 --------->YAB1                             --------->ALFIN1        <-----------HVH21 <---------DREB2C(2) <---------ICU4                           <---------bZIP60(2)      --------->DEAR3(1)<------NtERF2 -- -------->ICU4          <------ZmHOX2a(1) <---------ANAC46       <---------At5g28300 <---------ABI4(1) ---------YAB1      ---------->DOF2     <---------ZAT14        <---------ZAT14   ----------->RAV1(2)< ------>YAB1    ---------->DOF2     <------ZmHOX2a(1)          --------->ZAT14 <-----------RAV1(2)---   taataataataaatacaaaaaagaaaggacagaaggaaggagtgatgtgtggtagagagagacagttcaccgtcggcgagtccagctggcggtggtggga  23335400      <-----------HVH21 ------->DEAR3(1) --------ABI4(2) ----->At4g35610 ------At4g35610           --------->ATERF1(1) ----->PCF2               --------->At4g35610      <---------AHL20(2) ------ATERF1(1)          <---------At4g35610     <---------AHL20(2) -------TCP11(1)          <---------ATERF1(1)     --------->AHL20(2) --MYB46(3)             --------->ZAT14          <---------YAB1 -ANAC46                ------>NtERF2          --------->ATHB51 >ALFIN1   --------->TOE2(3) ------>NtERF2     <--------HAHB4 ----PCF2  --------->TOE1(3)--------->DEAR3(1) <---------ICU4 --->ATERF1(1)          <---------ZAT14       --------->ICU4 ------->ZAT18   --------->YAB1               <---------YAB1                                 <------- ---------ALFIN1<---------ATHB12         <-----------GT1                               ----------->GT1 ------>ATERF1(1)<---------ICU4      <----------DOF2                         <----------DOF2<--------   gcccaccgtgtcaccttaatcatcgctgcgctgccctgtcttttttccattattaatttttagcaagaagaagactgggctttctaaattagttattaat  23335500                         <---------ANAC46                     <-------GAMYB                   <---------TOE1(3)              <---------MYB46(3)           <---------ANAC58           <---------ANAC46                    <---------ANAC46                                   <-- <----------DOF2   <---------TOE2(3)    <-----------TGA1                <---------AtLEC2        ----- --AHL20(2)<---------ANAC58       <----------DOF2              --------->TOE2(3)                *TSS -YAB1  <----------DOF2<---------ANAC46--------->YAB1          --------->TOE1(3)   <---------GLK1(1)   gggctttgggctttcgtggttagggttgtgtaggggcttaatcgtcatttcggagatagaataaaccctaatctccatggatgggctctccgatgtttgt  23335600                                                                              --------->YAB1                                                                       --------->At4g35610                                                                   --------->ANAC58                                                                   --------->ANAC58                                               <---------ANAC58    --------->ANAC46                                               <---------ANAC58   ------->TEIL<--------ATHB1                                          --------->ATHB12     --------->ANAC58                                          <---------ICU4   <-----------HVH21 --------->ICU4 <--------                                   ---------->DOF2         <-----------TGA1  <---------ATHB12 --------DOF2                 --------->AHL20(2) ------>NtERF2 --------->ANAC58<---------GLK1(2) <--- ----->ID1                 --------->YAB1<---------YAB1   --------->YAB1 <------ZmHOX2a(2) ----------   ctttttgatttttgaaatttgattttcaaaaataaactaaagcatcattgcctcccattatcgtcacgcacgcagatcaatgattctctcactctgcttc  23335700  Previous    Next  AGI:  At3g63120.1    Description:  CYCP1;1 (cyclin p1;1); cyclin-dependent protein kinase. Identical to Cyclin-U3-1 (CYCU3-1) [Arabidopsis Thaliana] (GB:Q8LB60;GB:Q9LYB0); similar to CYCP4,1 (cyclin p4,1), cyclin-dependent protein kinase [Arabidopsis thaliana] (TAIR:AT2G44740.1); similar to unknown [Populus trichocarpa] (GB:ABK92673.1); contains InterPro domain Cyclin (InterPro:IPR006670); contains InterPro domain Cyclin-related (InterPro:IPR013763); contains InterPro domain Cyclin-related 2 (InterPro:IPR013922); contains InterPro domain Cyclin-like (InterPro:IPR011028); contains InterPro domain Negative regulatory factor PREG (InterPro:IPR012389) Range:  from: 23333931    to: 23335222    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g63130.1    Description:  RANGAP1 (RAN GTPASE ACTIVATING PROTEIN 1); RAN GTPase activator. similar to RANGAP2 (RAN GTPASE ACTIVATING PROTEIN 2), RAN GTPase activator [Arabidopsis thaliana] (TAIR:AT5G19320.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN73875.1); similar to Ran GTPase activating protein [Medicago sativa subsp. x varia] (GB:AAF19528.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22481.1); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611) Range:  from: 23335596    to: 23337888    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version