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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<----
<-----
----------->
HVH21
<------
--------->
O2
<------
--------->
TGA1a
<---------
MYB52(1)
<---------
O2
--------->
At5g28300
--------->
bZIP60(2)
<-------
GAMYB
<---------
TGA1a
<---------
DEAR3(2)
--------->
ANAC58
<---------
MYB46(3)
==================================================
bZIP_DOF
<---------
ANAC46
<----------
DOF2
--------->
ANAC58
<---------
DEAR3(1)
<---------
HSFC1(2)
<-------
TEIL
<------
NtERF2
--------->
HSFC1(2)
--------->
CCA1(2)
------>
NtERF2
<--
--------->
MYB46(3)
--------->
HSFB2a(1)
--------->
ARR14(1)
------------>
AtMYB77
>
ANAC58
<---------
WOX13(1)
<---------
ARR14(2)
<---------
DEAR3(1)
<
>
ANAC58
--------->
ATHB12
<---------
GLK1(2)
<---------
RAP2.6(2)
>
ANAC46
--------->
ICU4
--------->
ARR14(2)
=============================
MYC_MYB
>
ANAC55(2)
<---------
YAB1
<------
ZmHOX2a(1)
--------->
ARR11(1)
<---------
RAP2.3(2)
>
ANAC55(1)
--------->
YAB1
--------->
LBD16
--------->
ARR14(2)
<---------
LBD16
-----
>
bZIP60(2)
<---------
ATHB12
<---------
LBD16
----------->
ARR10
--------->
At5g28300
--------
>
O2
--------->
ARR14(2)
<---------
HSFB2a(1)
<---------
ARR14(2)
============================
MYC_MYB
gagttggaacctccaacgatgattggaagctttccacggtttaggacggattcaatggagagattcgccatgtgacagtaattcgcggcggttaagtcgg
23330100
<-----------
ARR10
--------->
ZAT2
<---------
ZAT2
--------->
At4g35610
<---------
ALFIN1
<------
NtERF2
--------->
LBD16
------>
NtERF2
<---------
LBD16
<---------
DEAR3(1)
--------->
SPL7
--------->
ATERF1(2)
--------->
ARR14(2)
<-------
GAMYB
<---------
ATERF1(2)
<---------
ARR14(2)
--------->
MYB52(2)
--
NtERF2
--------------->
AtSPL3
<------
MYB83
----
DEAR3(2)
--------->
ALFIN1
<---------
At4g35610
<------
MYB46(1)
<------
---
DEAR3(1)
<---------------
AtSPL3
<--------
P
<---------
ZAT18
---
RAP2.6(2)
<------
NtERF2
--------->
ZAT18
------>
ZmHOX2a(2)
<---------
ARR11(3)
<---
---------
HVH21
------>
NtERF2
<---------
SPL7
------>
ZmHOX2a(1)
<---------
MYB46(3)
--------->
ZAT18
-----------
RAV1(2)
<------
ZmHOX2a(1)
--------->
ANAC46
<---------
ARR11(3)
--------->
ARR11(3)
<---
---->
At4g35610
--------->
DEAR3(1)
--------->
ANAC46
--------->
ARR11(3)
<---------
HSFB2a(2)
------
->
RAP2.6(3)
------>
NtERF2
<---------
ZAT18
==================
HOX2a_HOX2a
--------->
HSFB2a(2)
------
cttcaggcggcaagacgccgaggagatggtgcggtaccccgcagctctcctcgctcgtgatcttgttggttacaatgtctagaccttggtggacttgtat
23330200
--------->
ANAC58
<---------
ANAC58
<---------
ANAC58
--------->
ICU4
<---------
O2
<--------
P
<---------
ICU4
--------->
ALFIN1
<---------
ANAC58
<---------
MYB52(1)
------->
MYC3
----------->
GT1
<---------
LBD16
--------->
LBD16
--------->
O2
<-----------
HVH21
--------->
YAB1
--------->
ANAC58
<---------
ANAC58
--------->
LBD16
---
CCA1(2)
--------->
ANAC58
--------->
ANAC46
----------------->
AGL1
--------->
AtMYB61
------
ANAC58
------>
ZmHOX2a(2)
--------->
ARR14(2)
<---------
ANAC58
--------->
At4g35610
-
------
ANAC58
<---------
ARR11(3)
<---------
ARR14(2)
<---------
bZIP60(2)
--------->
ANAC58
<
--->
ARR11(3)
--------->
ARR11(3)
<---------
CCA1(2)
<---------
ANAC58
<---------
At4g35610
<-------
->
TEIL
<---------
YAB1
<-------
MYC3
<---------
LBD16
----------->
RAV1(2)
<---------
ATHB12
----
cttgtctgagtttatgatctcagcccgaaaacgtgtggctatatccacggagagtcgtgacttgcctgtcccggtagcacccatgatgaccacaactttg
23330300
<---------
ANAC58
<---------
ANAC58
<---------
MYB46(3)
<---------
ATHB12
--------->
ARR14(2)
<------
NtERF2
<-----------
ARR10
--------->
ANAC58
<---------
ARR14(2)
<------
ZmHOX2a(1)
<---------
CCA1(2)
<------
NtERF2
--------->
ICU4
----->
ZmHOX2a(1)
------>
MYB83
<---------
DEAR3(1)
<--------
P
----------
DOF2
------>
MYB46(1)
<---------
DREB2C(2)
<---------
ANAC46
---
DOF2
<---------
SPL7
<---------
ARR14(2)
<---------
ANAC46
<---------
ORA47(2)
<---------
MYB46(3)
------>
ID1
<---------
ZAT6
<---------
MYB59
---------->
DOF2
--------->
ANAC58
tcctttggaccgtatgggtttagagttagcatattgggaccaaatctcgctggagggaagtctaaagtcggcgaaggaggcaatggttgtttgcacatag
23330400
<---------
ICU4
--------->
ICU4
<---------
YAB1
<---------
ICU4
--------->
YAB1
<---------
YAB1
--------->
ARR11(3)
--------->
ARR11(3)
<---------
ARR11(3)
<---------
ARR11(3)
<---------
ANAC58
--------->
YAB1
<---------
ANAC58
<---------
YAB1
<---------
ANAC46
--------->
ICU4
<------
MYB83
<---------
ARR11(3)
<------
MYB46(1)
--------->
ARR11(3)
<--------
P
--------->
ARR14(2)
--------->
GLK1(1)
<------
MYB46(1)
<---------
GLK1(1)
<------
MYB83
<---------
ARR14(2)
--------->
RVE1(1)
--------->
MYB111(1)
<---------
RVE1(1)
--------->
MYB59
--------->
CCA1(1)
<---------
ANAC46
--------->
MYB111(2)
<---------
CCA1(1)
<---------
ANAC46
--------->
MYB46(2)
<---------
ARR11(3)
<----------
DOF2
<---------
ANAC58
<---------
MYB46(3)
--------->
ARR11(3)
<---------
YAB1
<---------
ANAC58
<---------
YAB1
<---------
CCA1(2)
ccatagatatcttcatgatcat
gatgaaacgctttgcaatataaacttgctggtgtttaaaatatgttttgttatgtttggtaggcttgtatatcttctt
23330500
<-----------
TBP
--------->
AHL20(2)
<---------
AHL20(2)
<-----------
TBP
--------->
ARR14(2)
<---------
ARR14(2)
--------->
ANAC58
<---------
TOE2(3)
--------->
ANAC46
<---------
AtLEC2
--------->
AHL20(2)
--------->
CCA1(2)
----------->
HVH21
<---------
AHL20(2)
--------->
YAB1
*
TSS
<----------
DOF2
<-----------
TBP
--------->
ZAT14
<---------
At4g35610
<---------
YAB1
<---------
ZAT14
--------->
At4g35610
--------->
CCA1(2)
<---------
ALFIN1
<---------
SPL7
--------->
ANAC58
<-----------
RAV1(2)
<------
ZmHOX2a(1)
<-----------
HVH21
>>>>>>>>>>>>>>>>>
LFY
<----------
ID1
atatatgaaatgttc
aggtgactttgcatgaaggatatgatttatatatatagggtcacacacttagtaaatggccactgtacgaatgatatacgacaag
23330600
<---
<---------
AHL20(2)
----
--------->
AHL20(1)
<-----
<---------
AHL20(2)
------
--------->
AHL20(2)
<-----
<----------
DOF2
<---------
WRKY38(1)
------
<---------
DAG2
--------->
WRKY18(1)
------
<---------
DAG2
<-----------
HVH21
<-----
--------->
ANAC58
<---------
WOX13(1)
<----------
DOF2
<------
--------->
ANAC58
--------->
ATHB12
<---------
DAG2
--------
<---------
ANAC58
<---------
AHL20(1)
<-----------
GT1
------>
ZmHOX2a(2)
<---------
ANAC58
--------->
AHL20(2)
<---------
AHL20(2)
------>
ZmHOX2a(1)
<---------
LBD16
ttggctcgccccttttttaattaattggtcaaacctgttgttttattttactttattctcctctaattctatttagactggccaaatatttgatccgcgt
23330700
--------->
At4g35610
<---------
At4g35610
--------->
AtLEC2
------
ZAT14
<---------
AHL20(2)
-
----->
ZAT18
<---------
ANAC55(1)
<-------
TEIL
--------->
HSFC1(1)
--
PIF5
<---------
ANAC58
--------->
ARR14(1)
-----
->
PIF5
<---------
ANAC55(2)
--------->
CCA1(2)
<----
--
MYC2
--------->
TOE2(3)
--------->
ARR14(2)
<-----
->
MYC3
<---------
ICU4
--------->
ANAC58
<---------
ARR14(2)
-------
->
MYC2
--------->
YAB1
--------->
ANAC58
--------->
ARR11(1)
<------
ZmHOX2a(1)
--
MYC3
<---------
AHL20(1)
--------->
YAB1
<---------
ANAC46
<---------
YAB1
<---------
HSFC1(1)
---
ANAC46
--------->
ARR11(3)
<<<<<<<<<
ARR2
<---------
YAB1
<---------
TOE2(3)
--------->
HSFB2a(2)
->
LBD16
--------->
AHL20(1)
<---------
ATHB12
<---------
ANAC58
----------->
ARR10
<---------
HSFB2a(2)
gcaatgcagatgatatatattgataatgtcacaatcaaacgtaaacttctattacgtttgatgtgaagttaagatacgattttttttctaggaaaataac
23330800
--------->
AHL20(1)
<---------
AHL20(1)
--------->
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(2)
--------->
AHL20(2)
-------->
AHL20(2)
--------->
YAB1
---->
ICU4
--------->
YAB1
-----
YAB1
<---------
AHL20(2)
----
TOE2(3)
--------->
AHL20(2)
<
-->
MYB52(1)
<----------
DOF2
<---------
AHL20(2)
<---------
At4g35610
gattatatgcgaggcagaaagttttaagaagcatttctcttctttttaataaaaatatatatgggttatttttttttgatgggttattgtctaagctcat
23330900
<---------
ZAT14
<-----------
GT1
----------->
GT1
--------->
AHL20(2)
--------->
YAB1
--------->
YAB1
--------->
AHL20(2)
--------->
ARR11(3)
<---------
ZAT18
--------->
WOX13(1)
--------->
ICU4
<---------
ARR11(3)
--------->
ZAT14
<------
NtERF2
<---------
WOX13(1)
<---------
AHL20(2)
<---------
YAB1
<---------
ATHB12
<---------
AtLEC2
<---------
AHL20(2)
---------
AHL20(1)
<---------
AHL20(2)
--------->
RAP2.6(2)
--------------------->
WRI1
agtatatttgtttttaatagattttatcatgttattagagcagtcgcaatgaaaaactcggcaattaccttggatggattgacattatttaactaaaaac
23331000
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AGI:
At3g63110.1
Description:
ATIPT3 (Arabidopsis thaliana isopentenyltransferase 3); transferase, transferring alkyl or aryl (other than methyl) groups. similar to ATIPT5 (Arabidopsis thaliana isopentenyltransferase 5), transferase, transferring alkyl or aryl (other than methyl) groups [Arabidopsis thaliana] (TAIR:AT5G19040.1); similar to isopentenyltransferase [Brassica rapa subsp. pekinensis] (GB:BAE43827.1); contains InterPro domain tRNA isopentenyltransferase; (InterPro:IPR002627); contains InterPro domain Isopentenyl transferase-like; (InterPro:IPR011593)
Range:
from: 23329051
to: 23330515
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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