Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                   ====                                                                                                 ====                                                                                                 ----                                                                                                <----                                                                                                =====                                                                                                =====                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                               <-----                                                                <---------ZAT14                ------                                                                --------->ZAT14                <-----                                                                --------->REM1(2)       <----------DOF2                                                          --------->GLK1(2)            <---------ICU4                                                        --------->At4g35610            ------>ZmHOX2a(2)                                                        <---------At4g35610            ==============                                         <---------ARR14(2)    --------->ALFIN1      <---------ARR11(3)                          --------->ANAC55(2)   <---------MYB52(1)                   --------->ARR11(3)                          <---------ANAC55(2)---------->ID1    <---------ANAC46 <---------ARR14(2)                        <-----------GT1  --------->ARR14(2)  <---------ANAC46   --------->ARR14(2)  -            <---------At4g35610      <-------TEIL  <---------ANAC46          <---------ANAC46 <------   gttagaacggtttcagcgactaaatgttacatattcacatacagttcttcgttttgtgagatgctgtgtagacttgtttgagtatatgatctttacagat  23326100       ============================HOX2a_HOX2a       <------ZmHOX2a(1) =============HOX2a_HOX2a ================================HOX2a_HOX2a -->ZmHOX2a(2) --ZmHOX2a(2) =============HOX2a_HOX2a ================================HOX2a_HOX2a --->AGP1 --->ARR11(3) ----AGP1 ----ARR11(3)                    <---------WRKY38(1) --->ARR14(2)                   <---------ATHB12        <---------ARR11(3)                       <--- ----ARR14(2)                   --------->MYB46(3)   <----------DOF2                 --------->WOX13(1) =============HOX2a_HOX2a     --------->WOX13(1)  <---------ARR11(3)               ------------>CBF --------->DOF2             <------ZmHOX2a(2)     --------->ARR11(3)         <----------DOF2     ---- ---CCA1(2)--------->YAB1 <------ZmHOX2a(1)      <---------CCA1(2)         <XXXXXXXXXXXXXXXXXXXXMIR3440B-3P   cttaaagcaggaatcatcttgtagattaggatcaatcaacgcttaacgcttaaatctttatcttcttctcatgtgttttcttttgatcaatccaagtttt  23326200                                                                  <---------MYB46(3)                                                                <---------ANAC58                                                                <---------ANAC58                 --------->ANAC55(2)                           <---------MYB46(3)             <-----------HVH21                 <---------ZAT6<---------WOX13(1)         <----------DOF2                <------------CBF    <------------CBF <-----------GT1 --------->ANAC58     --------->AHL20(2)  <---------AHL20(2) ------AHL20(2)  <---------ANAC55(2)  <---------AHL20(2)  --------->AHL20(2)                     ---- ----->AHL20(2)  --------->ANAC58<---------At4g35610     --------->AHL20(2)              ---------->ID1   aaattacatttctttggtcacgcatttggagttgcagctattaattgtagttttagtcatttaattggttgtggaatttggaacaagacttgttgttata  23326300                                                      --------->ANAC46                                                      <---------ANAC55(2)                                                      --------->ANAC58                                           --------->ZAT6                          --------->TOE2(3)                                         ------>MYB83 --------->ANAC58            <---------ANAC55(2)                                         ------>MYB46(1)                      <---------ARR11(3)   --                                       <---------MYB111(1)              --------->ANAC58           <-                      ---------->DOF2  <---------MYB46(2)               --------->ANAC46        <----                  ---------->DOF2      <---------MYB59--------->AtLEC2  --------->ANAC58        -----                ------>ZmHOX2a(1)  --------->MYB46(3) --------->ANAC55(2)------------>CBF       ----- -------->CBF ----------->RAV1(2)--------->ANAC46 <-----------HVH21   --------->MYB52(1)    ------>ZmHOX2a(1)   ccaatgtgaaacactctcctgaaagaaagctctacaaacaacctaacaccaaggtcacgcaaatgaaatggataacgcaatatcacctaaaatccttctg  23326400                                                          --------->ZAT14                                                    <---------ARR11(3)                                                    --------->ARR11(3)                                                   --------->GLK1(1)                                                   <---------RVE1(1)                                                   <---------GLK1(1)                                                   --------->CCA1(1)                                            --------->ANAC58       <---------ALFIN1       <---------AHL20(2)                                            --------->ANAC46     --------->ANAC58         <---------YAB1                                 ---------->DOF2   <---------CCA1(1)                   <----------DOF2     <----------DOF2            <---------AHL20(2) --------->RVE1(1)                   <---------DAG2 ---->NtERF2                  ----------->TBP--------->TOE1(2)   <---------ALFIN1  <-------TEIL --------At4g35610           --------->AHL20(1)   --------->ARR11(3)              --------->CCA1(2) -----At4g35610              <---------ARR11(3)   <---------ARR11(3)             --------->ARR14(2) ---->At4g35610       <----------DOF2       --------->ANAC58     --------->ANAC58<---------ARR14(2) ---->ZAT14      ------>ZmHOX2a(1)        <---------ALFIN1<---------REM1(2) <---------AtLEC2      ---   cagccctctttgtgccttcctcgactttgaatatataaagagacacacctaagatatctcttcacacacacactctctccatggatacactttttattgc  23326500                                                                   --------->ZAT18                                                                 ------->PIF5                                                                 <-------PIF5                                                                --------->ANAC58                                                                --------->ANAC58                                                              <---------ALFIN1                                                           --------->AtMYB61           --------->ANAC58                                                           <---------ALFIN1<---------ANAC58    <-----                                                           --------->DEAR3(1)          --------->ANAC46  --------->ZAT6        <----------DOF2             <---------GLK1(2)      <---------ANAC58   ------- ------>At5g28300     ------>ZmHOX2a(1)   ----------->GT1 --------->MYB46(3)           --------->ANAC58   agtaactctggctctcgctctctcctctttcacaagaggccagagagtgatacagattccaccaccacgtccactatgcgcgtctcaatacgccctagct  23326600                                              <------NtERF2            --------->ANAC58                --------->RAP2.3(3)            --------->ANAC58              ------>MYB83                                    <---------ICU4            --------->O2                  ------>MYB46(1)                             --------->LBD16            <---------O2                ------->PIF5                                  ------>ZmHOX2a(1)            --------->ANAC46            <-------PIF5                                ----------->RAV1(2)            <---------ANAC55(2)         <---------MYB55(2)                         ------>NtERF2            --------->ANAC55(2)         <---------MYB111(1)    --------->ZAT2   <---------ATERF1(1)       <---------ZAT2                  ----------->RAV1(2)     --------->At4g35610--------->DEAR3(1)       --------->ZAT2                --------->AtMYB61         <---------ZAT2   ------>NtERF2       <---------At4g35610           <---------ALFIN1          <---------At4g35610<---------ALFIN1       --------->At4g35610           --------->DEAR3(1)       ------>ZmHOX2a(1)--------->DEAR3(1)    ----------->RAV1(2)             --------->MYB46(3)   <---------ZAT2        --------->ANAC46   ------>NtERF2                  <---------ALFIN1      ------>NtERF2          --------->ANAC58  --------->ANAC58       --------->ZAT18--------->MYB46(3)  ----------->RAV1(2)<---------ALFIN1  --------->ANAC46     <---------ZAT18 --------->At4g35610--------->AtMYB61    --------->ANAC58  --------->ANAC58     --------->ZAT14 --------->ZAT2  <---------ALFIN1       <---------LBD16      <- ----MYB59  --------->TGA1a    --------->PCF2------>NtERF2<---------ALFIN1   <---------ATERF1(1)----- -->STY1(2) <---------TGA1a   <-----------HVH21     --------->ANAC46        <---------ALFIN1   ------   aactacgcctgctcacgtctcccaatgcacactgtcccaccacctgcccccattaccccacctcctgctcccatcgctcccccgcctcctgaacatgacc  23326700                                                           --------->YAB1                                                          <---------YAB1                                                          --------->ICU4       --------->ANAC58        --------->ANAC58        --------->ICU4       --------->ANAC58        --------->ANAC58        <---------YAB1 --------->ANAC58           <xxxxxxxxxxxxxxxxsmallRNA(s)--------->YAB1 --------->ANAC58        --------->ANAC58           --------->ICU4           <---------ICU4 --------ALFIN1          --------->ANAC58  --------->WRKY38(1)               --------->YAB1      ---- ---->AtMYB61       <---------WRKY18(1)    --------->WRKY12<---------ICU4   --------->ICU4       ---- --->MYB46(3) <---------WRKY18(1)    --------->ANAC46--------->YAB1 <---------WRKY18(1) <------ZmHOX2a(2)   accacgaccacgaccatgaccatgaccacgaccacgaccacgacgatgaccacgatgatgatgatgaccatgaccacgatgatgaccacgatcacgacca  23326800                                                             <---------WRKY18(1)                                     <---------WRKY18(1)------>NtERF2       --------->YAB1                              ----------->HVH21  <---------WRKY18(1)        <---------ICU4                         <---------WRKY18(1)    ----------->HVH21  <---------WRKY18(1)     --------->ARR11(3) --------->WRKY12       <-----------HVH21  ----------->HVH21    --------->YAB1      --------->WRKY38(1)<---------WRKY18(1)   <-----------HVH21   --------->ZAT2   <---------YAB1       ----------->HVH21 ----------->HVH21 ----------->HVH21  <---------WRKY18(1)  < ------->HVH21 ----------->TGA1<---------WRKY18(1)     ------>NtERF2       --------->ICU4    -------- ------->TGA1  ----------->HVH21    ----------->HVH21 ----------->HVH21    <------ZmHOX2a(2) --------   tgacgatgatcacgaccatgacgacgatgaccgtgaccgtgaccgtgaccgtgaccgcgaccgtgaccgtgaccgcgatcatgaccgtgctcacgatgac  23326900                                                                  --------->AtMYB61                                                               <---------ATERF1(1)                                                               --------->ORA47(1)                                                               ------>NtERF2                                                              <---------ETT(1)                                                             <------NtERF2    --------->YAB1                                                             --------->ATERF1(1)                                                             --------->RAP2.3(1)                                                             --------->ORA47(2)                                                      <---------ICU4         ----------->TGA1                                                      --------->YAB1 <---------ALFIN1                                                   <---------ICU4--------->MYB46(3)    ------->GAMYB                              <---------ICU4       --------->YAB1<---------MYB55(2) ----------->RAV1(1)                           --------->YAB1 --------->YAB1     --------->DEAR3(2) <---------bZIP60(1)                        --------->YAB1    <---------ICU4    <---------RAP2.3(1) --------->bZIP60(1)                  --------->YAB1         <---------ATHB12   <---------ATERF1(1) <----------ID1         <---------ICU4 <---------ICU4 --------->WOX13(1)   ------>NtERF2  --------->YAB1 ---------WRKY18(1)    --------->ICU4 --------->MYB46(3)----------->TGA1----------->RAV1(1)    <----- ->WRKY12--------->YAB1<---------ATHB12--------->YAB1--------->ICU4  --------->AtMYB61--------->MYB46(3) ->WRKY38(1)<---------WRKY18(1)  --------->YAB1 --------->YAB1--------->DEAR3(1)<---------ETT(2)   <-   catgaccataaccatgaccatgacaatgatcacaatgacaacaatcacgaccataatcatgacgccgaccaccacaacaatgacgacaacagccacgatc  23327000  Previous    Next  AGI:  At3g63095.1    Description:  similar to hypothetical protein [Vitis vinifera] (GB:CAN64249.1); contains domain SSF48452 (SSF48452) Range:  from: 23326481    to: 23327233    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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