Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                              <-------TEIL                                          <-------MYC3         <---------HSFC1(2)               ------->MYC2         --------->HSFC1(2)               ------->MYC3         <------MYB83                     <-------MYC2         <------MYB46(1)                  ------->PIF5                                             <-         <---------HSFB2a(1)             <---------ANAC46                                 --------->ARR11(3)      <------ZmHOX2a(1)                 ------>NtERF2                                    --------->HSFB2a(1)   <---------LBD16                      --------->LBD16                                  <------MYB46(1)   <-----------RAV1(2)       <---------ANAC46                               --------->At4g35610    -- -------->HVH21              <---------ANAC58                              --------->ANAC46   ------>ZmHOX2a(1) --------HVH21<---------HSFB2a(2)     <---------LBD16                    ---------->DOF2 <------MYB83 ----->At5g28300          --------->ALFIN1<-------PIF5                <---------YAB1     <---------HSFC1(2) ---At5g28300 --------->HSFB2a(2)<---------GLK1(2)                  --------->ZAT6       --------->HSFC1(2) --ALFIN1--------->HSFB2a(1) <---------ANAC58     <-----------GT1  <---------YAB1        <---------HSFB2a(1)   gtgactcaggaaggttgcagaacaataggtggagtgattctccgcgtgcatataacaatagacactcttatcactataagcagcattcggaaggtcctgt  23320300                                                   --------->YAB1                                                 ------->TEIL                                              <---------YAB1                                           --------->TGA2(2)                                          <-----------TGA1                                          <-----------HVH21                                         ============================bZIP_DOF                                         --------->bZIP60(2)                       <---------TOE1(2)                                         --------->TGA1a                           <---------TOE2(2)                                         --------->ANAC46      ===================================MADS_MADS                                         --------->O2          --------------->AGL15             ----------->GT1             <---------O2          <---------------AGL15     <------ZmHOX2a(1)                   --------->ANAC58     <-----------------AGL1             ---- --------HSFB2a(2)         <-------TEIL  --------->ANAC58 <----------DOF2         ------>ZmHOX2a(1) ------->HSFB2a(2)   ----------->GT1   <---------ALFIN1  <---------DAG2           --------------->AGL15   tccagtaggaatgagaggtaatatggaaattcatacttgttccacgtcatgaatcagagccttttcttatactggaattgtttcctaggtttagaaactc  23320400                                                           <---------ANAC58                                 <------MYB83              <---------ANAC46--------->ARR11(3)                                 <------MYB46(1)           <---------AtLEC2<---------ARR14(2)                                --------->MYB59            <---------ANAC58<---------ARR11(3)                            --------->ATHB12 <-------TEIL<---------YAB1   <---------CCA1(2)       <----------DOF2     <---------YAB1   --------->CCA1(2)        <---------MYB46(3)       ------- ------->HVH21        <---------AHL20(2)    --------->GLK1(2)     ------>ZmHOX2a(1)    <---------AHL20(2)   tgacattttcttttgactggggattttatatcattaggtctctgagattcgagattgttttgcttgtcctgtgggtatatcttgaatataaaaatgaact  23320500                              <---------ANAC58                              <---------ANAC58                              --------->TGA1a                              ====================bZIP_DOF                              <---------bZIP60(2)                              --------->O2                              <---------O2                              <---------ANAC46                              <---------TGA1a                           ----------->HVH21                         --------->LBD16                        --------->TOE1(2)                        <---------LBD16                      <------ZmHOX2a(2)                      --------->CCA1(2)                     <---------ARR14(2)                                               --------->At4g35610                     --------->ARR11(3)                                               <---------At4g35610                     --------->AGP1                                                 <---------ZAT18                     --------->ARR14(2)                                        <---------ZAT18                    <---------At4g35610                                        --------->ZAT18              --------->GLK1(1)                                                <---------ZAT14              <---------GLK1(1)                     <----------ARF1            --------->ZAT14              --------->CCA1(2)    <---------bZIP60(1)                         <-------TEIL             <---------ARR14(2)<-------PIF5     --------->ALFIN1           --------->DAG2           -    <---------YAB1  --------->At4g35610---------->DOF2      --------->CCA1(2) --------->ALFIN1      < >TEIL       --------->ARR14(2)------->PIF5   --------->ALFIN1           ---------->DOF2        -----   tggagtatgtttgtggatatgcagatccagggacgtggcatcaaaggtgagtgggagacaagagatgaagaagggcaaaggtgcagtctgctctaaatga  23320600                                                             ----------->RAV1(2)                                                        ========================bZIP_DOF                                                        ---------->DOF2          ----------->GT1                                                      <------MYB46(1) ===============================                                                      <------MYB83    ===============================                                                    ============================MYC_MYB                                                    <--------P        ===============================                                                  <------MYB46(1)     --------->O2                                                  <---------MYB46(3)  <---------O2                                                 <---------AtMYB61    --------->TGA1a                                                <--------P  --------->ARR11(3)  --------->ARR11(3)                                                ================================MYC_MYB -------->ARR11(3)    ---------->DOF2         <---------REM1(1)       <---------TGA1a          ------ ---------ARR11(3)--------->AtLEC2            --------->ALFIN1      <---------ALFIN1         -------- ----->DOF2  --------->YAB1        ----------->GT1<------MYB83   <---------PCF5 <---------ARR11(3)  -   aagacatttgggctatagtcatggaaaagaagaaatagggagaaacaagtgtaggttggaaagacctgggccacttgagagagatgttaatatacaaaag  23320700              <---------ANAC58              <---------ANAC58              <---------ANAC46            <------MYB46(1)     ------------>AtMYB77  --------->DAG2   <---------ZAT14                                           <-----------RAV1(1) =================MYC_MYB                                                    <---------MYB46(3) ===bZIP_DOF<------MYB83                                              --------->ANAC58 ===bZIP_DOF*TSS<---------ANAC46                                      --------->ANAC58 ----->GT1 <---------AtMYB61                                   <---------ANAC46 -->DOF2   <---------MYB46(3)                       ---------->DOF2 ---------->DOF2 --------->DOF2 --------->ALFIN1       <---------ANAC46        ----------->GT1  <---------REM1(1)  --   aaaaaaggcacagttggtgtgtgtacatatgaccaaaaacgtcgtggagaaggctaaagaaacagtcgtgaaaagccatttgttgtagtagagagagaga  23320800                     <-----------------AGL1                                   <---------MYB46(3)        --------->ANAC58                                               <---------LBD16    --------->ANAC46        --------->ANAC58                                          <---------YAB1 ----------->GT1       --------->MYB46(2)                              <---------AHL20(2)    <---------AtMYB61       --------->MYB59                                 --------->AHL20(2)    --------->ALFIN1 ------->CCA1(2) <-----------HVH21                     --------->AHL20(1)  --------->ALFIN1   gatttgagttaggcaatactgtcactgatttaggcatttgatattttgtaaacaaaattttttggtttatttttggggagtggtggtaatacacactaat  23320900            <---------LBD16           --------->At4g35610           ----------->RAV1(2)           <---------At4g35610           <---------ZAT2                              <---------AHL20(2)           <---------O2                                --------->AHL20(2)        ----------->HVH21                   ---------->DOF2       <-----------HVH21                   <---------WRKY38(1)   <---------ARR14(2)                      <---------WRKY45    --------->AHL20(2)  <---------GLK1(1)     --------->At4g35610<---------WRKY12 ----------->GT1----------->GT1         -- ------->TEIL      --------->CCA1(2)      --------->WRKY18(1)  <---------AHL20(2)        <---------TOE2(3)   atgcatttctgtcacctggagagatgagatgtctctaaaaaatggtcaaagaggcgattaattagttaaatagcaaatggaaaaaacaattagggatggg  23321000                                                                                              <------                                                                                              -------                                      --------->ZAT2                                          <------                             <----------DOF2                                                 --------                    --------->YAB1    --------->At4g35610                                    <-------                   <---------YAB1     <---------At4g35610                                   ---------                   <---------TOE2(3)  <---------ZAT2                                     --------->AHL20(2)           --------->ANAC58<---------At4g35610                                          <---------ATHB51           --------->ANAC58--------->At4g35610                         <---------GLK1(1)--------->AHL20(2)   --------->MYB52(2)      --------->ZAT2                              --------->GLK1(1)<---------AHL20(2)   <---------MYB46(3)  --------->MYB52(1)       --------->AHL20(2)--------->At4g35610   <---------ATHB12 ------->MYB52(2) <-----------GT1 <-----------RAV1(1)      <---------ATHB12   --------->WRKY38(1)   tttgtttgttaccaaggaattaacataacagctgtaatgctgctgcgagataaaatgaacaatgaagaagcggagacctgttgacttcaaataattttaa  23321100                                                          <-----------HVH21                                                         <-----------RAV1(1)                                                         ----------->HVH21                                                --------->YAB1        --------->WOX13(1)                                               <---------YAB1       <---------ATHB12      <---------TOE2(3)                                             <---------ICU4       --------->GLK1(1)       <---------TOE1(3) ---AHL20(2)                                 --------->YAB1 --------->ETT(1)           --------->WRKY18(1) -->AHL20(2)                       <---------ANAC58  ================RAV              <-----------HVH21 ---YAB1                           <---------ANAC58  --------->At4g35610             --------->DEAR3(1) ->AHL20(2)                       <---------MYB46(3) ----------->RAV1(2)  --------->WOX13(1)      <-- --AHL20(2)                    --------->CCA1(2)<---------ICU4<------NtERF2        <---------At5g28300 >YAB1               <------ZmHOX2a(2)    --------->REM1(1) <---------ANAC46      <-----------GT1 ---   ttagtttcttctgtgcgatagagatcgatcgagagatgggtgcttcatcatcatcatctgtgtcggagaaatcaatccatcaattcaccgtcaaggtttt  23321200  Previous    Next  AGI:  At3g63070.1    Description:  PWWP domain-containing protein. similar to PWWP domain-containing protein [Arabidopsis thaliana] (TAIR:AT2G48160.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22498.1); contains InterPro domain PWWP (InterPro:IPR000313); contains InterPro domain Regulation of nuclear pre-mRNA protein (InterPro:IPR006569) Range:  from: 23313340    to: 23320633    Orientation: Forward Links:  TAIR  MIPS    AGI:  At3g63080.1    Description:  ATGPX5 (GLUTATHIONE PEROXIDASE 5); glutathione peroxidase. Identical to Probable glutathione peroxidase 5 (GPX5) [Arabidopsis Thaliana] (GB:Q9LYB4); similar to ATGPX4 (GLUTATHIONE PEROXIDASE 4), glutathione peroxidase [Arabidopsis thaliana] (TAIR:AT2G48150.1); similar to unknown [Populus trichocarpa] (GB:ABK95195.1); contains InterPro domain Glutathione peroxidase; (InterPro:IPR000889); contains InterPro domain Src homology-3 (InterPro:IPR001452); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Thioredoxin fold (InterPro:IPR012335) Range:  from: 23320712    to: 23322361    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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