Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100   ------DOF2                                                                <---------ZAT14 -----DAG2                  <---------MYB59                      ----------->GT1 ----GT1                ----------->HVH21                      <---------MYB52(1) --------->ICU4 >AHL20(2)             <---------KAN4(2)   <-----------GT1 ------>NtERF2   --------->ZAT14   ttatagttttttaaaactgatggggaatgacccaattcaatgttttcaccctctcaattgcagccattagttaatactgtagtaatgtttagaaactagt  23305000                                                              --------->GLK1(1)                                                             <---------ARR14(2)                                                             --------->ARR14(2)      <---------YAB1                                                          <---------ANAC58     --------->AHL20(2)                                        --------->ATHB12  --------->ANAC55(2)----------->GT1                            <---------AHL20(1)            <---------ANAC58  <---------TOE1(3) <------                            --------->AHL20(1)            <---------ANAC46  <---------TOE2(3) <------                      --------->ANAC55(2)         --------->At4g35610      ---------->DOF2    -------                   <-------TEIL        <---------ATHB12 <<<<<<<<<<AtWER   --------->AHL20(2)<--------        <---------ANAC46   --------->ICU4        --------->ALFIN1         <---------AHL20(2)<--------   ttcaaaattttcgtagaaaaattcatgtaatatttttaaaaatcattcgatgtgctgcatgcgtatttcccaaaaattaaagttaatatgatttaagatt  23305100                                                          <---------GLK1(2)                                                          --------->ARR11(3)                              --------->At5g28300----------->GT1                           <---------ORA47(1)    <---------At4g35610        <---------ICU4    <------ZmHOX2a(1)      --------->At4g35610     <---------ICU4    --------->DAG2    <---------AHL20(1)   ------------>CBF   ---------->DOF2    <---------AHL20(2)                                   ------- ---ARR11(3)     --------------->AGL15   --------->AHL20(1)                                 ------>NtERF2 ---GLK1(2)     ----------------->AGL3   --------->AHL20(2)                                --------->LBD16 -->ARR11(3)   ----------->RAV1(1)     <---------TOE2(3)  <---------ARR11(3) <---------AHL20(2)     < -TOE1(3)      ------>NtERF2 ----------->GT1 <-----------GT1             ----------->GT1--------->AtLEC2 -TOE2(3)<---------At5g28300<---------DEAR3(1) <-----------RAV1(2) --------->ANAC46<-----------GT1  <   ttgttcacaattactgccaccagaaaaaggacggtgagattaatattttacaggtgaaaagatttttccaagacaaggtttaatttgaccatgcggacca  23305200                                                                                               ------                                                                                               ------                                                                                             <-------                                                                                           ----------                                                                                         --------->MYB46(3)                                                                                         <------NtERF2                                                                                        <---------ATERF1(1)                                                                    <------NtERF2      --------->PCF5                                                     ------>ZmHOX2a(2)                 --------->PCF2                                                   --------->ARR14(2)   <---------ARR14(2) ------>NtERF2                                             <---------ARR14(2)--------->ANAC58        <---------TCP15(1)                                 <---------MYB52(1)<---------ARR11(3)   --------->ARR14(2)<---------ALFIN1 ----->CBF  <-----------HVH21   <-------GAMYB--------->ARR14(2)--------->ANAC58        <---------TCP20 -----------GT1                ----------->GT1   ------>ZmHOX2a(1) ------>NtERF2   <---------At4g35610 ---------AHL20(2)       ---------->DOF2----------->GT1 <---------MYB52(1)         --------->At4g35610   atttacttacaaggtgtcatggtttacaaaagcccgttaaatgagtaaatcctgatctgtttgccacgctggcaaaacctctcgcagaggccccaccaaa  23305300                                                                                                    <                                                                                                    -                                                                                                    <                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                    <                                                                                                    <                                                                                                    <                                                                                                    >                                                                                                   --                                                                                                   <-                                                                                                   --                                                                                                  <--                                                                                                 ----                                                                                               <-----                                                                                            ---------                                                                                         --------->YAB1                                                                                         --------->TOE2(3)        --------->TOE2(3)                                                               <---------YAB1       --------->ATHB12                                                                 ----------->GT1       <---------ICU4                                       <---------ZAT14          <---------MYB52(1)      <---------ATHB12                              ------>ZmHOX2a(2)                --------->ARR14(2)  ----------->TBP                                   ===============================HOX2a_HOX2a ------ >MYB46(1) <---------AHL20(2)                      <------ZmHOX2a(2)                 <---------ARR14(2) >MYB83--------->YAB1                              ================================HOX2a_HOX2a<------ --MYB111(1)                                    <---------ANAC58                   <---------MYB46(3) ->RAV1(1)--------->AHL20(2)                    <---------ANAC58            <------ZmHOX2a(1) -------   tactataaatcattaaatctcgtttaaggcccaaaaaatgatgcagagttgcgatcgtagagagtagagaacagggaaggacgagcggttatgttaatca  23305400  --------->TGA2(2) <-----------TGA1                                                                                 --- ---------TGA2(1)                                                                                <--- -------->bZIP60(1)                                                                              ---- ---------bZIP60(1)                                                                             ----- -------->TGA2(1)                                     <---------WRKY12                         <----- -------->O2                                          <<<<<<<<<WRKY18                        <------- -------->ANAC55(2)                                 <-----------HVH21                        <------- ---------ANAC55(2)                              <-------PIF5                                <------- <<<<<<<<<HY5                                    ------->PIF5                 --------->ANAC58<------NtERF2 ---------O2                                    --------->ANAC58              --------->ANAC58------- >>>>>>>>>HY5                                   --------->ANAC58              --------->ANAC46------- --------->STF1                                 <---------TGA1a         --------->ANAC58     <------- ----------STF1                                 --------->TGA1a         --------->ANAC46     <------- ------->RAP2.6(3)                              --------->ANAC46        --------->ANAC58     <------- -------TGA2(2)                                 --------->O2         <---------ARR14(2)     <-------- ------->TGA1               --------->CCA1(2)   <---------O2         --------->ARR14(2)     <-------- ----ICU4                  <---------ARR11(3)   --------->bZIP60(2)----------->ARR10        --------- >WOX13(1)             --------->LBD16         --------->SPL7    <------ZmHOX2a(1)          <-------- --->YAB1            <---------LBD16        --------->DEAR3(1)<------NtERF2--------->DEAR3(1)------>NtERF2 ---ATHB12    <---------GLK1(2)            --------->ANAC46   <---------At4g35610           <-------- -->ICU4------>ZmHOX2a(1)  --------->ARR11(3) <---------ALFIN1--------->At4g35610        ----------->HVH21   tgacgtcatcctctacgattctcaccggagatatagatgaagaacaccgcacgtcgtcaatggcagaggaagacacgcctacgcattcccatcgacggcg  23305500                        --------->DEAR3(1)                       --------->ATERF1(1)                       <------NtERF2                       --------->RAP2.3(1)                      <---------ATERF1(1)   <---------ALFIN1   <---------DEAR4(2)  <---------ZAT18     ------>NtERF2  --------->ZAT18     <---------ORA47(2)  --------->ZAT14     <---------RAP2.3(1) ------>ALFIN1        <---------ERF1                    ------>ZmHOX2a(2) ---NtERF2           <---------ATERF1(2)               --------->GLK1(1) ----->ATERF1(1)     <---------DEAR3(1)                <------ZmHOX2a(2) ->NtERF2            --------->DEAR3(1)               <---------AGP1 ----DEAR3(1)        <---------RAP2.3(2)              --------->ARR11(3) --ERF1              <---------RAP2.3(3)              <---------ARR14(3)                          --- --RRTF1(1)          --------->ATERF1(2)              <---------ARR14(2)                          --- --ORA47(2)         <---------ABI4(1)                 --------->ARR14(2)                          <-- -->ATERF1(1)       --------->ATERF1(1)               <---------ARR11(3)                         ---- -->ZAT18          <---------RAP2.3(1)               <---------CCA1(2)                     ------>NtERF2 --RAP2.3(1)       ------>NtERF2                  --------->At4g35610                     --------->DEAR3(1) --DEAR4(2)        <---------ATERF1(1)         <---------MYB52(1)                         ----------- --ATERF1(1)       --------->LBD16            --------->LBD16                            --------->SPL7 -RAP2.3(3)       <---------RAP2.3(2)        <---------ANAC58                      <---------ARR14(2) -RRTF1(3)        <---------LBD16            <---------ANAC58                      --------->ARR14(2) >ANAC46 ------>ZmHOX2a(1) ------->TEIL   <---------ARR14(2)      --------->AHL20(2)    ------>NtERF2 -RAP2.3(2)       <---------RAP2.6(2)     --------->ARR14(2)  <---------ZAT6       --------->GLK1(2) -DEAR3(1)       <---------LBD16   ---------->DOF2<---------At4g35610             <---------GLK1(2)   ctggagcactcctgttgattccggcggcgaacctcttcaaagcttatccgtgagcagatctctagagataaaatcagaccacgagaatcccgacgacgag  23305600                                                                                                    <                                                                                                    -                <---------ANAC58                                                              <------ --------->ANAC58           <---------YAB1                                                    ------- --------->ANAC46      ----------->GT1                                                       -------- --------->ANAC58 --------->ALFIN1                                                           <------- ------>ZAT18   <---------ANAC46                                      <---------At5g28300    <------- ------>ZAT14   <---------ANAC58                               ------------>MYB.PH3(1)     ---------- -------ZAT14   --------->ALFIN1                               --------->MYB52(1) --------->HSFB2a(2) ----->ALFIN1 --------->ALFIN1                              --------->YAB1        <---------HSFB2a(2) >HVH21       <---------ANAC46                <---------ANAC46 ------------>AtMYB77  <------ZmHOX2a(1)   tgcagggaacatagaggtgtgtgtggagttattcttgacgaatatttctcgtgttcttcgaaaaataacagttacagtttctatctaggagggaagatat  23305700                                                             <------NtERF2                                                            --------->LBD16                                                           <------NtERF2                                                           <---------ANAC46                                                          <------NtERF2                                                          <---------At4g35610                                                         --------->DEAR3(1)                                                        <---------LBD16                                                        <------NtERF2                                                        --------->ATERF1(1)                                                       ------>NtERF2                                                       <---------ATERF1(1)                                                       <---------RAP2.3(1)                                                      <---------DEAR3(1)                                                      --------->DEAR3(1)                                                     <------NtERF2                                                     --------->ATERF1(1)                                                    <-----------HVH21                                                    <---------ATERF1(1)                                                    ------>NtERF2                                                   --------->O2                                                   <---------O2                                                   <---------DEAR3(1)                                                   --------->DEAR3(1)                                                   --------->RAP2.3(2)                     --------->At4g35610                                                   --------->RAP2.3(3)                     --------->CCA1(2)                                                  --------->RRTF1(1)                       <------ZmHOX2a(2)                                <---------------------WRI1--------->LBD16                 --------->ARR11(3)                           ----------->TGA1       --------->RAP2.6(1)                     <---------ARR14(3)                         <---------At4g35610      --------->ERF1                          --------->AGP1                         --------->At4g35610      <------NtERF2                   ================HOX2a_HOX2a                         --------->ZAT2           --------->DEAR4(2)              =================HOX2a_HOX2a                      --------->At4g35610         --------->RAP2.3(1)             <------ZmHOX2a(1)                      ------>NtERF2               --------->ORA47(2)          <---------ANAC46      <---------PCF5  <---------At4g35610         --------->ATERF1(1)         <---------O2--------->ARR14(3)     <---------PCF2  --------->RAP2.3(2)         ------>NtERF2              --------->REM1(2)  --------->ALFIN1   --------->DEAR3(1)          <---------ATERF1(1)       ----------->HVH21------>ZmHOX2a(2) ---------ANAC46     <---------DEAR3(1)          <---------RAP2.3(1)       ----------->TGA1<---------At4g35610 -------->DEAR3(1)  --------->RAP2.3(1)         <---------DEAR3(1)<------ZmHOX2a(1)       <---------ARR11(3) ---GLK1(1)       --------->DEAR3(1)       ---------->DOF2--------->At4g35610 <---------bZIP60(2)---- -->GLK1(1)      --------->MYB46(3)      <------ZmHOX2a(2)<---------LBD16<---------ANAC58 <---------ARR14(2) ->ARR11(3)      --------->DEAR3(2)      ================================HOX2a_HOX2a    ----------->ARR10 --ARR11(3)     ------->TEIL--------->MYB52(1)  --------->DEAR3(1)=================================HOX2a_HOX2a --ARR14(2) --------->SPL7 ----------->HVH21   <---------ABI4(2)  ================================HOX2a_HOX2a ->ARR10  <---------SPL7 <---------ZAT2 <---------ARR11(3)------>NtERF2  <---------ANAC58 --------->ARR14(2)   cgccgtggggaccgtatggaccgccgctgctgacggagtcgagatcaaaggcgccgtcgccgcggagaggaagaagcgtgacgaggaagcgagatctgcc  23305800                                     --------->GLK1(1)                                    <---------ARR11(3)                                 <------NtERF2                            <---------DEAR3(1)                          --------->MYB52(1)                                        <---------ANAC58                         <---------SPL7                                             <---------ANAC58                         ------->GAMYB                                       <---------WOX13(1)     <         <<<<<<<<<<<<<<<<<LFY<---------SPL7                          <-------GAMYB <------NtERF2  <--        --------->ANAC46<---------MYB52(2)                          <---------MYB46(3)           <---        --------->bZIP60(1)--------->SPL7                           <---------DEAR3(2)         ------        <---------bZIP60(1)--------->RAP2.6(3)                     <---------DEAR3(1)      <---------At4g35610      <-----------GT1   --------->MYB46(3)      <------ZmHOX2a(1)------------>AtMYB77 --------->ALFIN1 -->NtERF2            --------->MYB52(1)     <-----------RAV1(2) <------ZmHOX2a(1)------>NtERF2<-----   accatttttgacgacactggattgtaacggacggccgagatttcatcacaggagagtgagaagcgaaggacggttagagattgccagcgtggcagtagat  23305900  Previous    Next  AGI:  At3g63020.1    Description:  unknown protein Range:  from: 23305400    to: 23306014    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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