Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                             --------->ANAC58                                   ---------->DOF2                            <<<<<<<<<MYB98                          --------->AHL20(2)------------>CBF         <------------CBF ------MYB83          --------->AHL20(2)   --------->ANAC58         --------->ATHB12 ------MYB46(1)      <---------ATHB12--------->ANAC58              <---------YAB1 <------ZmHOX2a(1) ------->MYB59     --------->WOX13(1)--------->ANAC58              <------ZmHOX2a(2)     ----------->GT1 ---->ATHB12     ------------>CBF --------->YAB1            <-----------RAV1(1) --------->MYB59 ----- ----YAB1   <----------DOF2  ------------>CBF    --------->YAB1    ======================HOX2a_HOX2a   tttggtcattcactctttatgcaatcaaataaacaataaaagcaaacccaattttaagaagaatgttggatcattgttttgttaggaatactagttaata  23293300                                                                  <---------AHL20(2)                                                        <---------ICU4                        -------                                                       <---------YAB1                   <------MYB46(1)                                                      --------->ARR11(3) --------->AHL20(1)   -------                                                      <---------ARR11(3) <---------AHL20(1)   =======                                                     --------->YAB1    <---------AHL20(1)    <-------                                                    <---------ATHB12   --------->AHL20(1)  <---------GLK1(1)         <-----------GT1                   --------->ARR14(2)    --------->YAB1         <------MYB83   ----------->GT1               <----------DOF2    <---------YAB1--------->AHL20(2)   --------->MYB59  --------->TOE2(3)        --------->YAB1 ----------->TBP   <---------AHL20(2)     <---------AHL20(2)  --------->TOE1(3)       <---------TOE2(3)<---------ARR14(2)<---------AHL20(2)   --------->AHL20(2) ---->YAB1         <------------CBF     --------->AHL20(2)  --------->AHL20(2)    <---------AHL20(2)   aaaacctgaaaatactattcaaattgctaagataactttcaagtatatatgcctatgatcattttaattttaatatatattagattaatttggttatccg  23293400                                                                                         --------->ATHB12                                                                                      --------->YAB1                                                                                     <---------YAB1                                                                                   --------->YAB1                                                                                   <--------HAHB4                                                         --------->TOE2(3)         <---------ICU4                                                         --------->YAB1           <---------YAB1                                                       ------>MYB46(1)            --------->ICU4                                                       ------>MYB83             =====================                                               --------->ZAT6                   --------------->AGL15 ---------->AG                                <---------TOE2(3)             <----------DOF2  <------- ---------->AGL1                             <-----------GT1             <-----------GT1<---------YAB1 ===============================================================================================MADS_MADS ----------AGL1                            --------->AHL20(2)     <---------TOE2(3)--------->ATHB51   aatgggttaacaaaatataagaccatagagcatgaaataacaaaatttaacattaccaatcttattctaatgttttcactttccattattatgatttact  23293500                                                   <---------ALFIN1                                           <---------AHL20(2)                 ----------->GT1     --------->AHL20(2)                   --------->ANAC46                --------->DAG2   <---------------AGL15    <---------HSFC1(1)               ---------->DOF2   --------------->AGL15    --------->HSFB2a(2)          =======================================MADS_MADS<---------HSFB2a(2)      <---------ANAC58     ----------->GT1    <-----------GT1  <---------AHL20(2)         <---------ARR14(2) =========================MADS_MADS  <---------AHL20(2)   --------->HSFC1(1)       <---------ANAC58 ----GT1  <---------------AGL15 <---------YAB1   <-----------GT1    --------->GLK1(1)               <   atataactagtaactaataaagtaataaaccattactatttatataaaaattcacaccttctagaatgcgaattccacataagttgcatacaatctctct  23293600                          <---------YAB1                          <---------AHL20(2)                          --------->AHL20(2)                         <---------AHL20(1)                         --------->AHL20(2)                         --------->AHL20(1)                        --------->YAB1                     <---------AHL20(2)                    <---------AHL20(2)                    --------->AHL20(2)                 --------->YAB1                --------->ICU4                <---------YAB1               <---------AHL20(1)               --------->AHL20(2)              --------->YAB1             <---------AHL20(2)                     <---------GLK1(1)             <---------YAB1                      --------->ANAC46          <---------AHL20(2)                     --------->ANAC58          <---------AHL20(1)              <---------At4g35610        <---------MYB52(1)          --------->AHL20(2)           ---------->DOF2              --------->TOE2(3) ----------->TBP          --------->AHL20(1)         <---------YAB1 --------->GLK1(1)--------->DOF5.7(2)   <-------TEIL ----------DOF2<---------AHL20(2)<----------DOF2 --------->ANAC58   --------->TOE1(3)------->TEIL ---   gtctttttggattatattataattaaatataatttctttattaaagctcccaagaaatctgatttagcaacgttatctcttctcatgtatatatacatgt  23293700                                                     <------ZmHOX2a(1)                                                   --------->LBD16                                                  <---------HSFB2a(2)                                                  <---------LBD16              <---------ICU4                        <---------ANAC58          --------->HSFB2a(2)         ------->TEIL                        <---------ANAC58        *TSS--------->ANAC46     --------->YAB1               <---------ANAC58            --------->YAB1                <---------ICU4               <---------ANAC58           <---------YAB1                <---------ATHB51         <---------AHL20(2)              <-----------GT1                --------->ICU4        --------->AHL20(2)   <------------------------ANAC81            <---------ATHB12          <-- ------->DOF2  <---------ANAC46         <-----------GT1           --------->TOE2(3)  ---------->DOF2   aaaagagagatttatttgcgttttgtgcttgtgtttttttttttatcattttccaggaaacaaaaaaacatcaaataatgaacatgacaaagaacaacgt  23293800                                           --------->LBD16                                       --------->GLK1(2)                                      --------->ARR14(2)                                      <---------GLK1(2)                                      <---------ARR14(2)                                     <---------At4g35610      <-------MYC3                                  <---------At4g35610         ------->MYC3                                  --------->At4g35610         ------->MYC2                               --------->At4g35610            <-------MYC2                               <---------At4g35610           <---------ANAC46      ----------->HVH21                              --------->GLK1(2)             <-----------------------TaNAC69(2)  <----                            <---------HSFC1(2)            <------ZmHOX2a(1)      <---------ANAC46----                            --------->HSFB2a(1)      <-----------HVH21        --------->ICU4 -------- -----GAMYB                 --------->HSFC1(2)     --------->MYB46(3)   <---------DEAR3(1)   --------   cgttgaagtgtcaacatttttgttcttcgaagcatctgcagattccgagacgacccatcaggaacgtggacacgatggcgatgatgtgaaaggttgtgac  23293900                                                                                                    <                                                                                                    <                                                                                                    -                                                                                                   <-                                                                                                   --                                                                                                  ---                                                                                                  <--                                                                                                 ----                                                                                                <----                                                                                               <-----                                                                                               ------                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                               <---------At4g35610             ------                                                              --------->MYB52(1)               <-----                           --------->ALFIN1                  <---------WRKY45                  ------                          ------->PIF5                       <---------WRKY12                  <-----                          <-------PIF5                       <---------WRKY38(1)               ------    --------->At5g28300  <---------At4g35610               <-----------HVH21                  -------   --------->LBD16       --------->At4g35610              <------MYB46(1)                    <-------  <---------ANAC46       <---------ZAT2           <------ZmHOX2a(1)<---------ARR14(2)       --------- <---------LBD16         --------->ZAT2        <---------At4g35610 --------->ARR14(2)     <---------At4g35610 -----YAB1             <-----------RAV1(2)   <-----------RAV1(2)   <---------GLK1(2)      --------->ZAT2 ----->ATHB12        --------->AtLEC2<---------WRKY12     <------MYB83        <-------GAMYB --------- --->HVH21  --------->At4g35610    <-----------HVH21     --------->MYB59      ======================= --->TGA1 --------->ARR11(3)<-------TEIL   <-----------HVH21--------->WRKY18(1)           --------->At4g35610   gattgcggtgaagatgctgagtcatgcaggtgcgagatgtcaacgagtcagaggatgagtaggtcaacggattttgacacggttgaagaagtagctgacg  23294000   <------NtERF2  --------->LBD16 --------->DEAR3(1) ------NtERF2 ---------LBD16 -------->ATERF1(1) --------ATERF1(1) ---->NtERF2 ------>DEAR3(1) -------DEAR3(1) ----->ATERF1(1) -------HVH21 ----ANAC58 --->bZIP60(1) ----bZIP60(2) ----ANAC58 ----TGA2(1) ----bZIP60(1) --->TGA1a                                                                       --------->ARR14(2) ----O2                <---------DOF5.7(2)                                       <---------ARR11(3) --->O2               --------->WRKY12                                           <---------ARR14(2) ----TGA1a            --------->WRKY38(1)                                        --------->ARR11(3) --->TGA2(1)          --------->WRKY45                                           --------->GLK1(2) ---->STF1           --------->DOF5.7(2)                                   <------NtERF2 <---------At4g35610 --TGA2(2)         <---------O2                                            <---------------------WRI1 -->HVH21          <---------ANAC46              <-----------------AGL1--------->CCA1(2) <-------GAMYB -->TGA1           --------->O2                 --------->MYB52(1) <------ZmHOX2a(1)----------->HVH21 ====MYC_MYB   <-----------HVH21     ----------->GT1    --------->ALFIN1 <---------DEAR3(1)    <-----   tcgccggagaaaatgaaggtcacgttgacgaagatggagaggtgaatagttatcggaagtggccagagaggagagacggcgaaaatctgacagttgattc  23294100                                                                       <---------ANAC58                                                                       <---------ANAC58                                                                 --------->ATHB12                          <---------YAB1                      <---------ANAC58            ----------->TGA1                                  <---------ANAC58    <---------LBD16    <-------TEIL                          --------->HSFC1(2)  ----------->HVH21   <--------P                 <---------TOE1(2)    ---------->ID1          <------ --TEIL     ----------->HVH21       ----------->GT1          <---------HSFC1(2)         <---------AHL20(2)   atcttcgacgggaaatgacgagaggttgatgagtgagattgaaaaaaatcgaatgttttgggaagcttgtttggcttcttaatagtctattttatgttcg  23294200  Previous    Next  AGI:  At3g62990.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G47950.1) Range:  from: 23293748    to: 23294343    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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