Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   ---------->DOF2           <------MYB46(1)           <------MYB83          <---------MYB46(3)                                                                      <--      --------->ICU4                                                                             ----      <---------YAB1  ---------->DOF2                                                           <----    <---------At4g35610                  <------ZmHOX2a(1)           <----------DOF2           <----- ---->DOF2<---------AtMYB61        --------->DAG2      --------->ALFIN1   <---------MYB59      ------ -------AGL15  <------NtERF2      ---------->DOF2      <---------ANAC46  --------->ANAC55(2)   <----- >TOE2(3)<---------WOX13(1)    <----------ID1       <---------ARR11(3)   <---------ANAC55(2)   ------ --DOF2--------->ATHB12    ---------->DOF2      <---------AtLEC2   --------->At4g35610   <---------ANAC46   agtgagagatgattggtggcaaagaaaaggaaagggaaaaggaggaatttgcaagatgtgtggaatagcagctttacttaacttccgagttgtttgggat  23281200                                                               --------->TOE2(3)                                                            ------->GAMYB                                                           --------->MYB46(3)                                                           <---------MYB111(1)                   <---                                                           <---------MYB111(2)             ------>ZmHOX2a(2)       --------->GLK1(2)                           --------->ALFIN1                       <------ZmHOX2a(2)       <---------ARR14(2)                          ----------->GT1                       --------->ARR14(2)       --------->ARR14(2)                        <---------bZIP60(2)                     <---------ARR14(2) --------DOF2                                    <---------ANAC58                      <---------DEAR3(2) -->ZmHOX2a(2)                                   <---------ANAC46                     --------->ETT(1) --ZmHOX2a(2)                            <---------YAB1    <---------MYB52(2)       <-----------HVH21 ----ARR14(2)                         --------------->AGL15<---------MYB46(2)      <-----------RAV1(1) --->ARR11(3)      <---------WOX13(1) <----------DOF2   --------->MYB46(3)   ====================HOX2a_HOX2a ----ARR11(3)   <---------YAB1  ---------->DOF2<------ZmHOX2a(1)             =====================HOX2a_HOX2a --->ARR14(2) --------->YAB1   <------ZmHOX2a(1) <---------ANAC58            ------>ZmHOX2a(1) ------   ctttgggagaatccaattgtaattggtatgtaaggaaagtctttttataggacgtgtaacaactaccttcattcacttcctgtctctgtcggatccaaat  23281300                                                         ------>ZmHOX2a(1)                                                     ------>ZmHOX2a(2)                                                    <------ZmHOX2a(2)                                                    --------->GLK1(1)                                                    <---------GLK1(1)                                                   --------->ARR14(3)                                                   --------->ARR14(2)                                                   <---------ARR14(2)                                                   <---------AGP1                            <---------MYB59        --------->AGP1                   ---------->DOF2                 --------->ARR11(3)          <---------ANAC58 --------->ANAC58        <---------ARR11(3)          <---------ANAC58 --------->ANAC46       <---------CCA1(2)     <-----------GT1 ------GLK1(2) <---------ANAC46            <---------CCA1(2) --------->ANAC46 <---------AHL20(2)   -- --->ARR14(2) <------NtERF2--------->ANAC58<---------At4g35610       <---------ICU4            <-----   attctctgactagcgcgtcgtaaaagcatacccaattctctcttcatctctcagatctcctaaacgtcccatttttacaaataatcgactgtctaattaa  23281400                                                                                               <-----                                                                                              ------>NtERF2                                                                                              -------                                                                                             <-------                                                                                             --------                 <---------TOE2(3)                                                           <-------                 <---------TOE1(3)                                                          <--------                ---------->DOF2    --------->ANAC46                                         ---------      --------->ANAC46             <---------ANAC55(2)                                  <---------At5g28300    --------->ANAC46               --------->ANAC58                               --------->ICU4   <-   --------->ZAT18                 --------->ANAC58                        --------->YAB1--------->MYB46(3)   <---------ZAT18                 --------->ANAC55(1)                    <---------ATHB12 --------->MYB52(1) --------->REM1(2)                 --------->ANAC55(2)                  --------->WOX13(1)------->GAMYB ------------->AtSPL8              ----------->GT1                  --------->GLK1(2)  <-----------GT1 ------GT1   --------->YAB1--------->AtLEC2 ---------->DOF2    ---------->DOF2    <---------YAB1   <-   ccttgtacaccacaattttaaagttgttcatgcaaaaacgtaacaacaaagtgagtattggataaaaaagaatccaatcagaacattattaactgccggc  23281500                                             <-------MYC3 <------ZmHOX2a(1)                           <-------MYC4 -NtERF2                                     <-------MYC2 -->LBD16                                    ------->MYC4 --ATERF1(2)          --------->AHL20(2)     ------->MYC2                       <---------GLK1(2) ->ATERF1(2)       --------->TOE2(3)         ------->MYC3                      <------MYB46(1) --ANAC46          ----------->GT1          <---------O2                      --------->MYB59       - -LBD16   ----------->GT1  ------------>CBF --------->O2                      <---------TOE2(3)     - >RAP2.6(3)--------->At5g28300  --------->YAB1                              --------->ICU4          < --------TOE1(3)   --------->TOE1(3)        <---------TGA1a            ----------->GT1  <----------DOF2 --------TOE2(3)  ----------->GT1           --------->TGA1a       <------NtERF2<------MYB83  --------   taaggaagggcatggtaaaaacgttaaaatccaataagaaatgtacacgtgtagtaatcagtttaggccgagtctgtaattaggttctcgcttaatagtt  23281600                                                              <---------ARR14(2)                                                              --------->ARR14(2)                                                              <---------GLK1(2)                                                          --------->At4g35610                                                          <---------At4g35610                                                         ----------->RAV1(1)                                                       --------->ZAT2                                                       --------->At4g35610                                                       <---------At4g35610                                                      ----------->RAV1(1)                                                    --------->At4g35610                                                    --------->ZAT2                                                    <---------At4g35610                                                   ----------->RAV1(1)                                                 --------->ZAT2--------->GLK1(2)   --------->YAB1                                <---------At4g35610 ------->HAHB4                                   --------->At4g35610                    <----------DOF2 -------->YAB1                                --------->At4g35610                 ---------->DOF2  <- ---------ICU4                <-----------HVH21 ----------->RAV1(1)         --------->LBD16        -- --->GT1*TSS  <------ZmHOX2a(1)               <---------At4g35610         <---------LBD16          --   aataatcgtgatgggaggaagtgctagtctccagtcagactcgatggaagcagcagcagcagcagattcttcgattcccagagacaaagactttggcaaa  23281700                 <----------DOF2                   --------->LBD16             ------>ZmHOX2a(1)                    --------->HSFB2a(2)                           <----         --------->ARR14(2)                       <---------HSFB2a(2)                       ---------         <---------ARR14(2)                 --------->ATHB12                       <---------ANAC46 - ----------------AGL2                 <---------CCA1(2)                         --------->GLK1(2)  -- --------------->AG        --------->ARR14(2)    <---------LBD16               <---------GLK1(2)<---- --------------->AGL1      <---------ARR14(2) <---------GLK1(1)     --------->GLK1(1)  ----------->HVH21   ttccaattcgggttcctctctttcccttggattcgatttcatctcttgatttctgggaactatctctctgatttcttcaacgattctgtgtaacagatgc  23281800                                                           <------NtERF2          --------->CCA1(2)                               <---------RAP2.6(3)       --------->MYB52(2)       --------->ANAC46                                   ------>NtERF2--------->MYB46(3) -----ANAC58                                             <---------ATERF1(2)       <-------TEIL  ---- >At4g35610                --------->GLK1(1)             --------->RAP2.6(2)      <---------MYB52(1) -------->ZAT6             <---------GLK1(1)             --------->RAP2.3(2)      <---------ARR14(2) ------->ZAT18             <---------At4g35610           --------->RAP2.3(3)    <---------MYB46(3) -----ANAC58   ----------->GT1                           --------->ATERF1(2)  <---------LBD16 ------>ZmHOX2a(1)   gagcactacaagagacgatgtaaaatcagagctccttgctgcaatctcatcttctcatgccgccattgccacaacgactctgcggttcgttctctcctcc  23281900               <---------ANAC58     <---------ZAT2     <---------GLK1(1)                                                                    ------>ZmHOX2a(1)     <---------At4g35610                                                                ------>ZmHOX2a(2)     --------->ZAT2               <---------ANAC46                                  ------>ZmHOX2a(1)     --------->At4g35610          <---------ANAC58                                ----------->RAV1(2)     --------->GLK1(1)        <----------DOF2                             --------->ARR14(2)     ---- --------->YAB1<---------ANAC46   <---------AtLEC2                        --------->GLK1(1)      ---- -->ZmHOX2a(1) <---------ANAC58   <---------ANAC58       <----------DOF2  <---------GLK1(1)----------   taatcagagctccccttgcttgctctctctctctttgcttgtctaaaacaacattgctgctttcttcttgtttcagaattctcttcctgatcctaaagaa  23282000             --------->LBD16            --------->ANAC58            --------->ANAC58           --------->SPL7        <------MYB83        <------MYB46(1)                                                                  --------->ARR14(2)   --------->ATHB12  <-----------HVH21                                           <------ZmHOX2a(1)  --------->ICU4     --------->TOE2(3)                            <---------TOE2(3)      <---------ARR14(2)  <---------YAB1    <----------ID1                     --------->TOE2(3)       <---------TOE1(3) ----->ANAC58<------NtERF2                 --------->TOE2(2)      <---------TOE1(3)      <---------GLK1(2) ----->ANAC58------>NtERF2         <---------ANAC58    --------->YAB1          <---------TOE2(3) >DOF2 --------->MYB59             <---------ANAC58    --------->TOE1(3) <---------------AGL15   cgtcatgatttggtccgccaaaacgtcaaacaggtttgcttaaaacctgtgtttcaatcttaactcttaaggtttgtatttaaggaaattggattctcta  23282100  Previous    Next  AGI:  At3g62970.1    Description:  protein binding / zinc ion binding. similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT5G18650.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22409.1); contains InterPro domain Zinc finger, CHY-type; (InterPro:IPR008913); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 23281608    to: 23283898    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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