Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                   <------NtERF2                                --------->LBD16                               --------->ANAC46                                                     -                              <---------LBD16                           --------->ANAC58        >>>>>                              <-------MYC3                         <---------ETT(2)             >>>>>                              ------->MYC3                      <------MYB46(1)                 <----                             --------->ANAC46      --------->GLK1(1)    --------->ANAC58        >>>>>        --------->MYB46(3)   <---------O2     ---------->DOF2   <------MYB83         <------ZmHOX2a(1)   ctgtaaaaaaaccatcgaatcgaaactaaacacgcggcaatcggagaataaagagttccaaatggaaggtcgataagccttcaaataggataacaacttg  23265400           --------->ANAC58                                       <---------ARR11(3)           --------->ANAC55(2)                              ------>MYB83           --------->ANAC58                               <---------MYB111(1)   --------->TOE1(2)                                      <---------MYB59   --------->TOE2(2)                                     <---------ANAC55(2) ------>MYB46(1)                                         --------->ANAC55(2) ------>MYB83                 <------MYB83     <---------ICU4>>>>>>>>>MYB98 -------->WOX13(1)            <------MYB46(1) --------->ICU4------>MYB46(1) >>>>>WRKY43      <-----------GT1             <---------YAB1--------->MYB52(1) >>>>>WRKY38     --------->YAB1<-------GAMYB--------->YAB1<---------MYB46(2)                      <-- -----WRKY18(1) <---------MYB52(2)         <---------ATHB12--------->MYB55(1)    <---------AHL20(2) >>>>>WRKY26--------->LBD16   <---------MYB46(3)       <-----------GT1           --------->AHL20(2)   accaatctacgatgcgcaattaacatggtgttcggttgcacttaaatcataatgaaattacctaacaaaatcatctataacatttaaacacataccatat  23265500                                                      ------>MYB83                                                    <---------MYB59                                                    <---------MYB111(1)                                    <---------ARR11(3)------>MYB46(1)                             ----------->GT1      -------->P                            --------->DAG2        ------>MYB46(1)                           ---------->DOF2  <-----------GT1                  --------->MYB52(1)--------->ARR11(3)--------->MYB52(1)                  ---------->DOF2  --------->CCA1(1)<---------MYB111(2)            <---------ZAT14                <---------MYB59--------->AHL20(2) ------>MYB83            ---------->DOF2      <----- ---------GT1   --------->TOE2(3)  --------->RVE1(1)<---------MYB46(2)  <---------YAB1        <------   aaactgcatacacatatacctaaaggtccaaaagtaaatatctatatatccctaccaaactgatgcaatctaatatcaaagagactgaagtaagacaaca  23265600                                                                         --------->ALFIN1                                                                        <------ZmHOX2a(1)                                                                        =============================                                                                        <---------------------WRI1                                                               --------->ZAT2                                                               <---------At4g35610                <--    --------->TOE2(3)                                          --------->At4g35610               ----   --------->REM1(1)                         --------->CCA1(2) ----------->RAV1(2)             <----- ----------->RAV1(1)                    ---------->DOF2        <---------ZAT2--------->At4g35610<---- ----ALFIN1                        --------------->AGL15    <---------At4g35610                ------ ---ZAT14<---------ALFIN1          <---------------AGL15 ---------->DOF2=============================   cagcaacatcaacacttgcacaattcaaaatccaattctcaaaaaagatagaaaactcgtagagcagctgagaaggaggtgctcacaatgtaagagagat  23265700                                                                                                 ---- ===HOX2a_HOX2a                                                                                  ---- -----GAMYB                                                                                    ------ -->ZmHOX2a(2)                     <---------YAB1                                       <---------AHL20(1) ----ARR11(3)                <---------MYB52(1)                                         <---------ARR11(3) --ZmHOX2a(2)               --------->TOE2(3)             ------>ZmHOX2a(1)            ----------->TBP --->ARR11(3)           <---------ARR14(2)       --------->ANAC58            ------>ZmHOX2a(1) <----- ==HOX2a_HOX2a          --------->ARR14(2)       --------->ANAC58            ========================   cgttatcagggtctatgcttccagcgtattcgttagtaatattgtaagagcaagcctctccttcttcaagttcagactcctccataactatatattcgat  23265800                                                      <---------ARR14(2)         --------->ARR14(2)                                                      --------->ARR14(2)         <---------ARR14(2)                                                    ------->GAMYB           --------->ANAC58                                                   --------->MYB46(3)       --------->ANAC58                                                  --------->At4g35610      --------->ZAT18                                                 --------->MYB52(1)        <-------TEIL   --------->TOE2(3)                            --------->YAB1         <---------------AtSPL8      --   --------->TOE1(3)                          --------->ANAC58         <---------TOE2(3)============= ----->YAB1                                   --------->ANAC58         --------------->AtSPL8     --- -->ZmHOX2a(2)           --------->STY1(1)   --------->WOX13(1)      --------->YAB1     ------>ZmHOX2a(1) --->ARR11(3)            <---------STY1(1) ------------>CBF         <---------ATHB12 ================ ----ARR11(3)         --------->ZAT6    <------------CBF          --------->WOX13(1) ------>ZmHOX2a(1) ===HOX2a_HOX2a <---------ZAT6  <----------DOF2<---------ATHB12 ------------>CBF--------->GLK1(1)----   cttaacctcaaaaccctagacttaaccctaggccctttctaacattgcaatcaacagaccctcaaaatcaatcaaggtacacaaatcctcctaaaaatca  23265900           --------->ANAC46           --------->ANAC58   ------->GAMYB           --------->ANAC58 -------->P         --------->MYB52(1) ------>MYB83                                                      -------        <---------WRKY38(1) ------>MYB46(1)                                                  --------        <---------WRKY12--------->ANAC58                                               <---------ARR14(2) ----->GAMYB------->GAMYB  <---------ALFIN1                              <---------GLK1(1) ---------- =============HOX2a_HOX2a  ------>MYB46(1)                <---------ANAC58      <------ZmHOX2a(2) ------>ANAC46   ----------->GT1                          <---------ANAC58     <---------ARR14(2) =============HOX2a_HOX2a  ------>MYB83                  --------->STY1(2)     --------->ARR14(2) --- ---->P<------ZmHOX2a(2)--------->ANAC58   <---------TOE2(3)   <---------------AGL15   --------->ARR14(2)   accccagcgatcaacggaacagtgaaacccaaccccaaatcgtttgatgtattagccctagcttgatcaaattagaaatcggatcagcgaatacaacaga  23266000                                     <---------ARR14(2)    --------->ANAC58                 --------->ARR14(2)                                            --    --------->ANAC58       ------------>CBF                                                        <- >GAMYB                 <------------CBF                                            <------------CBF ->MYB46(3)        ----------->GT1<---------ANAC58          ------------>CBF   --------->At4g35610--- ->RAV1(1)     --------->DAG2     <---------ANAC58<------------CBF          ---------->DOF2     ----- ------->DOF2 ---------->DOF2 <------------CBF ------------>CBF      <------ZmHOX2a(2)        <------   caaagtaagaaacacagaaagtggaaaattgcaattgagtatcgacgaattcaattgaaggaaacaatccgatcgaatgaaagcagaattgagttttccc  23266100                                                                                --------->ANAC58                                                                              ---------->DOF2                                                                             <---------ALFIN1                                                                          --------->DEAR3(1)                                                                         ------>MYB46(1)                                                                         ------>MYB83                                                                       --------->DEAR3(1)              --------->YAB1                                           --------->AtMYB61       --------->At4g35610                                             <---------ALFIN1       --------->LBD16                                                --------->MYB46(3)       ------>NtERF2                                             --------->ANAC46      --------->DEAR3(1)                                  <---------------AtSPL8--------->ANAC58    ------>ZmHOX2a(1)                                    --------->AHL20(2)--------->ANAC46 ------->GLK1(1)                                  --------->WOX13(1) ------>NtERF2 --------GLK1(1)                              ----------->GT1    --------->ANAC58 ------>ARR14(2)                             <---------MYB46(3)  --------->ANAC58   ---------->DOF2 ---->LBD16 <---------KAN4(2)         <----------DOF2 --------->WOX13(1)--------->ABI4(1)          <- ---LBD16--------->DEAR3(1)        ------>ZmHOX2a(2)<---------ATHB12--------->RAP2.6(2)          ----   gatttcctccgccgaatgatcaaaaaatgtgtttcgatctctttcgatgggtaaatcaattaagtacaagccaccacccccaaagccaaaggcccaaacc  23266200                                                --------->MYB52(2)                                              <---------MYB52(1)                                           <------NtERF2                                          <---------LBD16                                          --------->LBD16                                          ------>NtERF2                                         --------->DEAR3(1)                     --------->LBD16    --------->ATERF1(1)                     <---------TOE1(2) <---------ZAT2           --------->SPL7              --------->At4g35610        ----------->GT1                --------->ZAT2       --------------->AtSPL8          <------NtERF2               <---------DAG2       --------------->AtSPL3          --------->ATERF1(1)         <----------DOF2       <---------------AtSPL8          <---------At4g35610      <-----------GT1  <---------TOE2(3) --------->LBD16    <---------ATERF1(1)      <---------AHL20(2) --------ATHB12    <---------LBD16    <---------ATERF1(1)  --------->AHL20(2)            <---------ANAC46 ----->WOX13(1)   <---------LBD16   <---------ZAT18        <---------AHL20(2)  <-----------GT1   aattaagaaatcgtacaatctcccgggttttggtatagggcagccgcggtttgtttgttttttaatttactttatccattttttcttctctacgtgtaag  23266300  Previous    Next  AGI:  At3g62900.1    Description:  zinc ion binding. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G02990.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO22392.1); contains InterPro domain Zinc finger, CW-type; (InterPro:IPR011124) Range:  from: 23260156    to: 23265785    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version