Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                              ---------                                          <---------ICU4                                 <---------ANAC58                               --------->YAB1                                      <---------AHL20(2)                ---------->DOF2--------->TOE2(3)                                  <---------AHL20(2)            ----------->HVH21 <---------YAB1 <-----------GT1            --------->ATHB12 <---------ANAC58            <---------ZAT6   <---------ARR11(3)                        <---------YAB1    <---------ANAC46    <<<<<<<<<TBF1            --------->ARR11(3)          --------->ANAC46         --------->AHL20(2)   gcattcttcttctagtgacaaagaagagaattatcttaagtccaaaattacagatttatacccaaattccatagtcattgaagattaatttgggtggaaa  23256600                                   --------->HSFB2a(1)                                  --------->GLK1(2)                                  --------->ARR14(2)                                  <---------ARR11(1)                                ----------->RAV1(2)                                  ------->TEIL                                      =================                                  <---------ARR14(2)                         --------->At4g35610                 <---------At5g28300       <---------ATHB12                  ------>NtERF2          -                <-----------GT1  <---------ARR14(1)                         --------->DEAR3(1)   ----         --------->ANAC58        <---------GLK1(2)      ---------->DOF2  --------->ANAC58        <---         --------->ANAC58  <---------GLK1(1)         ----------->RAV1(1) --------->ANAC46   --------- -->GT1<------ZmHOX2a(1)   --------->GLK1(1)   <---------GLK1(1)         --------->ANAC58   ---------   aacaatagaggaagcaaattaccgcattgaaatccgaatctgccaatggatttcgccacaaaggaagcctgagaaacgccgcttaaacctggcgaagcaa  23256700                                                                                                -----                                                                                               <-----                                                                                              -------                                                                                             <-------                                                                                           <---------LBD16                                                                                           --------->SPL7      ---------->DOF2                                                                      <-------TEIL   ----------->RAV1(1)                                                               <---------O2 --------->At4g35610                                                                 --------->O2 ==============RAV              ----------->GT1                                  <-----------HVH21 -------->ANAC46              ----------->GT1                               <---------ANAC58 -------- ----->ARR14(2)              --------->DAG2                                 <---------ANAC58<-------- ------ARR14(2)             ---------->DOF2                               <-----------GT1 --------->ALFIN1 >ANAC58             <---------AHL20(2)                            <---------ANAC55(2)   <---------SPL7 >ANAC58           <---------TOE2(3)               ---------->DOF2 --------->ANAC55(2)   <-----------HVH21   atcagcaacaaagcacagattaatgaattgaaaagtgtaaaaactctctaaatcaaagctaatttcaatacctattttacgagcgtcacgaggtccggcg  23256800                            --------->REM1(1)                        <---------At4g35610                        --------->At4g35610 ->NtERF2       --------->MYB46(3) ----ANAC46     --------->DREB2C(2) -->RAP2.3(1)   --------->DEAR3(1)                                                                  < --ATERF1(1)   --------->DEAR3(2)                                 --------->ZAT6                <---- ->LBD16      --------->MYB52(1)    <---------ARR11(3)    --------->ANAC46   ------->TEIL       ----- -DEAR3(1)  --------->MYB46(3)      --------->ARR11(3) <---------REM1(2)--------->YAB1         ------   cataacccatataatccaccggcctgagcttcaacaaaaatctcagacatctatctatacacacactaacacaaacatgaatttcaattggatactagtg  23256900                                                    <---------DEAR3(1)                                                    <---------ANAC46                                                   <---------LBD16                                                 <---------DEAR3(1)                                            --------->ANAC58             --------->LBD16                --------->ANAC55(1)            --------->ANAC58      <---------HSFB2a(2) <------NtERF2           <---------LBD16     <---------MYB52(1)--------->ANAC58       ----------->HVH21      <-------GAMYB --------->ANAC58   <-----------HVH21     ----------->HVH21  --------->ANAC46 ---------At5g28300 ----------->HVH21    --------->ZAT18 -----ICU4<---------ALFIN1   <---------MYB46(3)  --------->ANAC58                            <------ZmHOX2a(1) ---->ATHB12--------->ANAC58 <---------DEAR3(2) --------->SPL7         <---------ALFIN1     <-------- --->ICU4<---------REM1(2)------------>AtMYB77<---------SPL7         ------>ZmHOX2a(1)     --------->MYB59   attaccgtcgcgacacggagaactgactcgacggttagggaagagcacggcacggcggagagcaattcttcctccatctctgcaaaattgaattaggaca  23257000                               <------------CBF                              *TSS--------->ATHB12       --------->AHL20(2)                             --------->SPL7              ----------->TBP                         --------------->AtSPL3     <-------TEIL                         --------->SPL7         --------->ARR14(2)  ------------>CBF                       ------------------>SPL14------>MYB83  <-----------GT1            -------------   <----------DOF2     <---------SPL7  <---------TOE2(3) <---------AHL20(2)  <---------MYB52(1)  <--- --ID1        <-----------GT1<-------TEIL      ------>MYB46(1)--------->MYB52(1)        -------------   aaacccttttgttttgttacctctccgtccgtacattgattaagaaaccaaatattcatttaaataccggttcaattcggttttgtcaaaaccgtacttg  23257100                                                                <---------ANAC58                                                           --------->YAB1                                                           <--------ATHB1                                                           <---------ICU4                                                          <---------ATHB12                                                          <---------ATHB51                                                          --------->ICU4                                                      <------NtERF2                                                     ----------->GT1                                                     ------>NtERF2                                                     --------->RAP2.6(2)                                                    <---------ATERF1(2)                                                    <---------RAP2.6(2)                                                    <---------DEAR3(1)                                                    --------->ATERF1(2)                                                   <---------ABI4(1)                                                   <------NtERF2<---------ANAC58       --------->ARR14(2)                                                   --------->ATERF1(1)                 <---------ARR14(2)  <---------AHL20(2)                              <---------ATERF1(1)               --------->YAB1  --------->AHL20(2)                              --------->ALFIN1               <----------DOF2 -->AtSPL8                                       <---------RAP2.3(3)     <---------ARR14(2) ------ARR11(3)<---------YAB1   *TSS             --------->ALFIN1        --------->ARR14(2) -->AtSPL3 <---------GLK1(1)  <------------CBF   <---------DEAR3(1)     <---------GLK1(1)         ---   atatttaaaatcgatttctgatacacttgttagattgagacaatgagcaagggggcggcaataatagcttatgcaaatcccatctttcatattcgacatc  23257200                                                                  ------->GAMYB                                                                 --------->ANAC46                            --------->ATHB12               <------NtERF2                 <---------HSFB2a(2)                      ------>NtERF2                           ---                 --------->HSFB2a(2)                      <---------ATERF1(1)                     ---             <---------ANAC58      >>>>>>>>>>>>>>>>>LFY  --------->DEAR3(1)                    ------             <---------ANAC46   <---------ANAC58         <---------DEAR3(1)                  --------          <----------DOF2   <---------ICU4              ---------->ID1                       <-------       ------->TEIL        <---------YAB1              <-----------HVH21                    <--------      <---------CCA1(2)  --------->YAB1               <---------ANAC58         ------>ZmHOX2a(2)  --- ------->DOF2<---------ANAC58   <---------ANAC58      <---------ANAC58        <------ZmHOX2a(2)<-----   taaagcttgaatctttcttgtggaacatcatcattcgtgccattgttcacaatgtttcgtcgcctcaacgacattctccgatctcagtctacctccgtat  23257300    --------->AtMYB61    ------->GAMYB   <---------MYB55(2)   --------->MYB46(3)                 --------->ARR14(2) ------>ANAC58                     <---------ANAC58 ------>ANAC46      --------->ARR14(2)<-----------ARR10                    ------>ZmHOX2a(1)        < --->ARR14(2)       <---------GLK1(2)<---------MYB52(1)              <---------At4g35610            - ->LBD16   <---------CCA1(2)   <----------DOF2                   <----------DOF2                  --- --SPL7  <---------ANAC58     <---------DAG2                   --------->At4g35610    ------->GAMYB < -ANAC46 <---------ANAC58  <---------CCA1(2)               --------->ARR14(2)        --------->MYB46(3) ------>ANAC58      <---------ARR14(2)<---------ARR14(2)   <---------ARR14(2)     <---------WRKY38(1) ----ARR14(2)     --------->LBD16  <---------ANAC58<----------DOF2 --------->REM1(1) <---------MYB52(2)   gcgcaaccatcgcgtctctcccgattttcatacctttccgtttcttctcccttctttccacaatccgcttcatcttcctcttgggcaacgaactcatgct  23257400                                                                                    <---------ZAT2                                                                                 <------ZmHOX2a(2)                                                                                --------->ARR11(3)                                                                          --------->O2                                                                          <---------O2                                                                        ------>NtERF2       <----------DOF2                                                 <---------RAP2.6(2) --------->GLK1(2)                             --------->ZAT14      --------->ALFIN1<---------At4g35610 ---------GLK1(2)                              --------->At4g35610======================HOX2a_HOX2a -------->ARR14(2)                             <---------ZAT14    ------>ZmHOX2a(1) --------->ZAT2 -------->ARR10  ----------->HVH21        --------->ZAT14         <-----------RAV1(1)  ---------->CDC5 ---------ARR14(2)   ---------->DOF2      <---------ZAT14       ----------->RAV1(2) --------->At4g35610   cagattcttctttttggacttgacaaagacccatttgtccgaacttcactgctcaacatgtattcttcctgtggcgacttgagatcagctcagcgagttt  23257500  Previous    Next  AGI:  At3g62880.1    Description:  ATOEP16-4; P-P-bond-hydrolysis-driven protein transmembrane transporter. similar to unnamed protein product [Vitis vinifera] (GB:CAO40022.1); contains InterPro domain Mitochondrial import inner membrane translocase, subunit Tim17/22; (InterPro:IPR003397) Range:  from: 23255637    to: 23257030    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g62890.1    Description:  binding. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G40405.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40027.1); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885) Range:  from: 23257132    to: 23259038    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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