Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                           <----------DOF2                                   ----------->GT1                                   <------MYB83                 <---------CCA1(2)--------->MYB46(2)         <----------DOF2          --------->MYB111(2)         --------------------->WRI1<------MYB46(1)        <---------ANAC58          --------->MYB59                                                   -        <---------ANAC58          <---------MYB46(3)           ----------->RAV1(1)                  - <---------MYB59 <------NtERF2    <---------AtMYB61      --------->ANAC46                          <- --->AtMYB61   <---------DEAR3(1) --------->MYB111(1)    --------->ANAC58                        <--- >DEAR3(1)     <---------ANAC58  <--------P     ------>ZmHOX2a(1)                                ---- >RAP2.3(3)    <---------ANAC58  <---------MYB55(1)      --------->ANAC58  --------->YAB1     -------   ataccgaattgctttgggcgtctctcaaacaatgggttggtaactttctcctaaaatacacacaacaacaaatctaatgagaaactccaccaagactaat  23254900                                                                            <-----------GT1 ------->HAHB4                                                     --------->ANAC46                 - -------->YAB1                                                     --------->ANAC58              <--- --------YAB1                      --------->DAG2                  --------->ANAC58         ------>NtERF2 ------ICU4                       ---------->DOF2             <----------DOF2            <---------ANAC58 ----->YAB1                   <---------TOE2(3)    --------->RAP2.6(3)   <---------DAG2  <---------ANAC58 -->YAB1                    ---------->DOF2       --------->MYB52(1)     <----------DOF2<---------DEAR3(1)   aataatactcagagaaaaacaaacaatgcttaaaggaaaagctaagagagcataccggcttcttctttgaagccactttaactcccttcttcggtgccta  23255000          --------->MYB52(1)         ------->GAMYB--------->YAB1        <---------MYB55(2)                                                                  ---------        <---------MYB52(2)                                                     --------->ANAC58    --        --------->MYB46(3)                     <---------YAB1                  --------->ANAC46    --      ----------->RAV1(1)               --------->ANAC55(2)                    --------->ANAC58    <-     --------->MYB46(3) --------->At4g35610  <-----------GT1         --------->ZAT14        --------- ------>TEIL        --------->ANAC58    <---------ANAC55(2)          <---------ZAT14      ---------->DOF2 ------ATHB12       --------->ANAC58<-----------HVH21       <-------TEIL    --------->TOE1(2)     <--   tgaatcaacaacaaacggcgataagcatcagaaacaagagtcacatatcaccatagcatcgatgcattcactatacaaactacgaaatcaaacaaagcca  23255100                                                                                                 ----                                                                                                 ----                                                                                               ------                                                                                              -------                                                                                             --------                                                                                         ------>ZmHOX2a(1)                                                                                        --------->TOE2(3)                                                                                       ------>ZmHOX2a(2)                                                                                      <------ZmHOX2a(2)                           --------->GLK1(2)                          ---------->DOF2--------->AGP1--   ------>ZmHOX2a(1)      --------->ARR14(2)                     =============================HOX2a_HOX2a >ANAC58                  <---------GLK1(2)                      ============================HOX2a_HOX2a ------->GLK1(2)          <---------ARR14(2)                     <------ZmHOX2a(1)   --------->ARR14(2) ------->ARR14(2)   --------->ANAC58                          --------->HSFB2a(2)    <---------ARR14(2) --------ARR14(2)   --------->ANAC58                --------->At4g35610              --------->ARR11(3) >ANAC58            --------->ANAC46          ---------->DOF2 <---------HSFB2a(2)    <---------ARR11(3) -------GLK1(2) --------->YAB1             <---------TOE2(3)  <---------LBD16        <---------GLK1(2)   gaatcctcagggacataagtataagccagattccaatatagatttgacgaaagaagctcaaattcgaggaaacaaagagctaatacagatcctaaacaaa  23255200                                      <---------SPL7                                     <---------ANAC58                         <---------At4g35610                                     <---------ANAC46                         <---------ZAT2          --------->YAB1             <---------ANAC58                         --------->At4g35610         <---------ATHB12      --------->DAG2                               <---------DEAR3(1) ----->ANAC58                 ---------->DOF2                --------->HSFB2a(2) ----->ANAC58             ----------->GT1                    <---------HSFB2a(2) --->MYB52(1)           ----------->GT1 --------->SPL7      <---------LBD16--------->RAP2.6(3) -->TOE1(2)   --------->At4g35610   <------NtERF2  <---------ANAC46       --------->MYB52(1) ->MYB46(3)---------->DOF2<---------ANAC46   <-----------RAV1(1)     --------->ANAC58 -------->DOF2<---------At4g35610 <---------DEAR3(1) <------NtERF2   --------->ANAC58   cgaaagtggcaatgaaagctgcaaaatggtgtaaaagcggcgtaccattgttgtcgtcgacttctggaggtaagacagacggctgagagcaagagcgact  23255300                                                                    --------->At4g35610  <---------ANAC58                                                                    <---------At4g35610  --------->ANAC55(2)                                                                 ------>ZmHOX2a(1)       <---------ANAC55(2)                                                                --------->TOE2(3)        <---------ANAC46                                                         <---------AHL20(2)              <---------ANAC58                            *TSS                      <---------AHL20(1)                 <---------ANAC55(1)                      --------->YAB1                  <---------ARR11(3)               <-----------GT1               <-----------GT1    ---------->DOF2     --------->ARR11(3)    <---------At4g35610               --------->ZAT6     --------->ZAT14     --------->AHL20(1)  <-----------RAV1(2)       <---------ANAC46  ---------->DOF2    <---------ATHB12 <-----------GT1--------->At4g35610   cttagggttttgtgttttcactatttataaagacactgaagcccaaatgatacaaatattttttttcctcagaagcccagatgagaaaattacgtttttg  23255400                                                                              <----------DOF2                                                                             ------>ZmHOX2a(2)                                            --------->AHL20(2)        <-------TEIL --------->ARR11(3)                                     --------->ANAC58             --------->ARR11(3)    <------------CBF                 ----------->GT1    ----------->GT1--------->YAB1     <----------DOF2 <---------ANAC55(2)                 --------->ANAC58   --------->ANAC58   <---------ARR11(3)       < --------->ANAC55(1)             --------->ARR11(3)     --------->ANAC58   --------->ARR11(3)     <-- --------->ANAC58     --------->ARR11(3)   --------->AHL20(2)     <---------AHL20(1)   <-----------GT1 --------->ANAC55(2)  <---------ARR11(3)   <---------AHL20(2)  <---------AHL20(2)  <---------ARR11(3) --------->ANAC58     <---------GLK1(2)--------->AHL20(2)      --------->AHL20(2) <---------CCA1(2) -   gacacgtattgctctctcaatatagattttctgaatatcaagaaaataatttttcgtcaagaaaattatatattcatgatctttatatcttactttctat  23255500                                                   --------->ARR14(2)                                                   <---------ARR14(2)                                                   <---------ARR11(3)                                             --------->MYB46(3)                                  --------->AHL20(2)  <---------YAB1                                  --------->AHL20(1)  ----------->HVH21                                  <---------AHL20(2)<------ZmHOX2a(2)             --------->MYB52(1)  --------->AHL20(2)--------->ARR11(3)        <---------AHL20(2) <---------HSFB2a(2) --------->MYB52(1)       --------->AHL20(2)  --------->HSFB2a(2)------->GAMYB   <---------AHL20(2)   <---------YAB1       <---------MYB52(2)   <---------YAB1<---------ARR11(3)        --------->MYB52(1) ---------AHL20(2)<---------CCA1(1)     --------->ANAC46     <----------DOF2 -------AHL20(2) --------->ARR11(3)   <-----------GT1------>ZmHOX2a(2)                            --- -------->AHL20(2)<---------RVE1(1)<---------ICU4--------->HSFB2a(1)       ---------->DOF2 ----------   atttttttattaaatcaacgatattttttatagaaaaaaattacacaacgaacgatctgatagcttttagtattcaaaaaagcatatagaacaaaaagaa  23255600                                                                    <---------ANAC58                                                      <---------ANAC58                                                      <---------ANAC46                                                      ----------->GT1                          --------->AHL20(2)          <---------ANAC58    ------>ZmHOX2a(1)          ----------->GT1 <---------AHL20(2)       --------->ARR14(2)<----------DOF2 ------>YAB1      <-------TEIL                     <---------ARR14(2)<---------GLK1(1) >DOF2---------->DOF2  --------->YAB1 ----------->GT1<-------TEIL   <---------ANAC58               <-   tcatatcaaaaagagtgaaatacatttataaattttgaagtagaaaaatggtggattcgtgaataaactggctttcctaagaaacagcatggctattaac  23255700         <---------AHL20(2)        --------->AHL20(2)                                                    --------->YAB1      ---       <---------YAB1                                            --------->TOE2(3)                <--   <---------DAG2                                      ----------->GT1     --------->YAB1   <--------   <----------DOF2           <---------AHL20(2)   <---------CCA1(2)     ----------->GT1--------->AtLEC2 ------TEIL            <---------TOE2(3)       --------->ZAT6 <-----------GT1--------->ICU4 ---------   atacactttattaaaaatcagttttgatgttttaatttttctatgactatctctatcttgtaaataacattatacagtaataagcattgatgcaaatacg  23255800  Previous    Next  AGI:  At3g62870.1    Description:  60S ribosomal protein L7A (RPL7aB). Identical to 60S ribosomal protein L7a-2 (RPL7AB) [Arabidopsis Thaliana] (GB:Q9LZH9); similar to 60S ribosomal protein L7A (RPL7aA) [Arabidopsis thaliana] (TAIR:AT2G47610.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49218.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49049.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN81023.1); contains InterPro domain Ribosomal protein L7Ae; (InterPro:IPR004037); contains InterPro domain Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038); contains InterPro domain Ribosomal protein L7A; (InterPro:IPR001921) Range:  from: 23253640    to: 23255328    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g62880.1    Description:  ATOEP16-4; P-P-bond-hydrolysis-driven protein transmembrane transporter. similar to unnamed protein product [Vitis vinifera] (GB:CAO40022.1); contains InterPro domain Mitochondrial import inner membrane translocase, subunit Tim17/22; (InterPro:IPR003397) Range:  from: 23255637    to: 23257030    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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