Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                          --------->ANAC58                        --------->ANAC46                      <---------YAB1                      <---------ALFIN1                      --------->YAB1                     --------->ZAT14                        <---------ICU4 <---------AHL20(2)    ----                     --------->ZAT18                       <---------YAB1<---------RVE1(1)     ------               <---------At4g35610             <---------WRKY18(1)      --------->ARR11(3)   --------              ------->TEIL                    --------->WRKY38(1)    <------ZmHOX2a(1)       --------         --------->YAB1 --------->ANAC58      --------->WRKY12--------->ICU4        <---------ANAC46-  <-----------GT1    <---------ZAT18     <---------ALFIN1  --------->ICU4<---------CCA1(1)   -------- ------>AHL20(2)     <---------ZAT14 ----------->RAV1(2)<---------YAB1  <---------ARR11(3)   <-------   ttaaatacctctcatgaagctactgcactccattccataacctgcacattgaccaattcttattattattaggagatttttttgttttgtgaatcaagta  23252800        --------->ANAC58       --------->DAG2      ---------->DOF2 ----------->GT1             <---------AHL20(2) ----->WOX13(1)              --------->AHL20(2)                                   <---------LBD16 --->AHL20(2)   <---------AHL20(2)                     <-----------GT1           <---------LBD16 ->ANAC58      --------->AHL20(2)                   <---------ZAT6            <---------ZAT2 ->ANAC58      <---------AHL20(2)                 <------MYB83      <------ZmHOX2a(1) -------->YAB1 --------->AHL20(1)                 <------MYB46(1)<---------At4g35610               -- --->GT1--------->ANAC58  --------->YAB1    <---------ZAT14      <------NtERF2--------->ZAT2       -- --ANAC55(2)   <---------AHL20(1)         <---------YAB1         --------->At4g35610       >>>>>>>>>TBF1   aatcagaaaaaagcaaataaaattggattaataaaacttctattagtatagttggtgttaccatggcagaggaagactagagctcggggagaagaagaag  23252900                                                                                            ---------             --------->ZAT18                                                               --------->YAB1          --------->ANAC58                                                                <---------YAB1          --------->ANAC58                                                       ------>ZmHOX2a(2)    <---------At4g35610                                                          ====================    --------->At4g35610                                  <-----------GT1         ==================== ------->ANAC58                                   ------>ZmHOX2a(1)            <---------ARR11(3)  -- ------->ANAC58 --------->MYB46(3)       <---------TOE2(3)     --------->YAB1  --------->AGP1   <----   gaagccatctgcaagcgaacaactcaacgtctctcgagtttttgatgtattcctgtgttttacaatgttaagaacaggcctgatctatatatatcatagg  23253000   <------ZmHOX2a(1) --------->MYB59                                                                               ------ >TOE1(2)                                                                                      <----- =========HOX2a_HOX2a  --------->DAG2   <------ZmHOX2a(1)           <---------ATHB12      --------->TOE1(1) ==HOX2a_HOX2a       ---------->DOF2---------->DOF2               <---------GLK1(1)       --------->TOE2(1) ------->ICU4    >>>>>>>>>TBF1      --------->MYB52(1)      --------->CCA1(2)            ------>ZmHOX2a(1) --ZmHOX2a(1) >>>>>>>>>TBF1  <---------MYB52(2) <------NtERF2     --------->GLK1(1)     <------------   aattaggaacatagaagaagaagaaaaggcaactaaactaaaggatgggcagagagagagagagatggaaatcaagagagacagagacctcctcgtactg  23253100                                                      <---------ZAT2                                                      --------->ZAT2                                                    ------>NtERF2                                                   --------->DEAR3(1)                                            <---------YAB1                                           --------->KAN4(2)                                          <---------KAN4(1)              --------->CCA1(2)                                    <---------ANAC55(2)                 --------->ARR11(3)          < --->HSFB2a(2)       <---------At4g35610 <---------YAB1                 --------->ARR11(1)   -------- ----HSFB2a(2)    <---------At4g35610    --------->ICU4                 <---------ARR14(2) <-------GAMYB -----AGL1  <---------ICU4          --------->ANAC55(2)               ----------->ARR10   <---------MYB46(3)   gaacttgaacttcatcatgctgcttctgatgtctgattaagtgattattctcgccgagcagagggagagagatagatatggaagattgaaggctgttgtt  23253200                                                                          <---------AHL20(2)                                                                          --------->AHL20(2)                                                                          <---------AHL20(1)                                                                          --------->AHL20(1)                                                                       --------->YAB1                                                                      <---------YAB1                                                                      --------->ICU4  <---------AHL20(2)               <----------DOF2       --------->AHL20(2) --------->AHL20(1)         <-----------GT1              <---------AHL20(2) <---------AHL20(1)       <---------AHL20(2)             <---------AHL20(1)                   <------ ---------AHL20(2)        *TSS<-----------GT1   <----------DOF2     --------->YAB1          <-------- --->GT1            --------->ANAC55(2)     <<<<<<<<<<GT-3b        --------->ICU4         --------->YAB1   atatatatttgtagaatgagacacttattttttctctctttcttatttttcttttatattttatttggaataataataaaatggagttttaatcgtaatt  23253300                                               <---------ANAC46                                     --------->TGA2(2)                                    <-----------TGA1                                   <---------O2<---------ANAC58                                   <---------TGA2(1)                                   --------->O2<---------ANAC58                                   --------->bZIP60(1)                                   <<<<<<<<<<HY5                                   <---------bZIP60(1)                                   <---------ANAC55(2)                                   --------->ANAC55(2)                                   --------->TGA2(1)               ----------->GT1     >>>>>>>>>>HY5        --------------->AGL15     <-----------STF1        ----------------->AGL1    --------->RAP2.6(3)        <---------------AGL15     ----------->STF1       ----------------->AGL2    <---------TGA2(2)    <---------ARR14(2)                         ---- ------CBF >>>>>>>>>>>>>AGL25   ----------->HVH21----------->GT1                               ------ -YAB1 ------>ZmHOX2a(2)        ----------->TGA1 --------->ALFIN1      --------->ATHB12 ------->GAMYB   gaaaaatgatcccaaaatagaaaaacgttttgacatgacgtcatactgggcgtgtgaattcgaagcccattattcattggtacaatacaacccaatctac  23253400        --------->ANAC58        --------->ANAC58                                                              ---------->DOF2      ---------->DOF2                                         --------->YAB1      --------->HSFB2a(2)    --------->TOE2(3)                                        <---------ATHB12     <---------HSFC1(1)  <---------YAB1     <---------YAB1                        ------>ZmHOX2a(1)      <---------HSFB2a(2) ----->YAB1     <----------DOF2                    <---------AHL20(2)             --------->HSFC1(1) -->P------>ZmHOX2a(1)        <xxxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)      --------->WOX13(1)     <-   cattatcctaaagccagccttttatgctcgactctccattttctattcgctgtataatttcctatcatatgcaaatatcaatctctagaaaagctcaatt  23253500                                   <----------DOF2                              <---------ALFIN1                                 --------->LBD16                               ------>ZmHOX2a(2)                                 ------>NtERF2                               <---------ARR14(2)   --------->GLK1(1)--------->ANAC58                                         --------->ARR14(2)   <---------ARR14(2)           --------->LBD16                          --------->At4g35610   --------->ARR14(2)          <------NtERF2                           --------->DAG2  <------ZmHOX2a(1) --------->ANAC58                         <-------TEIL<---------At4g35610 --------AtLEC2    ------->TEIL<---------LBD16     --------->ZAT6     ---------->DOF2   tgcaggattccatttttgacgcatgtaatagtccccgcgtttgggcaataccatcactaaatgttcatttcaaaaagctgatccacctctgatgtttaca  23253600                               <---------ANAC55(2)                 --------->AHL20(2)     --------->TOE2(3) <---------AHL20(2)               <---------GLK1(2)--------->TOE2(3)     <------ZmHOX2a(1)         --------->ANAC58      --------->ANAC55(2)   --------->ICU4         --------->ANAC46      <---------ANAC46     <---------TOE2(3)         --------->ANAC58      ----------->GT1 --------->DAG2    --------->YAB1     <---------MYB46(3)     ---------->DOF2          ---------->DOF2    --------->YAB1   cattattcatcaggccagattatatcggttgtaacgtaaaaaccacaataaagtaaggatttattttgcaaataaaagtttatatgtgaaattgataaca  23253700  Previous    Next  AGI:  At3g62860.1    Description:  esterase/lipase/thioesterase family protein. similar to esterase/lipase/thioesterase family protein [Arabidopsis thaliana] (TAIR:AT2G47630.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40021.1); contains InterPro domain Alpha/beta hydrolase; (InterPro:IPR003089) Range:  from: 23250421    to: 23253226    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g62870.1    Description:  60S ribosomal protein L7A (RPL7aB). Identical to 60S ribosomal protein L7a-2 (RPL7AB) [Arabidopsis Thaliana] (GB:Q9LZH9); similar to 60S ribosomal protein L7A (RPL7aA) [Arabidopsis thaliana] (TAIR:AT2G47610.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49218.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49049.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN81023.1); contains InterPro domain Ribosomal protein L7Ae; (InterPro:IPR004037); contains InterPro domain Ribosomal protein L7Ae/L30e/S12e/Gadd45 (InterPro:IPR004038); contains InterPro domain Ribosomal protein L7A; (InterPro:IPR001921) Range:  from: 23253640    to: 23255328    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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