Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                ------>MYB83              ------>MYB46(1)              -------->P                                                                           <-          <-----------GT1                                                      <----------DOF2     --         <-----------GT1                       ----------->GT1          <------ZmHOX2a(1) <----------    --------->ANAC55(2)                      <----------DOF2          --------->MYB59    <---------YAB1    <---------ANAC55(2)             <---------YAB1                  <<<<<<<<<MYB98    --------->AHL20(2)  <-----------GT1          ---------->DOF2   <---------ANAC46     <---------MYB46(3)  <---------AHL20(2) ------->ANAC46       ----------->GT1  ------->TEIL            ------------>MYB.PH3(2)<---------YAB1   caaatcacgtttttccaaccctgatggtcaaaagcgttatgaatgtgctttgtaaaaaactgtttagtttgttaggacatgcttttatattattacaaat  23243000                                                                      <----------DOF2                                                                     <---------ANAC58                                                               ------>MYB83                                                               ------>MYB46(1)                                                               --------->ARR14(2)                                                               <---------ARR14(2)                                                               --------->GLK1(2)                                                              --------->WOX13(1)                    --------->ATHB51                      --------->ANAC58        --------->ICU4                                    --------->ANAC46               --------->ALFIN1    <---------ARR11(3)                                    --------->ANAC58         <<<<<<<<<MYB98    --------->ARR11(3)                               --------->At4g35610  <---------ANAC58 --------AHL20(2)  <---------YAB1                    <---------At4g35610  <---------ANAC58 ------->AHL20(2)  --------->ICU4             --------->WOX13(1)     <---------ANAC58 <---------TOE2(3) -GT1   <---------YAB1             ------->TEIL   ---------->DOF2    <---------ANAC46 <---------TOE1(3)   tttaaatatcatgtttatgctataattgaaaaatacgaacgtcgaaatcactcaaagctcacaccaatctggctttgagtgctaagttagggtttggcat  23243100                                      --------->YAB1                                     <---------ATHB12                                     <---------YAB1                                    ------>MYB46(1)                           --------->MYB52(1)                           ------>MYB83                           ------>MYB46(1)                          --------->MYB55(1)                         <---------MYB111(1)                        --------->ANAC46                        --------->ANAC55(2)                   <---------YAB1   ------>MYB83         <---------ANAC55(1)  ------->GAMYB         <---------ANAC58<---------MYB59          <-----------GT1         --------->ANAC55(2) --------->MYB46(3)--------->YAB1                                 <------         <---------ANAC46<---------MYB52(2)   --------->AHL20(2)                         <---------ANAC58         <---------ANAC58<---------MYB46(2)   <---------AHL20(2)           --------->AHL20(2) <------         <---------ANAC55(2) <---------MYB52(2)<---------ICU4    <---------AHL20(2)      <---------ANAC58 <----------DOF2 <-----------GT1------->TEIL--------->TOE2(3)    --------->AHL20(2)      <---------ANAC46   tgactttgtttacgtgagattaccatacctaacgaacctatcatttcattaattacaaattgagtattaaaaaaacatataatatgtgttttcgtgttgt  23243200                                                                 ---------->DOF2                                                           --------->AHL20(2)           ----------->GT1    --------->MYB52(1)                                     <---------AHL20(2)----------->GT1        -   <---------ATHB12      --------->ATHB12              --------->AHL20(2)    <---------ANAC55(2)    -   <---------ATHB51     <-------TEIL                  <---------ATHB12       --------->ANAC55(2) ---- ---MYB46(3)          --------->YAB1         ---------->DOF2--------->AHL20(2)     --------->YAB1---- ---REM1(1)     <-----------GT1          <---------------------WRI1  ----------->GT1  ----------->GT1   tgcaaataatggactaagtaacaatattcattggtccgattttgaaggaaagttcaatgaaataaataaaagggtaatctcgtaataagagtgaaaaaca  23243300                                                                                         <------NtERF2                                  --------->ANAC46                                      ------>NtERF2                                --------->ANAC46    <----------DOF2                     --------->LBD16                          <---------AHL20(2)        <---------DAG2                     --------->LBD16                          --------->AHL20(2)  <---------GLK1(2)                        <---------LBD16 -------->TOE2(3)      ----------->GT1        <---------ARR14(2)                      <---------LBD16 -------->TOE1(3)  --------->ANAC58           --------->ARR14(2)                      <---------HSFB2a(2) ----->ANAC58      --------->ANAC58   ---------->DOF2        *TSS                 <---------At4g35610 ----->ANAC58      --------->ANAC46----------->RAV1(1)  <-----------GT1           --------->At4g35610   agccttaacctgtaaacgcttacgctagttaaatacacaacaaagaccgattcgcttttcactctctcgttcaaggtccgactcagttcccggcgagttc  23243400                                                                                    --------->HSFB2a(2)                                                                                    <---------HSFB2a(2)                             <---------AHL20(2)                                    ------>ZmHOX2a(2)                   <---------HSFB2a(2)                                           <---------ARR11(3)                   --------->HSFB2a(2)                                           <---------ARR14(2)                   <---------HSFC1(1)       --------->ATHB12                     <---------AGP1                   --------->HSFC1(1)      <---------YAB1                        --------->ARR14(2)                   ------>ZmHOX2a(1)      <---------TOE2(3)                      --------->AGP1       <---------WOX13(1)   --------->AHL20(2)                                   --------->ARR11(3)     --------->ATHB12       <---------AHL20(2)              <<<<<<<<<MYB2     <---------HSFB2a(2)     <---------MYB46(3)     --------->AHL20(1)     ------>ZmHOX2a(2)          --------->HSFB2a(2)   --------->At5g28300      <---------AHL20(1)<---------WOX13(1) <---------CCA1(2)<------ZmHOX2a(2)   gactcggtgattgattttttcctagaaaaataaaatttcttcttaacgattgatcgattttggttttctatctttcgattctagatctagaattcaattt  23243500                                                         ------->GAMYB                                                         --------->DEAR3(1)                                                        --------->MYB46(3)                                                        --------->DEAR3(2)                                                        <------------AtMYB77                                                     ------->GAMYB                                                     --------->MYB46(3)                                                     <---------MYB55(2)                                                     --------->AtMYB61                                                    <---------MYB55(2)                                       --------->O2 <---------MYB52(2)                                       ==============================MYC_MYB                                       --------->ANAC58 <---------MYB55(2)                                       ======================MYC_MYB                                       <---------TGA1a -------->P                                       --------->TGA1a--------->MYB55(1)                                       --------->ANAC58------>MYB83                                       =====================MYC_MYB                                       =====================MYC_MYB                                       <---------O2-------->P     <---------YAB1                                       --------->ANAC46------>MYB46(1)              --------->YAB1                            --------->WOX13(1)     --------->ANAC58          xxxxxxxxxxxxxxxxx>smallRNA(se3)                     <---------ZAT2    ======================MYC_MYB      --------->ANAC46                     --------->ZAT2 <------NtERF2 --------->WOX13(1)      --------->ANAC58                     <---------At4g35610  --------->MYB52(1)     <---------ANAC58  <---------ATHB12                     --------->At4g35610 ----------->HVH21  --------->DEAR3(1)    ------>MYB46(1)                   --------->ZAT18 ------>NtERF2<------ZmHOX2a(2)<---------ANAC58 ------>MYB83              <---------ANAC58     ----------->RAV1(1)--------->MYB52(1)  --------->ANAC58          <              <---------ANAC46    --------->DEAR3(1)--------->MYB46(3)<-----------GT1            <---              <---------ANAC58    ----------->HVH21--------->ANAC58<---------ICU4--------->WOX13(1) -   gtgaggtttggagatggcgagcgagctgatcaatcggcgacacgagacggatcaaccaaccgccgatgcttattacccgaaaccaatcaaaccatggttc  23243600               <---------ANAC58               <---------ANAC58               ----------->GT1              <-------TEIL           <---------At4g35610           --------->At4g35610         --------->SPL7       --------->REM1(2)       <-----------HVH21      <---------ZAT14 ----------->HVH21            --------->ZAT14                                              <--------- -----------HVH21           --------->LBD16                                        <-----------GT1 ------At5g28300<-----------HVH21                                              <<<<<<<<<MYB2 -------->At5g28300        <---------ANAC46                               <----------DOF2 <----------   acggtgactcgtccgatgcgttacatgctccgtgaacagagacttatcttcgttctcgttggcattgcaatcgctactttggttttcacaattttccctc  23243700                                                    ----------->HVH21                                        --------->ANAC55(2)                                        --------->ANAC58            <---------LBD16                                        --------->ANAC58        <---------HSFB2a(1)                                        <---------ANAC55(2)     --------->HSFB2a(1)                                       <---------LBD16       --------->TOE2(2)                                     <---------ARR14(2)      <---------SPL7                                     --------->ARR14(2)    --------------->AtSPL3           -------->P               <-----------HVH21      <---------------AtSPL3          <-----------GT1        <-----------------AGL1   ------->TEIL------>NtERF2        <---------ATHB12         <---------LBD16   --------->DEAR3(2) --------->LBD16          ------   --------->ANAC58         ------>ZmHOX2a(1)      <---------MYB55(2)<---------RAP2.6(2)=============   --------->ANAC58       ------>ZmHOX2a(2)    <---------ETT(1)<---------TOE1(2)        =============   --------->ANAC46      <------ZmHOX2a(2)  <---------ARR14(2) --------->SPL7           <------ZmHOX2a(1) <---------ALFIN1   <---------LBD16--------->LBD16 --------->MYB46(3)<---------ANAC46--------->At4g35610 --GT1 --------->ANAC58 <---------ARR14(2)  --------->ARR14(2) <---------TOE2(2)   <-----------RAV1(2) -GT1  --------->ANAC58 --------->ARR14(2)  --------->GLK1(2)--------->TOE1(2)  --------->ZAT2 ------   gctccacacaatcaaccccttactcggatcctttctccggttacggaatccgacccgacgaatcgtacgttccggctatacaagctcagaggaaacctag  23243800                                <------NtERF2                                ----------->GT1                               --------->LBD16                               ----------->GT1                                                     <-                  ------>ZmHOX2a(2)                                                               <--                 <------ZmHOX2a(2)                                                              -----                <---------ARR14(2)                                                              <----                --------->ARR14(2)                                                   <---------MYB46(3)                <-----------ARR10   --------->HSFB2a(1)                              --------->ABI4(2)            <---------LBD16   <---------ANAC46                                      <---------AtMYB61        ----------->HVH21  ------->GAMYB                                            <---------DEAR3(1)      ==============================RAV                                             --------->ALFIN1<      ----------------->AGL1 <---------LBD16                                       <---------MYB52(1)      ----------->RAV1(2) --------->MYB46(3)                                 ----------->HVH21 <----- >MYB46(1) ------->TEIL   <-----------RAV1(2)             ---------->DOF2  <---------MYB46(3)<------- =======================HOX2a_HOX2a---------->TaMYB80  --------->ANAC58 <---------MYB46(3)   -------- ========================HOX2a_HOX2a<---------HSFB2a(1)--------->ANAC46<---------AtMYB61     <------- >MYB83--------->TOE1(3)----------->RAV1(1)            --------->ANAC58--------->ALFIN1--------->ALFIN1   cctcgagtacctgaaccggatcggagcaacaggcgggaaaatcccactgggattgaaacgcaaagggctaagagtggttgtgaccggtggtgctggattc  23243900  Previous    Next  AGI:  At3g62830.1    Description:  UXS2 (UDP-GLUCURONIC ACID DECARBOXYLASE 2); catalytic/ dTDP-glucose 4,6-dehydratase. similar to UXS4 (UDP-XYLOSE SYNTHASE 4), catalytic [Arabidopsis thaliana] (TAIR:AT2G47650.1); similar to unknown [Populus trichocarpa] (GB:ABK94298.1); similar to unknown [Populus trichocarpa] (GB:ABK92487.1); similar to UDP-glucuronic acid decarboxylase 2 [Populus tomentosa] (GB:AAX37335.1); contains InterPro domain NAD-dependent epimerase/dehydratase; (InterPro:IPR001509); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040) Range:  from: 23243361    to: 23246542    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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