Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         --------->ANAC46    <---------ZAT14    <---------ETT(2)                                                                <---------GLK1(2)    --------->ZAT14                                                               --------->LBD16    --------->ETT(2)                        <------ZmHOX2a(1)                --------->At4g35610 ---->DOF2                         <------ZmHOX2a(1)                         <---------At4g35610   <- >HSFB2a(2)    <-----------GT1 --------->TOE1(2)                           <--------P   <-----------RAV1(1) -HSFB2a(2) ----------->GT1    --------->TOE2(2)                          <---------MYB52(1) <-------   agtctgtccacagaatgtaacattacatctaaatctaggagcatgaggaggcccttctctctcattcgcatacactggtagctccagattatgttgcagg  23238100                                                                                         <---------GLK1(2)            --------->WRKY38(1)                                     ---------->DOF2   --------->YAB1            --------->WRKY12                                     --------->YAB1    <---------CCA1(2)            ----------->HVH21                                  ------>MYB46(1)  ------->MYC3          <---------At4g35610                                  ------>MYB83     <-------MYC3          <-------GAMYB                                      <---------MYB59   <---------ANAC46  --------->ANAC58             ------>ZmHOX2a(2)          <-----------GT1  <------ZmHOX2a(2)  --------->ANAC58             =============================HOX2a_HOX2a   --------->ARR11(3)        < --------SPL7    <----------DOF2                     =============================HOX2a_HOX2a       = --AtLEC2 --------->At4g35610<---------ARR11(3)      <------ZmHOX2a(1)    <---------ARR11(3)        -   gcatacgcttgcagttgacctttgtatacatgatccatctctatctaaactggcaggaattaaccaaacataaagagatcaacgtgtatcagaatttctc  23238200                                                        ---------->DOF2                                                     --------->YAB1                                                   ------>MYB46(1)                                                   ------>MYB83                                                 ------->GAMYB                                                --------->MYB46(3)                                              --------->WOX13(1)                                             <---------WRKY38(1)                                             <---------WRKY45 <---------ARR11(3)           --------->MYB52(1)   --------->GLK1(1)<---------MYB59                                 ---- --------->TOE2(3)              <---------GLK1(1)--------->AtMYB61 <---------ICU4    <---------GLK1(2) ---------------AGL15   ------->TEIL         <---------WRKY12 --------->ARR11(3)  --------->YAB1----- ==================================================================================================== -------->YAB1     --------->CCA1(2)        --------->WRKY18(1)<------ZmHOX2a(2)------->TEIL    <----   aaacataaatggcaaacgaagagacgaatttcagatttcagaattggtcaaccaaacataaagagatcaacatgacaacatgtatcagaatttctcaaac  23238300                                                         <---------SPL7                                                        <---------ANAC58                                                        <---------ANAC46                                                        <---------ANAC58                                               ------>ZmHOX2a(2)                                  <--       --------->MYB52(1)                    --------->ARR11(3)                             --------- ----->TOE2(3)                               <---------ARR11(3)                             --------- ---->YAB1     --------->CCA1(2)            --------->YAB1              --------->TOE2(3) --------->GLK1(2) ===========MADS_MADS                      <---------ATHB12     <------ZmHOX2a(2)   ---------->DOF2-- -----------AGL15   ------->TEIL<-----------HVH21      --------------->AtSPL3 ---------->DOF2  <-----   ataaatggcaaacgaagagacgaatttcagaattggtcagactcaatgatctagggtttcgtacagatcgataacatcaaaacagcgaaaggaatctacg  23238400                                                                                                    -                     <----------DOF2                                                                -                --------->SPL7                                                                      - -------YAB1--------------->AtSPL8                                                                  - >TOE2(2)   <---------------AtSPL8                            --------->YAB1                 -------- >TOE1(2)   <---------------AtSPL3                     --------->ZAT18           <---------WOX13(1) < ------->YAB1   ------->TEIL ----------->GT1      <------ZmHOX2a(1)---------->DOF2     *TSS  <------- ----YAB1   --------------->AtSPL3    <---------HSFC1(2)   --------->WOX13(1)  --------->ATHB12    --   attataaacacaaaatcgtacctctttgaaatggtgaagacacttcgagggaggaagtgaacaatcagacaaagcattcgctgattgaaactcatcgaga  23238500                                             <-------TEIL                                            --------->CCA1(2)                                            --------->GLK1(2)          --------->ZAT14                   --------->ARR14(1)          --------->ARR14(2)               <---------ARR14(2)      <---------ICU4                       <---------GLK1(2)     --------->ICU4                        --------->ARR11(1)   --------->YAB1                          --------->ARR14(2)  <---------YAB1                          <---------HSFB2a(1) -------->TOE1(3)                    --------->ANAC58 -------->YAB1                       --------->ANAC46                  ----------->ARR10 -------->TOE2(3)----------->GT1     --------->ANAC58                  <---------YAB1 -------------->AGL15              --------->CCA1(2)                  <---------KAN4(2) ->HSFB2a(2)    <-------MYC3      <---------ARR14(2)          <---------WRKY18(1) ---------------AGL15             --------->ARR11(1)        <----------DOF2          <--------------- --HSFB2a(2)    ------->MYC3      --------->ARR14(2)      <---------ZAT2     --------->LBD16    ----- --------------->AGL3 <------------CBF   ----------->ARR10--------->ZAT2   ------>ZmHOX2a(2)  <------   aaccataataagtatacacatgtaaattgtctcaaggatacgaaagattcgggttaacccagcttgaacgggtatgatccgaaataatccattaatgggc  23238600                                                                         <<<<<<<<<CBP60g                                                                         <<<<<<<<<SARD1                                                                        ------>MYB83                                                                        ------>MYB46(1)                                                                      <---------MYB59                                                                   ------>NtERF2                                                                  --------->DEAR3(1)                                                                 --------->ATERF1(1)                                                                 <------NtERF2                                                                <---------RAP2.3(1)                                                                <---------ATERF1(1)                                                                <---------ERF1                      -                                                               <---------DEAR3(1)                  <-                                                               <---------RAP2.3(3)  <---------------AGL15                                                               <---------DEAR4(1)   --------------->AGL15                                      ------->TEIL             --------->ETT(1)    <-----------------AGL2 <------------CBF---------->DOF2    --------->YAB1             <---------At1g77200 <-----------------AG --AGL2        <---------YAB1      <---------ATHB12            <---------DREB2C(2) <-----------------AGL3 ------------>AGL1       ---------->DOF2                    <---------MYB46(3)     ----------------->AGL3 ----ID1     --------->YAB1    ------------>CBF          *TSS <---------ORA47(1)   ----------------->AGL2   caaaattgggcttattcatgaaagttgtaaaggcccaatgaaactcgaagttgatcagaaggttgtcggcgaccaaatttctaaatccaattttgggagg  23238700                ---------->DOF2            <-------GAMYB           <---------MYB46(3)          <---------AtMYB61         <------NtERF2       <---------ANAC46       <---------DEAR3(1)      <------NtERF2      --------->ATERF1(1)                                          --------->ZAT18      <---------LBD16                                              <---------ZAT14     <---------RAP2.3(1)                                           --------->ZAT14     <---------ATERF1(1)                                           <---------ZAT18     ------>NtERF2                                            <---------ZAT14    <---------RAP2.3(3)                                       --------->SPL7    <---------DEAR3(1)                                     <---------ANAC58    <---------RRTF1(3)                                     <---------ANAC46    <---------RAP2.3(2)                    --------->LBD16 <---------ANAC58                       <--   --------->ATERF1(1)                   <---------LBD16  <---------------AtSPL8 ----------->RAV1(1)-  <---------ATERF1(1)           --------->ARR14(2)   --------->WRKY12   <---------ZAT14     --------- ----------->HVH21              <---------ARR14(2)   --------->WRKY38(1)--------->ZAT14    --------->ICU4 -------->ATERF1(1)         --------->At4g35610  <-----------------------TaNAC69(2) ---------->DOF2-- --------ATERF1(1)     ---------->DOF2----------->HVH21  ------>ZmHOX2a(2) ---------->CDC5 <---------ATHB12   gagacgacggcggaggttgaaaggggaaagagcagaaatggtgaccggagaagcgttgatcgcgtacagagcactgctcagggcaacaaagaaatcattc  23238800                                        --------->LBD16                                      ------>ZmHOX2a(2)                                      <-------TEIL                                      <-----------------------TaNAC69(2)                                     <------ZmHOX2a(2)                                    --------->AGP1                                    --------->ARR14(2)                                    <---------ARR11(3)                                    <---------ARR14(2)                                   --------->GLK1(1)                                <---------TOE2(1)                                <---------TOE1(1)                               --------->SPL7                              <------NtERF2                           <---------ANAC58                             <---------SPL7                           <---------ANAC46                             <-----------HVH21                        <---------ANAC58           <---                             ------>NtERF2 --------->ANAC58      --------->TGA1a          --------->ANAC58    <---------ARR14(2)      --------->DEAR3(1)                   --------->O2             --------->ANAC58    --------->ARR14(2)      <---------ANAC58                     <---------TGA1a   --------->bZIP60(1) <------NtERF2              <---------ANAC58              --------->ARR14(2)       <---------bZIP60(1) -------LBD16            <---------DEAR3(1)--------->ANAC58      <---------O2    ----------->RAV1(1) -------->LBD16      <---------HSFC1(2)<---------ANAC55(2)--------->GLK1(2)      ------>NtERF2   ---- >ATHB12             --------->HSFC1(2)--------->ANAC55(2)<---------ARR14(2)    <---------ETT(1) <--- ------->DEAR3(1) ---------->DOF2  <---------GLK1(1)     <---------GLK1(2)      --------->ANAC46 ----   gccggagataccgagatgctaaaagcttcggcgtccgagatccgtaagaaattcgaagagaatcgcctcgtggcttctaactccgacatcactcgccttc  23238900                                                                       --------->CCA1(2)                                                                      --------->ARR14(2)              --------->DEAR3(2)                                      <---------ARR14(2)           --------->REM1(2)                                        <---------MYB46(3)          ----------->HVH21                                        <---------ANAC46        <---------ANAC58                                          <---------LBD16        <------NtERF2                                             <------NtERF2        <---------ANAC46                                          ------>NtERF2        <---------ANAC58                                         <---------ATERF1(1)       ------>NtERF2                                            <---------DEAR3(1)      <---------ANAC46                                       ------->TEIL      <---------ANAC58                                     ------->GAMYB                            <      <---------ANAC58                                    <---------MYB52(2)                        < ------HSFC1(1)                             <-----------RAV1(2)<---------LBD16                  <---- ----->HSFB2a(2)  --------->ANAC58      ------>ZmHOX2a(2) --------->MYB46(3)  --------->MYB52(2)<---- ------HSFB2a(2)  --------->ANAC58    <---------ARR11(3)--------->MYB52(1)   <-------TEIL    <------- ----->HSFC1(1)----------->HVH21    <---------YAB1   --------->ANAC46<------NtERF2       <----------DOF2   tagaagaggcgcgtgaagcgacgcagttcatttccaccatgatcgtccaggctaaactcaacgaacgcggcggatatggttcgttctgactctttttatc  23239000  Previous    Next  AGI:  At3g62800.1    Description:  DRB4 (double-stranded RNA-binding domain (DsRBD)-containing protein 4); double-stranded RNA binding. similar to DRB3 (DSRNA-BINDING PROTEIN 3), double-stranded RNA binding [Arabidopsis thaliana] (TAIR:AT3G26932.1); similar to DRB3 (DSRNA-BINDING PROTEIN 3), double-stranded RNA binding [Arabidopsis thaliana] (TAIR:AT3G26932.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO42974.1); contains InterPro domain Double-stranded RNA-binding-like; (InterPro:IPR014720); contains InterPro domain Double-stranded RNA binding; (InterPro:IPR001159) Range:  from: 23236567    to: 23238487    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g62810.1    Description:  complex 1 family protein / LVR family protein. similar to unknown [Picea sitchensis] (GB:ABK24187.1); contains InterPro domain Complex 1 LYR protein (InterPro:IPR008011) Range:  from: 23238657    to: 23239373    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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